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Items: 1 to 50 of 62

1.

Sequencing and analysis of globally obtained human parainfluenza viruses 1 and 3 genomes.

Bose ME, Shrivastava S, He J, Nelson MI, Bera J, Fedorova N, Halpin R, Town CD, Lorenzi HA, Amedeo P, Gupta N, Noyola DE, Videla C, Kok T, Buys A, Venter M, Vabret A, Cordey S, Henrickson KJ.

PLoS One. 2019 Jul 18;14(7):e0220057. doi: 10.1371/journal.pone.0220057. eCollection 2019.

2.

Characterization of swine-origin H1N1 canine influenza viruses.

Wang G, Dos Anjos Borges LG, Stadlbauer D, Ramos I, Bermúdez González MC, He J, Ding Y, Wei Z, Ouyang K, Huang W, Simon V, Fernandez-Sesma A, Krammer F, Nelson MI, Chen Y, García-Sastre A.

Emerg Microbes Infect. 2019;8(1):1017-1026. doi: 10.1080/22221751.2019.1637284.

PMID:
31287780
3.

Human Influenza A Virus Hemagglutinin Glycan Evolution Follows a Temporal Pattern to a Glycan Limit.

Altman MO, Angel M, Košík I, Trovão NS, Zost SJ, Gibbs JS, Casalino L, Amaro RE, Hensley SE, Nelson MI, Yewdell JW.

MBio. 2019 Apr 2;10(2). pii: e00204-19. doi: 10.1128/mBio.00204-19.

4.

Evolution of rotavirus C in humans and several domestic animal species.

Trovão NS, Shepherd FK, Herzberg K, Jarvis MC, Lam HC, Rovira A, Culhane MR, Nelson MI, Marthaler DG.

Zoonoses Public Health. 2019 Aug;66(5):546-557. doi: 10.1111/zph.12575. Epub 2019 Mar 7.

PMID:
30848076
5.

Human-Origin Influenza A(H3N2) Reassortant Viruses in Swine, Southeast Mexico.

Nelson MI, Souza CK, Trovão NS, Diaz A, Mena I, Rovira A, Vincent AL, Torremorell M, Marthaler D, Culhane MR.

Emerg Infect Dis. 2019 Apr;25(4):691-700. doi: 10.3201/eid2504.180779. Epub 2019 Apr 17.

6.

Origins of the 1918 Pandemic: Revisiting the Swine "Mixing Vessel" Hypothesis.

Nelson MI, Worobey M.

Am J Epidemiol. 2018 Dec 1;187(12):2498-2502. doi: 10.1093/aje/kwy150.

PMID:
30508193
7.

Evidence of a fixed internal gene constellation in influenza A viruses isolated from wild birds in Argentina (2006-2016).

Rimondi A, Gonzalez-Reiche AS, Olivera VS, Decarre J, Castresana GJ, Romano M, Nelson MI, van Bakel H, Pereda AJ, Ferreri L, Geiger G, Perez DR.

Emerg Microbes Infect. 2018 Nov 28;7(1):194. doi: 10.1038/s41426-018-0190-2.

8.

Fogarty International Center collaborative networks in infectious disease modeling: Lessons learnt in research and capacity building.

Nelson MI, Lloyd-Smith JO, Simonsen L, Rambaut A, Holmes EC, Chowell G, Miller MA, Spiro DJ, Grenfell B, Viboud C.

Epidemics. 2019 Mar;26:116-127. doi: 10.1016/j.epidem.2018.10.004. Epub 2018 Oct 23. Review.

9.

Genetic Diversity of Noroviruses Circulating in a Pediatric Cohort in Bangladesh.

Nelson MI, Mahfuz M, Chhabra P, Haque R, Seidman JC, Hossain I, McGrath M, Ahmed AMS, Knobler S, Vinjé J, Ahmed T.

J Infect Dis. 2018 Nov 5;218(12):1937-1942. doi: 10.1093/infdis/jiy454.

PMID:
30053045
10.

Emergence and Evolution of Novel Reassortant Influenza A Viruses in Canines in Southern China.

Chen Y, Trovão NS, Wang G, Zhao W, He P, Zhou H, Mo Y, Wei Z, Ouyang K, Huang W, García-Sastre A, Nelson MI.

