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Items: 1 to 50 of 167

1.

Figure Correction: Digital Pain Drawings Can Improve Doctors' Understanding of Acute Pain Patients: Survey and Pain Drawing Analysis.

Shaballout N, Aloumar A, Neubert TA, Dusch M, Beissner F.

JMIR Mhealth Uhealth. 2019 Sep 27;7(9):e16017. doi: 10.2196/16017.

2.

From Paper to Digital Applications of the Pain Drawing: Systematic Review of Methodological Milestones.

Shaballout N, Neubert TA, Boudreau S, Beissner F.

JMIR Mhealth Uhealth. 2019 Sep 5;7(9):e14569. doi: 10.2196/14569. Review.

3.

Vezatin is required for the maturation of the neuromuscular synapse.

Koppel N, Friese MB, Cardasis HL, Neubert TA, Burden SJ.

Mol Biol Cell. 2019 Sep 15;30(20):2571-2583. doi: 10.1091/mbc.E19-06-0313. Epub 2019 Aug 14.

PMID:
31411944
4.

Haploinsufficiency in the ANKS1B gene encoding AIDA-1 leads to a neurodevelopmental syndrome.

Carbonell AU, Cho CH, Tindi JO, Counts PA, Bates JC, Erdjument-Bromage H, Cvejic S, Iaboni A, Kvint I, Rosensaft J, Banne E, Anagnostou E, Neubert TA, Scherer SW, Molholm S, Jordan BA.

Nat Commun. 2019 Aug 6;10(1):3529. doi: 10.1038/s41467-019-11437-w.

5.

Stable Isotope Labeling by Amino Acids in Cell Culture (SILAC) for Quantitative Proteomics.

Hoedt E, Zhang G, Neubert TA.

Adv Exp Med Biol. 2019;1140:531-539. doi: 10.1007/978-3-030-15950-4_31. Review.

PMID:
31347069
6.

Combinatory microRNA serum signatures as classifiers of Parkinson's disease.

Patil KS, Basak I, Dalen I, Hoedt E, Lange J, Lunde KA, Liu Y, Tysnes OB, Forsgren L, Aarsland D, Neubert TA, Larsen JP, Alves G, Møller SG.

Parkinsonism Relat Disord. 2019 Jul;64:202-210. doi: 10.1016/j.parkreldis.2019.04.010. Epub 2019 Apr 11.

PMID:
31003905
7.

Altered steady state and activity-dependent de novo protein expression in fragile X syndrome.

Bowling H, Bhattacharya A, Zhang G, Alam D, Lebowitz JZ, Bohm-Levine N, Lin D, Singha P, Mamcarz M, Puckett R, Zhou L, Aryal S, Sharp K, Kirshenbaum K, Berry-Kravis E, Neubert TA, Klann E.

Nat Commun. 2019 Apr 12;10(1):1710. doi: 10.1038/s41467-019-09553-8.

8.

Extramitochondrial cardiolipin suggests a novel function of mitochondria in spermatogenesis.

Ren M, Xu Y, Erdjument-Bromage H, Donelian A, Phoon CKL, Terada N, Strathdee D, Neubert TA, Schlame M.

J Cell Biol. 2019 May 6;218(5):1491-1502. doi: 10.1083/jcb.201808131. Epub 2019 Mar 26.

PMID:
30914420
9.

Tau antibody chimerization alters its charge and binding, thereby reducing its cellular uptake and efficacy.

Congdon EE, Chukwu JE, Shamir DB, Deng J, Ujla D, Sait HBR, Neubert TA, Kong XP, Sigurdsson EM.

EBioMedicine. 2019 Apr;42:157-173. doi: 10.1016/j.ebiom.2019.03.033. Epub 2019 Mar 22.

10.

MACF1 links Rapsyn to microtubule- and actin-binding proteins to maintain neuromuscular synapses.

Oury J, Liu Y, Töpf A, Todorovic S, Hoedt E, Preethish-Kumar V, Neubert TA, Lin W, Lochmüller H, Burden SJ.

J Cell Biol. 2019 May 6;218(5):1686-1705. doi: 10.1083/jcb.201810023. Epub 2019 Mar 6.

PMID:
30842214
11.

Digital Pain Drawings Can Improve Doctors' Understanding of Acute Pain Patients: Survey and Pain Drawing Analysis.

Shaballout N, Aloumar A, Neubert TA, Dusch M, Beissner F.

