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Items: 26

1.

Repeatability, reproducibility and consistency of horse shape data and its association with linearly described conformation traits in Franches-Montagnes stallions.

Gmel AI, Druml T, Portele K, von Niederhäusern R, Neuditschko M.

PLoS One. 2018 Aug 27;13(8):e0202931. doi: 10.1371/journal.pone.0202931. eCollection 2018.

2.

Novel insights into Sabino1 and splashed white coat color patterns in horses.

Druml T, Grilz-Seger G, Neuditschko M, Horna M, Ricard A, Pausch H, Brem G.

Anim Genet. 2018 Jun;49(3):249-253. doi: 10.1111/age.12657. Epub 2018 Apr 10.

3.

Asian horses deepen the MSY phylogeny.

Felkel S, Vogl C, Rigler D, Jagannathan V, Leeb T, Fries R, Neuditschko M, Rieder S, Velie B, Lindgren G, Rubin CJ, Schlötterer C, Rattei T, Brem G, Wallner B.

Anim Genet. 2018 Feb;49(1):90-93. doi: 10.1111/age.12635. Epub 2018 Jan 15.

PMID:
29333704
4.

Population Networks Associated with Runs of Homozygosity Reveal New Insights into the Breeding History of the Haflinger Horse.

Druml T, Neuditschko M, Grilz-Seger G, Horna M, Ricard A, Mesaric M, Cotman M, Pausch H, Brem G.

J Hered. 2018 May 11;109(4):384-392. doi: 10.1093/jhered/esx114.

PMID:
29294044
5.

Population structure and genomic inbreeding in nine Swiss dairy cattle populations.

Signer-Hasler H, Burren A, Neuditschko M, Frischknecht M, Garrick D, Stricker C, Gredler B, Bapst B, Flury C.

Genet Sel Evol. 2017 Nov 7;49(1):83. doi: 10.1186/s12711-017-0358-6.

6.

Genome-wide scans between two honeybee populations reveal putative signatures of human-mediated selection.

Parejo M, Wragg D, Henriques D, Vignal A, Neuditschko M.

Anim Genet. 2017 Dec;48(6):704-707. doi: 10.1111/age.12599. Epub 2017 Sep 4.

7.

A genome-wide association study for equine recurrent airway obstruction in European Warmblood horses reveals a suggestive new quantitative trait locus on chromosome 13.

Schnider D, Rieder S, Leeb T, Gerber V, Neuditschko M.

Anim Genet. 2017 Dec;48(6):691-693. doi: 10.1111/age.12583. Epub 2017 Jul 24.

PMID:
28737212
8.

Y Chromosome Uncovers the Recent Oriental Origin of Modern Stallions.

Wallner B, Palmieri N, Vogl C, Rigler D, Bozlak E, Druml T, Jagannathan V, Leeb T, Fries R, Tetens J, Thaller G, Metzger J, Distl O, Lindgren G, Rubin CJ, Andersson L, Schaefer R, McCue M, Neuditschko M, Rieder S, Schlötterer C, Brem G.

Curr Biol. 2017 Jul 10;27(13):2029-2035.e5. doi: 10.1016/j.cub.2017.05.086. Epub 2017 Jun 29.

9.

Identification of key contributors in complex population structures.

Neuditschko M, Raadsma HW, Khatkar MS, Jonas E, Steinig EJ, Flury C, Signer-Hasler H, Frischknecht M, von Niederhäusern R, Leeb T, Rieder S.

PLoS One. 2017 May 16;12(5):e0177638. doi: 10.1371/journal.pone.0177638. eCollection 2017.

10.

Phenotypic and Genetic Analysis of the Leopard Complex Spotting in Noriker Horses.

Druml T, Grilz-Seger G, Neuditschko M, Neuhauser B, Brem G.

J Hered. 2017 Jul 1;108(5):505-514. doi: 10.1093/jhered/esx039.

PMID:
28453641
11.

Ancient genomic changes associated with domestication of the horse.