MBio. 2018 Jun 5;9(3). pii: e00909-18. doi: 10.1128/mBio.00909-18.

11.

The transmission dynamics and diversity of human metapneumovirus in Peru.

Pollett S, Trovão NS, Tan Y, Eden JS, Halpin RA, Bera J, Das SR, Wentworth D, Ocaña V, Mendocilla SM, Álvarez C, Calisto ME, Garcia J, Halsey E, Ampuero JS, Nelson MI, Leguia M.

Influenza Other Respir Viruses. 2018 Jul;12(4):508-513. doi: 10.1111/irv.12537. Epub 2018 Mar 30.

12.

The emergence and evolution of influenza A (H1α) viruses in swine in Canada and the United States.

Nelson MI, Culhane MR, Trovão NS, Patnayak DP, Halpin RA, Lin X, Shilts MH, Das SR, Detmer SE.

J Gen Virol. 2017 Nov;98(11):2663-2675. doi: 10.1099/jgv.0.000924. Epub 2017 Oct 23.

13.

Pandemic (H1N1) 2009 influenza A virus infection associated with respiratory signs in sloth bears (Melursus ursinus).

Boedeker NC, Nelson MI, Killian ML, Torchetti MK, Barthel T, Murray S.

Zoonoses Public Health. 2017 Nov;64(7):566-571. doi: 10.1111/zph.12370. Epub 2017 Jun 23.

PMID:
28646559
14.

Evidence of Intercontinental Spread and Uncommon Variants of Low-Pathogenicity Avian Influenza Viruses in Ducks Overwintering in Guatemala.

Gonzalez-Reiche AS, Nelson MI, Angel M, Müller ML, Ortiz L, Dutta J, van Bakel H, Cordon-Rosales C, Perez DR.

mSphere. 2017 Apr 5;2(2). pii: e00362-16. doi: 10.1128/mSphere.00362-16. eCollection 2017 Mar-Apr.

15.

Introduction, Evolution, and Dissemination of Influenza A Viruses in Exhibition Swine in the United States during 2009 to 2013.

Nelson MI, Stucker KM, Schobel SA, Trovão NS, Das SR, Dugan VG, Nelson SW, Sreevatsan S, Killian ML, Nolting JM, Wentworth DE, Bowman AS.

J Virol. 2016 Nov 14;90(23):10963-10971. doi: 10.1128/JVI.01457-16. Print 2016 Dec 1.

16.

Origins of the 2009 H1N1 influenza pandemic in swine in Mexico.

Mena I, Nelson MI, Quezada-Monroy F, Dutta J, Cortes-Fernández R, Lara-Puente JH, Castro-Peralta F, Cunha LF, Trovão NS, Lozano-Dubernard B, Rambaut A, van Bakel H, García-Sastre A.

Elife. 2016 Jun 28;5. pii: e16777. doi: 10.7554/eLife.16777.

17.

Reassortment in segmented RNA viruses: mechanisms and outcomes.

McDonald SM, Nelson MI, Turner PE, Patton JT.

Nat Rev Microbiol. 2016 Jul;14(7):448-60. doi: 10.1038/nrmicro.2016.46. Epub 2016 May 23. Review.

18.

The Genetic Diversity of Influenza A Viruses in Wild Birds in Peru.

Nelson MI, Pollett S, Ghersi B, Silva M, Simons MP, Icochea E, Gonzalez AE, Segovia K, Kasper MR, Montgomery JM, Bausch DG.

PLoS One. 2016 Jan 19;11(1):e0146059. doi: 10.1371/journal.pone.0146059. eCollection 2016.

19.

Genomic and evolutionary inferences between American and global strains of porcine epidemic diarrhea virus.

Jarvis MC, Lam HC, Zhang Y, Wang L, Hesse RA, Hause BM, Vlasova A, Wang Q, Zhang J, Nelson MI, Murtaugh MP, Marthaler D.

Prev Vet Med. 2016 Jan 1;123:175-184. doi: 10.1016/j.prevetmed.2015.10.020. Epub 2015 Nov 10.

20.

Feasibility and effectiveness of a brief, intensive phylogenetics workshop in a middle-income country.