JMIR Mhealth Uhealth. 2019 Jan 10;7(1):e11412. doi: 10.2196/11412. Erratum in: JMIR Mhealth Uhealth. 2019 Sep 27;7(9):e16017.

12.

HSP90-incorporating chaperome networks as biosensor for disease-related pathways in patient-specific midbrain dopamine neurons.

Kishinevsky S, Wang T, Rodina A, Chung SY, Xu C, Philip J, Taldone T, Joshi S, Alpaugh ML, Bolaender A, Gutbier S, Sandhu D, Fattahi F, Zimmer B, Shah SK, Chang E, Inda C, Koren J 3rd, Saurat NG, Leist M, Gross SS, Seshan VE, Klein C, Tomishima MJ, Erdjument-Bromage H, Neubert TA, Henrickson RC, Chiosis G, Studer L.

Nat Commun. 2018 Oct 19;9(1):4345. doi: 10.1038/s41467-018-06486-6.

13.

Quantitative Comparison of Proteomes Using SILAC.

Deng J, Erdjument-Bromage H, Neubert TA.

Curr Protoc Protein Sci. 2019 Feb;95(1):e74. doi: 10.1002/cpps.74. Epub 2018 Sep 20. Review.

PMID:
30238645
14.

Dppa2/4 Facilitate Epigenetic Remodeling during Reprogramming to Pluripotency.

Hernandez C, Wang Z, Ramazanov B, Tang Y, Mehta S, Dambrot C, Lee YW, Tessema K, Kumar I, Astudillo M, Neubert TA, Guo S, Ivanova NB.

Cell Stem Cell. 2018 Sep 6;23(3):396-411.e8. doi: 10.1016/j.stem.2018.08.001. Epub 2018 Aug 23.

15.

The vimentin intermediate filament network restrains regulatory T cell suppression of graft-versus-host disease.

McDonald-Hyman C, Muller JT, Loschi M, Thangavelu G, Saha A, Kumari S, Reichenbach DK, Smith MJ, Zhang G, Koehn BH, Lin J, Mitchell JS, Fife BT, Panoskaltsis-Mortari A, Feser CJ, Kirchmeier AK, Osborn MJ, Hippen KL, Kelekar A, Serody JS, Turka LA, Munn DH, Chi H, Neubert TA, Dustin ML, Blazar BR.

J Clin Invest. 2018 Oct 1;128(10):4604-4621. doi: 10.1172/JCI95713. Epub 2018 Aug 14.

16.

Unveiling Brain Aβ Heterogeneity Through Targeted Proteomic Analysis.

Rostagno A, Neubert TA, Ghiso J.

Methods Mol Biol. 2018;1779:23-43. doi: 10.1007/978-1-4939-7816-8_3.

17.

Designing a Tablet-Based Software App for Mapping Bodily Symptoms: Usability Evaluation and Reproducibility Analysis.

Neubert TA, Dusch M, Karst M, Beissner F.

JMIR Mhealth Uhealth. 2018 May 30;6(5):e127. doi: 10.2196/mhealth.8409.

18.

Communicating the nutritional value of sugar in Drosophila.

Abu F, Wang JG, Oh Y, Deng J, Neubert TA, Suh GSB.

Proc Natl Acad Sci U S A. 2018 Mar 20;115(12):E2829-E2838. doi: 10.1073/pnas.1719827115. Epub 2018 Mar 5.

19.

Sample Preparation for Relative Quantitation of Proteins Using Tandem Mass Tags (TMT) and Mass Spectrometry (MS).

Erdjument-Bromage H, Huang FK, Neubert TA.

Methods Mol Biol. 2018;1741:135-149. doi: 10.1007/978-1-4939-7659-1_11.

20.

Metabolomic Analysis of Glioma Cells Using Nanoflow Liquid Chromatography-Tandem Mass Spectrometry.

Deng J, Zhang G, Neubert TA.

Methods Mol Biol. 2018;1741:125-134. doi: 10.1007/978-1-4939-7659-1_10.

PMID:
29392696
21.

A Non-canonical BCOR-PRC1.1 Complex Represses Differentiation Programs in Human ESCs.

Wang Z, Gearhart MD, Lee YW, Kumar I, Ramazanov B, Zhang Y, Hernandez C, Lu AY, Neuenkirchen N, Deng J, Jin J, Kluger Y, Neubert TA, Bardwell VJ, Ivanova NB.

Cell Stem Cell. 2018 Feb 1;22(2):235-251.e9. doi: 10.1016/j.stem.2017.12.002. Epub 2018 Jan 11.

22.