Librado P, Gamba C, Gaunitz C, Der Sarkissian C, Pruvost M, Albrechtsen A, Fages A, Khan N, Schubert M, Jagannathan V, Serres-Armero A, Kuderna LFK, Povolotskaya IS, Seguin-Orlando A, Lepetz S, Neuditschko M, Thèves C, Alquraishi S, Alfarhan AH, Al-Rasheid K, Rieder S, Samashev Z, Francfort HP, Benecke N, Hofreiter M, Ludwig A, Keyser C, Marques-Bonet T, Ludes B, Crubézy E, Leeb T, Willerslev E, Orlando L.

Science. 2017 Apr 28;356(6336):442-445. doi: 10.1126/science.aam5298.

PMID:
28450643
12.

A Nonsense Variant in the ST14 Gene in Akhal-Teke Horses with Naked Foal Syndrome.

Bauer A, Hiemesch T, Jagannathan V, Neuditschko M, Bachmann I, Rieder S, Mikko S, Penedo MC, Tarasova N, Vitková M, Sirtori N, Roccabianca P, Leeb T, Welle MM.

G3 (Bethesda). 2017 Apr 3;7(4):1315-1321. doi: 10.1534/g3.117.039511.

13.

Genetic diversity analyses reveal first insights into breed-specific selection signatures within Swiss goat breeds.

Burren A, Neuditschko M, Signer-Hasler H, Frischknecht M, Reber I, Menzi F, Drögemüller C, Flury C.

Anim Genet. 2016 Dec;47(6):727-739. doi: 10.1111/age.12476. Epub 2016 Jul 20.

PMID:
27436146
14.

Association between population structure and allele frequencies of the glycogen synthase 1 mutation in the Austrian Noriker draft horse.

Druml T, Grilz-Seger G, Neuditschko M, Brem G.

Anim Genet. 2017 Feb;48(1):108-112. doi: 10.1111/age.12481. Epub 2016 Aug 1.

PMID:
27476720
15.

Selection signatures in Shetland ponies.

Frischknecht M, Flury C, Leeb T, Rieder S, Neuditschko M.

Anim Genet. 2016 Jun;47(3):370-2. doi: 10.1111/age.12416. Epub 2016 Feb 9.

PMID:
26857482
16.

Genome-wide association studies based on sequence-derived genotypes reveal new QTL associated with conformation and performance traits in the Franches-Montagnes horse breed.

Frischknecht M, Signer-Hasler H, Leeb T, Rieder S, Neuditschko M.

Anim Genet. 2016 Apr;47(2):227-9. doi: 10.1111/age.12406. Epub 2016 Jan 14.

PMID:
26767322
17.

Tracking the origins of Yakutian horses and the genetic basis for their fast adaptation to subarctic environments.

Librado P, Der Sarkissian C, Ermini L, Schubert M, Jónsson H, Albrechtsen A, Fumagalli M, Yang MA, Gamba C, Seguin-Orlando A, Mortensen CD, Petersen B, Hoover CA, Lorente-Galdos B, Nedoluzhko A, Boulygina E, Tsygankova S, Neuditschko M, Jagannathan V, Thèves C, Alfarhan AH, Alquraishi SA, Al-Rasheid KA, Sicheritz-Ponten T, Popov R, Grigoriev S, Alekseev AN, Rubin EM, McCue M, Rieder S, Leeb T, Tikhonov A, Crubézy E, Slatkin M, Marques-Bonet T, Nielsen R, Willerslev E, Kantanen J, Prokhortchouk E, Orlando L.

Proc Natl Acad Sci U S A. 2015 Dec 15;112(50):E6889-97. doi: 10.1073/pnas.1513696112. Epub 2015 Nov 23.

18.

Prospects and challenges for the conservation of farm animal genomic resources, 2015-2025.