Pollett S, Leguia M, Nelson MI, Maljkovic Berry I, Rutherford G, Bausch DG, Kasper M, Jarman R, Melendrez M.

Int J Infect Dis. 2016 Jan;42:24-27. doi: 10.1016/j.ijid.2015.11.001. Epub 2015 Nov 10.

21.

Evolutionary Dynamics of Influenza A Viruses in US Exhibition Swine.

Nelson MI, Wentworth DE, Das SR, Sreevatsan S, Killian ML, Nolting JM, Slemons RD, Bowman AS.

J Infect Dis. 2016 Jan 15;213(2):173-82. doi: 10.1093/infdis/jiv399. Epub 2015 Aug 4.

22.

Influenza A Viruses of Human Origin in Swine, Brazil.

Nelson MI, Schaefer R, Gava D, Cantão ME, Ciacci-Zanella JR.

Emerg Infect Dis. 2015 Aug;21(8):1339-47. doi: 10.3201/eid2108.141891.

23.

Phylogeography of Influenza A(H3N2) Virus in Peru, 2010-2012.

Pollett S, Nelson MI, Kasper M, Tinoco Y, Simons M, Romero C, Silva M, Lin X, Halpin RA, Fedorova N, Stockwell TB, Wentworth D, Holmes EC, Bausch DG.

Emerg Infect Dis. 2015 Aug;21(8):1330-8. doi: 10.3201/eid2108.150084.

24.

Transmission dynamics of pandemic influenza A(H1N1)pdm09 virus in humans and swine in backyard farms in Tumbes, Peru.

Tinoco YO, Montgomery JM, Kasper MR, Nelson MI, Razuri H, Guezala MC, Azziz-Baumgartner E, Widdowson MA, Barnes J, Gilman RH, Bausch DG, Gonzalez AE.

Influenza Other Respir Viruses. 2016 Jan;10(1):47-56. doi: 10.1111/irv.12329.

25.

Continual Reintroduction of Human Pandemic H1N1 Influenza A Viruses into Swine in the United States, 2009 to 2014.

Nelson MI, Stratton J, Killian ML, Janas-Martindale A, Vincent AL.

J Virol. 2015 Jun;89(12):6218-26. doi: 10.1128/JVI.00459-15. Epub 2015 Apr 1.

26.

Global migration of influenza A viruses in swine.

Nelson MI, Viboud C, Vincent AL, Culhane MR, Detmer SE, Wentworth DE, Rambaut A, Suchard MA, Holmes EC, Lemey P.

Nat Commun. 2015 Mar 27;6:6696. doi: 10.1038/ncomms7696.

27.

Sequencing and analysis of globally obtained human respiratory syncytial virus A and B genomes.

Bose ME, He J, Shrivastava S, Nelson MI, Bera J, Halpin RA, Town CD, Lorenzi HA, Noyola DE, Falcone V, Gerna G, De Beenhouwer H, Videla C, Kok T, Venter M, Williams JV, Henrickson KJ.

PLoS One. 2015 Mar 20;10(3):e0120098. doi: 10.1371/journal.pone.0120098. eCollection 2015.

28.

Characterization of co-circulating swine influenza A viruses in North America and the identification of a novel H1 genetic clade with antigenic significance.

Anderson TK, Campbell BA, Nelson MI, Lewis NS, Janas-Martindale A, Killian ML, Vincent AL.

Virus Res. 2015 Apr 2;201:24-31. doi: 10.1016/j.virusres.2015.02.009. Epub 2015 Feb 18.

PMID:
25701742
29.

Reverse zoonosis of influenza to swine: new perspectives on the human-animal interface.

Nelson MI, Vincent AL.

Trends Microbiol. 2015 Mar;23(3):142-53. doi: 10.1016/j.tim.2014.12.002. Epub 2015 Jan 4. Review.

30.

Equine influenza A(H3N8) virus isolated from Bactrian camel, Mongolia.

Yondon M, Zayat B, Nelson MI, Heil GL, Anderson BD, Lin X, Halpin RA, McKenzie PP, White SK, Wentworth DE, Gray GC.