Low-Grade Astrocytoma Mutations in IDH1, P53, and ATRX Cooperate to Block Differentiation of Human Neural Stem Cells via Repression of SOX2.

Modrek AS, Golub D, Khan T, Bready D, Prado J, Bowman C, Deng J, Zhang G, Rocha PP, Raviram R, Lazaris C, Stafford JM, LeRoy G, Kader M, Dhaliwal J, Bayin NS, Frenster JD, Serrano J, Chiriboga L, Baitalmal R, Nanjangud G, Chi AS, Golfinos JG, Wang J, Karajannis MA, Bonneau RA, Reinberg D, Tsirigos A, Zagzag D, Snuderl M, Skok JA, Neubert TA, Placantonakis DG.

Cell Rep. 2017 Oct 31;21(5):1267-1280. doi: 10.1016/j.celrep.2017.10.009.

23.

A novel requirement for DROSHA in maintenance of mammalian CG methylation.

Stathopoulou A, Chhetri JB, Ambrose JC, Estève PO, Ji L, Erdjument-Bromage H, Zhang G, Neubert TA, Pradhan S, Herrero J, Schmitz RJ, Ooi SKT.

Nucleic Acids Res. 2017 Sep 19;45(16):9810. doi: 10.1093/nar/gkx736. No abstract available.

24.

A novel requirement for DROSHA in maintenance of mammalian CG methylation.

Stathopoulou A, Chhetri JB, Ambrose JC, Estève PO, Ji L, Erdjument-Bromage H, Zhang G, Neubert TA, Pradhan S, Herrero J, Schmitz RJ, Ooi SKT.

Nucleic Acids Res. 2017 Sep 19;45(16):9398-9412. doi: 10.1093/nar/gkx695.

25.

Enhanced exosome secretion in Down syndrome brain - a protective mechanism to alleviate neuronal endosomal abnormalities.

Gauthier SA, Pérez-González R, Sharma A, Huang FK, Alldred MJ, Pawlik M, Kaur G, Ginsberg SD, Neubert TA, Levy E.

Acta Neuropathol Commun. 2017 Aug 29;5(1):65. doi: 10.1186/s40478-017-0466-0.

26.

Uncoupling the Mitogenic and Metabolic Functions of FGF1 by Tuning FGF1-FGF Receptor Dimer Stability.

Huang Z, Tan Y, Gu J, Liu Y, Song L, Niu J, Zhao L, Srinivasan L, Lin Q, Deng J, Li Y, Conklin DJ, Neubert TA, Cai L, Li X, Mohammadi M.

Cell Rep. 2017 Aug 15;20(7):1717-1728. doi: 10.1016/j.celrep.2017.06.063.

27.

Extracellular phosphorylation of a receptor tyrosine kinase controls synaptic localization of NMDA receptors and regulates pathological pain.

Hanamura K, Washburn HR, Sheffler-Collins SI, Xia NL, Henderson N, Tillu DV, Hassler S, Spellman DS, Zhang G, Neubert TA, Price TJ, Dalva MB.

PLoS Biol. 2017 Jul 18;15(7):e2002457. doi: 10.1371/journal.pbio.2002457. eCollection 2017 Jul.

28.

Aβ truncated species: Implications for brain clearance mechanisms and amyloid plaque deposition.

Cabrera E, Mathews P, Mezhericher E, Beach TG, Deng J, Neubert TA, Rostagno A, Ghiso J.

Biochim Biophys Acta Mol Basis Dis. 2018 Jan;1864(1):208-225. doi: 10.1016/j.bbadis.2017.07.005. Epub 2017 Jul 13.

29.

Endothelium-Independent Primitive Myxoid Vascularization Creates Invertebrate-Like Channels to Maintain Blood Supply in Optic Gliomas.

Snuderl M, Zhang G, Wu P, Jennings TS, Shroff S, Ortenzi V, Jain R, Cohen B, Reidy JJ, Dushay MS, Wisoff JH, Harter DH, Karajannis MA, Fenyo D, Neubert TA, Zagzag D.

Am J Pathol. 2017 Aug;187(8):1867-1878. doi: 10.1016/j.ajpath.2017.04.004. Epub 2017 Jun 9.

30.

Elucidation of a four-site allosteric network in fibroblast growth factor receptor tyrosine kinases.

Chen H, Marsiglia WM, Cho MK, Huang Z, Deng J, Blais SP, Gai W, Bhattacharya S, Neubert TA, Traaseth NJ, Mohammadi M.

Elife. 2017 Feb 6;6. pii: e21137. doi: 10.7554/eLife.21137.