Bruford MW, Ginja C, Hoffmann I, Joost S, Orozco-terWengel P, Alberto FJ, Amaral AJ, Barbato M, Biscarini F, Colli L, Costa M, Curik I, Duruz S, Ferenčaković M, Fischer D, Fitak R, Groeneveld LF, Hall SJ, Hanotte O, Hassan FU, Helsen P, Iacolina L, Kantanen J, Leempoel K, Lenstra JA, Ajmone-Marsan P, Masembe C, Megens HJ, Miele M, Neuditschko M, Nicolazzi EL, Pompanon F, Roosen J, Sevane N, Smetko A, Štambuk A, Streeter I, Stucki S, Supakorn C, Telo Da Gama L, Tixier-Boichard M, Wegmann D, Zhan X.

Front Genet. 2015 Oct 21;6:314. doi: 10.3389/fgene.2015.00314. eCollection 2015.

19.

A Non-Synonymous HMGA2 Variant Decreases Height in Shetland Ponies and Other Small Horses.

Frischknecht M, Jagannathan V, Plattet P, Neuditschko M, Signer-Hasler H, Bachmann I, Pacholewska A, Drögemüller C, Dietschi E, Flury C, Rieder S, Leeb T.

PLoS One. 2015 Oct 16;10(10):e0140749. doi: 10.1371/journal.pone.0140749. eCollection 2015.

20.

Evolutionary Genomics and Conservation of the Endangered Przewalski's Horse.

Der Sarkissian C, Ermini L, Schubert M, Yang MA, Librado P, Fumagalli M, Jónsson H, Bar-Gal GK, Albrechtsen A, Vieira FG, Petersen B, Ginolhac A, Seguin-Orlando A, Magnussen K, Fages A, Gamba C, Lorente-Galdos B, Polani S, Steiner C, Neuditschko M, Jagannathan V, Feh C, Greenblatt CL, Ludwig A, Abramson NI, Zimmermann W, Schafberg R, Tikhonov A, Sicheritz-Ponten T, Willerslev E, Marques-Bonet T, Ryder OA, McCue M, Rieder S, Leeb T, Slatkin M, Orlando L.

Curr Biol. 2015 Oct 5;25(19):2577-83. doi: 10.1016/j.cub.2015.08.032. Epub 2015 Sep 24.

21.

netview p: a network visualization tool to unravel complex population structure using genome-wide SNPs.

Steinig EJ, Neuditschko M, Khatkar MS, Raadsma HW, Zenger KR.

Mol Ecol Resour. 2016 Jan;16(1):216-27. doi: 10.1111/1755-0998.12442. Epub 2015 Jul 24.

PMID:
26129944
22.

A chromosomal region on ECA13 is associated with maxillary prognathism in horses.

Signer-Hasler H, Neuditschko M, Koch C, Froidevaux S, Flury C, Burger D, Leeb T, Rieder S.

PLoS One. 2014 Jan 21;9(1):e86607. doi: 10.1371/journal.pone.0086607. eCollection 2014.

23.

Imputation of sequence level genotypes in the Franches-Montagnes horse breed.

Frischknecht M, Neuditschko M, Jagannathan V, Drögemüller C, Tetens J, Thaller G, Leeb T, Rieder S.

Genet Sel Evol. 2014 Oct 1;46:63. doi: 10.1186/s12711-014-0063-7.

24.

NetView: a high-definition network-visualization approach to detect fine-scale population structures from genome-wide patterns of variation.

Neuditschko M, Khatkar MS, Raadsma HW.

PLoS One. 2012;7(10):e48375. doi: 10.1371/journal.pone.0048375. Epub 2012 Oct 31.

25.

Genome-wide association mapping of milk production traits in Braunvieh cattle.

Maxa J, Neuditschko M, Russ I, Förster M, Medugorac I.

J Dairy Sci. 2012 Sep;95(9):5357-5364. doi: 10.3168/jds.2011-4673.

PMID:
22916942
26.

Assignment of chromosomal locations for unassigned SNPs/scaffolds based on pair-wise linkage disequilibrium estimates.

Khatkar MS, Hobbs M, Neuditschko M, Sölkner J, Nicholas FW, Raadsma HW.

BMC Bioinformatics. 2010 Apr 7;11:171. doi: 10.1186/1471-2105-11-171.

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