Emerg Infect Dis. 2014 Dec;20(12):2144-7. doi: 10.3201/eid2012.140435.

31.

Molecular epidemiology of influenza A/H3N2 viruses circulating in Mexico from 2003 to 2012.

Escalera-Zamudio M, Nelson MI, Cobián Güemes AG, López-Martínez I, Cruz-Ortiz N, Iguala-Vidales M, García ER, Barrera-Badillo G, Díaz-Quiñonez JA, López S, Arias CF, Isa P; Members of Colegio de Pediatría del Estado de Veracruz.

PLoS One. 2014 Jul 30;9(7):e102453. doi: 10.1371/journal.pone.0102453. eCollection 2014.

32.

Introductions and evolution of human-origin seasonal influenza a viruses in multinational swine populations.

Nelson MI, Wentworth DE, Culhane MR, Vincent AL, Viboud C, LaPointe MP, Lin X, Holmes EC, Detmer SE.

J Virol. 2014 Sep 1;88(17):10110-9. doi: 10.1128/JVI.01080-14. Epub 2014 Jun 25.

33.

The evolutionary dynamics of influenza A and B viruses in the tropical city of Managua, Nicaragua.

Nelson MI, Balmaseda A, Kuan G, Saborio S, Lin X, Halpin RA, Stockwell TB, Wentworth DE, Harris E, Gordon A.

Virology. 2014 Aug;462-463:81-90. doi: 10.1016/j.virol.2014.05.025. Epub 2014 Jun 22.

34.

Time spent on daytime direct care activities by personal carers in two Australian residential aged care facilities: a time-motion study.

Qian S, Yu P, Hailey DM, Zhang Z, Davy PJ, Nelson MI.

Aust Health Rev. 2014 May;38(2):230-7. doi: 10.1071/AH13161.

PMID:
24679365
35.

Risks of avian influenza transmission in areas of intensive free-ranging duck production with wild waterfowl.

Cappelle J, Zhao D, Gilbert M, Nelson MI, Newman SH, Takekawa JY, Gaidet N, Prosser DJ, Liu Y, Li P, Shu Y, Xiao X.

Ecohealth. 2014;11(1):109-19. doi: 10.1007/s10393-014-0914-2. Epub 2014 Mar 21.

36.

The role of viral introductions in sustaining community-based HIV epidemics in rural Uganda: evidence from spatial clustering, phylogenetics, and egocentric transmission models.

Grabowski MK, Lessler J, Redd AD, Kagaayi J, Laeyendecker O, Ndyanabo A, Nelson MI, Cummings DA, Bwanika JB, Mueller AC, Reynolds SJ, Munshaw S, Ray SC, Lutalo T, Manucci J, Tobian AA, Chang LW, Beyrer C, Jennings JM, Nalugoda F, Serwadda D, Wawer MJ, Quinn TC, Gray RH; Rakai Health Sciences Program.

PLoS Med. 2014 Mar 4;11(3):e1001610. doi: 10.1371/journal.pmed.1001610. eCollection 2014 Mar.

37.

Emergence of a highly pathogenic avian influenza virus from a low-pathogenic progenitor.

Monne I, Fusaro A, Nelson MI, Bonfanti L, Mulatti P, Hughes J, Murcia PR, Schivo A, Valastro V, Moreno A, Holmes EC, Cattoli G.

J Virol. 2014 Apr;88(8):4375-88. doi: 10.1128/JVI.03181-13. Epub 2014 Feb 5.

38.

Multiyear persistence of 2 pandemic A/H1N1 influenza virus lineages in West Africa.

Nelson MI, Njouom R, Viboud C, Niang MN, Kadjo H, Ampofo W, Adebayo A, Tarnagda Z, Miller MA, Holmes EC, Diop OM.

J Infect Dis. 2014 Jul 1;210(1):121-5. Epub 2014 Jan 19.

39.

Population dynamics of cocirculating swine influenza A viruses in the United States from 2009 to 2012.

Anderson TK, Nelson MI, Kitikoon P, Swenson SL, Korslund JA, Vincent AL.

Influenza Other Respir Viruses. 2013 Dec;7 Suppl 4:42-51. doi: 10.1111/irv.12193.

40.