31.

Deep Coverage of Global Protein Expression and Phosphorylation in Breast Tumor Cell Lines Using TMT 10-plex Isobaric Labeling.

Huang FK, Zhang G, Lawlor K, Nazarian A, Philip J, Tempst P, Dephoure N, Neubert TA.

J Proteome Res. 2017 Mar 3;16(3):1121-1132. doi: 10.1021/acs.jproteome.6b00374. Epub 2017 Feb 3.

32.

ABRF Proteome Informatics Research Group (iPRG) 2015 Study: Detection of Differentially Abundant Proteins in Label-Free Quantitative LC-MS/MS Experiments.

Choi M, Eren-Dogu ZF, Colangelo C, Cottrell J, Hoopmann MR, Kapp EA, Kim S, Lam H, Neubert TA, Palmblad M, Phinney BS, Weintraub ST, MacLean B, Vitek O.

J Proteome Res. 2017 Feb 3;16(2):945-957. doi: 10.1021/acs.jproteome.6b00881. Epub 2017 Jan 3.

PMID:
27990823
33.

4E-BP is a target of the GCN2-ATF4 pathway during Drosophila development and aging.

Kang MJ, Vasudevan D, Kang K, Kim K, Park JE, Zhang N, Zeng X, Neubert TA, Marr MT 2nd, Ryoo HD.

J Cell Biol. 2017 Jan 2;216(1):115-129. doi: 10.1083/jcb.201511073. Epub 2016 Dec 15.

34.

Subcellular Parkinson's Disease-Specific Alpha-Synuclein Species Show Altered Behavior in Neurodegeneration.

Abdullah R, Patil KS, Rosen B, Pal R, Prabhudesai S, Lee S, Basak I, Hoedt E, Yang P, Panick K, Ho HP, Chang E, Tzoulis C, Larsen JP, Neubert TA, Alves G, Møller SG.

Mol Neurobiol. 2017 Dec;54(10):7639-7655. doi: 10.1007/s12035-016-0266-8. Epub 2016 Nov 11.

PMID:
27837450
35.

Cytoplasmic, full length and novel cleaved variant, TBLR1 reduces apoptosis in prostate cancer under androgen deprivation.

Daniels G, Zhang X, Zhong X, Santiago L, Wang LH, Wu X, Zhang JY, Liang F, Li X, Neubert TA, Steinke L, Shen Y, Basch R, Schneider R, Levy DE, Lee P.

Oncotarget. 2016 Jun 28;7(26):39556-39571. doi: 10.18632/oncotarget.9005.

36.

In vivo Differential Brain Clearance and Catabolism of Monomeric and Oligomeric Alzheimer's Aβ protein.

McIntee FL, Giannoni P, Blais S, Sommer G, Neubert TA, Rostagno A, Ghiso J.

Front Aging Neurosci. 2016 Sep 27;8:223. eCollection 2016.

37.

Loss of protein association causes cardiolipin degradation in Barth syndrome.

Xu Y, Phoon CK, Berno B, D'Souza K, Hoedt E, Zhang G, Neubert TA, Epand RM, Ren M, Schlame M.

Nat Chem Biol. 2016 Aug;12(8):641-7. doi: 10.1038/nchembio.2113. Epub 2016 Jun 27.

38.

Comparative pathobiology of β-amyloid and the unique susceptibility of humans to Alzheimer's disease.

Rosen RF, Tomidokoro Y, Farberg AS, Dooyema J, Ciliax B, Preuss TM, Neubert TA, Ghiso JA, LeVine H 3rd, Walker LC.

Neurobiol Aging. 2016 Aug;44:185-196. doi: 10.1016/j.neurobiolaging.2016.04.019. Epub 2016 May 2.

39.

Two FGF Receptor Kinase Molecules Act in Concert to Recruit and Transphosphorylate Phospholipase Cγ.

Huang Z, Marsiglia WM, Basu Roy U, Rahimi N, Ilghari D, Wang H, Chen H, Gai W, Blais S, Neubert TA, Mansukhani A, Traaseth NJ, Li X, Mohammadi M.

Mol Cell. 2016 Jan 7;61(1):98-110. doi: 10.1016/j.molcel.2015.11.010. Epub 2015 Dec 10. Erratum in: Mol Cell. 2016 Jan 21;61(2):324.

40.

Sorbs1 and -2 Interact with CrkL and Are Required for Acetylcholine Receptor Cluster Formation.

Hallock PT, Chin S, Blais S, Neubert TA, Glass DJ.