Genotype patterns of contemporary reassorted H3N2 virus in US swine.

Kitikoon P, Nelson MI, Killian ML, Anderson TK, Koster L, Culhane MR, Vincent AL.

J Gen Virol. 2013 Jun;94(Pt 6):1236-41. doi: 10.1099/vir.0.51839-0.

PMID:
23695819
41.

Contrasting the epidemiological and evolutionary dynamics of influenza spatial transmission.

Viboud C, Nelson MI, Tan Y, Holmes EC.

Philos Trans R Soc Lond B Biol Sci. 2013 Feb 4;368(1614):20120199. doi: 10.1098/rstb.2012.0199. Print 2013 Mar 19. Review.

42.

Genome sequencing and phylogenetic analysis of 39 human parainfluenza virus type 1 strains isolated from 1997-2010.

Beck ET, He J, Nelson MI, Bose ME, Fan J, Kumar S, Henrickson KJ.

PLoS One. 2012;7(9):e46048. doi: 10.1371/journal.pone.0046048. Epub 2012 Sep 27.

43.

Genomic reassortment of influenza A virus in North American swine, 1998-2011.

Nelson MI, Detmer SE, Wentworth DE, Tan Y, Schwartzbard A, Halpin RA, Stockwell TB, Lin X, Vincent AL, Gramer MR, Holmes EC.

J Gen Virol. 2012 Dec;93(Pt 12):2584-9. doi: 10.1099/vir.0.045930-0. Epub 2012 Sep 19.

44.

The importance of the Erk pathway in the development of linker for activation of T cells-mediated autoimmunity.

Fuller DM, Zhu M, Koonpaew S, Nelson MI, Zhang W.

J Immunol. 2012 Oct 15;189(8):4005-13. doi: 10.4049/jimmunol.1201380. Epub 2012 Sep 14.

45.

The work pattern of personal care workers in two Australian nursing homes: a time-motion study.

Qian SY, Yu P, Zhang ZY, Hailey DM, Davy PJ, Nelson MI.

BMC Health Serv Res. 2012 Sep 6;12:305. doi: 10.1186/1472-6963-12-305.

46.

Epidemiological dynamics and phylogeography of influenza virus in southern China.

Cheng X, Tan Y, He M, Lam TT, Lu X, Viboud C, He J, Zhang S, Lu J, Wu C, Fang S, Wang X, Xie X, Ma H, Nelson MI, Kung HF, Holmes EC, Cheng J.

J Infect Dis. 2013 Jan 1;207(1):106-14. doi: 10.1093/infdis/jis526. Epub 2012 Aug 28.

47.

Global transmission of influenza viruses from humans to swine.

Nelson MI, Gramer MR, Vincent AL, Holmes EC.

J Gen Virol. 2012 Oct;93(Pt 10):2195-203. doi: 10.1099/vir.0.044974-0. Epub 2012 Jul 12.

48.

Evolution of novel reassortant A/H3N2 influenza viruses in North American swine and humans, 2009-2011.

Nelson MI, Vincent AL, Kitikoon P, Holmes EC, Gramer MR.

J Virol. 2012 Aug;86(16):8872-8. doi: 10.1128/JVI.00259-12. Epub 2012 Jun 13.

49.

Temporally structured metapopulation dynamics and persistence of influenza A H3N2 virus in humans.

Bahl J, Nelson MI, Chan KH, Chen R, Vijaykrishna D, Halpin RA, Stockwell TB, Lin X, Wentworth DE, Ghedin E, Guan Y, Peiris JS, Riley S, Rambaut A, Holmes EC, Smith GJ.

Proc Natl Acad Sci U S A. 2011 Nov 29;108(48):19359-64. doi: 10.1073/pnas.1109314108. Epub 2011 Nov 14.

50.

Whole genome sequencing and evolutionary analysis of human respiratory syncytial virus A and B from Milwaukee, WI 1998-2010.

Rebuffo-Scheer C, Bose M, He J, Khaja S, Ulatowski M, Beck ET, Fan J, Kumar S, Nelson MI, Henrickson KJ.

PLoS One. 2011;6(10):e25468. doi: 10.1371/journal.pone.0025468. Epub 2011 Oct 6.

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