Mol Cell Biol. 2015 Nov 2;36(2):262-70. doi: 10.1128/MCB.00775-15. Print 2016 Jan 15.

41.

The ABRF Metabolomics Research Group 2013 Study: Investigation of Spiked Compound Differences in a Human Plasma Matrix.

Cheema AK, Asara JM, Wang Y, Neubert TA, Tolstikov V, Turck CW.

J Biomol Tech. 2015 Sep;26(3):83-9. doi: 10.7171/jbt.15-2603-001.

42.

Edaravone leads to proteome changes indicative of neuronal cell protection in response to oxidative stress.

Jami MS, Salehi-Najafabadi Z, Ahmadinejad F, Hoedt E, Chaleshtori MH, Ghatrehsamani M, Neubert TA, Larsen JP, Møller SG.

Neurochem Int. 2015 Nov;90:134-41. doi: 10.1016/j.neuint.2015.07.024. Epub 2015 Jul 29.

43.

BONLAC: A combinatorial proteomic technique to measure stimulus-induced translational profiles in brain slices.

Bowling H, Bhattacharya A, Zhang G, Lebowitz JZ, Alam D, Smith PT, Kirshenbaum K, Neubert TA, Vogel C, Chao MV, Klann E.

Neuropharmacology. 2016 Jan;100:76-89. doi: 10.1016/j.neuropharm.2015.07.017. Epub 2015 Jul 21.

44.

Analysis of Electroblotted Proteins by Mass Spectrometry.

Luque-Garcia JL, Neubert TA.

Methods Mol Biol. 2015;1314:243-53. doi: 10.1007/978-1-4939-2718-0_25.

45.

Sequential Amyloid-β Degradation by the Matrix Metalloproteases MMP-2 and MMP-9.

Hernandez-Guillamon M, Mawhirt S, Blais S, Montaner J, Neubert TA, Rostagno A, Ghiso J.

J Biol Chem. 2015 Jun 12;290(24):15078-91. doi: 10.1074/jbc.M114.610931. Epub 2015 Apr 20.

46.

Identification of protein N-termini using TMPP or dimethyl labeling and mass spectrometry.

Deng J, Zhang G, Huang FK, Neubert TA.

Methods Mol Biol. 2015;1295:249-58. doi: 10.1007/978-1-4939-2550-6_19.

47.

Large-Scale Interlaboratory Study to Develop, Analytically Validate and Apply Highly Multiplexed, Quantitative Peptide Assays to Measure Cancer-Relevant Proteins in Plasma.

Abbatiello SE, Schilling B, Mani DR, Zimmerman LJ, Hall SC, MacLean B, Albertolle M, Allen S, Burgess M, Cusack MP, Gosh M, Hedrick V, Held JM, Inerowicz HD, Jackson A, Keshishian H, Kinsinger CR, Lyssand J, Makowski L, Mesri M, Rodriguez H, Rudnick P, Sadowski P, Sedransk N, Shaddox K, Skates SJ, Kuhn E, Smith D, Whiteaker JR, Whitwell C, Zhang S, Borchers CH, Fisher SJ, Gibson BW, Liebler DC, MacCoss MJ, Neubert TA, Paulovich AG, Regnier FE, Tempst P, Carr SA.

Mol Cell Proteomics. 2015 Sep;14(9):2357-74. doi: 10.1074/mcp.M114.047050. Epub 2015 Feb 18.

48.

DFG-out mode of inhibition by an irreversible type-1 inhibitor capable of overcoming gate-keeper mutations in FGF receptors.

Huang Z, Tan L, Wang H, Liu Y, Blais S, Deng J, Neubert TA, Gray NS, Li X, Mohammadi M.

ACS Chem Biol. 2015 Jan 16;10(1):299-309. doi: 10.1021/cb500674s. Epub 2014 Oct 27.

49.

γCaMKII shuttles Ca²⁺/CaM to the nucleus to trigger CREB phosphorylation and gene expression.

Ma H, Groth RD, Cohen SM, Emery JF, Li B, Hoedt E, Zhang G, Neubert TA, Tsien RW.

Cell. 2014 Oct 9;159(2):281-94. doi: 10.1016/j.cell.2014.09.019.

50.

Overview of peptide and protein analysis by mass spectrometry.

Zhang G, Annan RS, Carr SA, Neubert TA.

Curr Protoc Mol Biol. 2014 Oct 1;108:10.21.1-30. doi: 10.1002/0471142727.mb1021s108.

PMID:
25271712

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