Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 1 to 50 of 620

1.

Gastro-intestinal and oral microbiome signatures associated with healthy aging.

Singh H, Torralba MG, Moncera KJ, DiLello L, Petrini J, Nelson KE, Pieper R.

Geroscience. 2019 Oct 16. doi: 10.1007/s11357-019-00098-8. [Epub ahead of print]

PMID:
31620923
2.

Interplay between the human gut microbiome and host metabolism.

Visconti A, Le Roy CI, Rosa F, Rossi N, Martin TC, Mohney RP, Li W, de Rinaldis E, Bell JT, Venter JC, Nelson KE, Spector TD, Falchi M.

Nat Commun. 2019 Oct 3;10(1):4505. doi: 10.1038/s41467-019-12476-z.

3.

Gut Microbiome-Based Metagenomic Signature for Non-invasive Detection of Advanced Fibrosis in Human Nonalcoholic Fatty Liver Disease.

Loomba R, Seguritan V, Li W, Long T, Klitgord N, Bhatt A, Dulai PS, Caussy C, Bettencourt R, Highlander SK, Jones MB, Sirlin CB, Schnabl B, Brinkac L, Schork N, Chen CH, Brenner DA, Biggs W, Yooseph S, Venter JC, Nelson KE.

Cell Metab. 2019 Sep 3;30(3):607. doi: 10.1016/j.cmet.2019.08.002. No abstract available.

PMID:
31484056
4.

Collaborative International Research in Clinical and Longitudinal Experience Study in NMOSD.

Cook LJ, Rose JW, Alvey JS, Jolley AM, Kuhn R, Marron B, Pederson M, Enriquez R, Yearley J, McKechnie S, Han MH, Tomczak AJ, Levy M, Mealy MA, Coleman J, Bennett JL, Johnson R, Barnes-Garcia M, Traboulsee AL, Carruthers RL, Lee LE, Schubert JJ, McMullen K, Kister I, Rimler Z, Reid A, Sicotte NL, Planchon SM, Cohen JA, Ivancic D, Sedlak JL, Sand IK, Repovic P, Amezcua L, Pruitt A, Amundson E, Chitnis T, Mullin DS, Klawiter EC, Russo AW, Riley CS, Onomichi KB, Levine L, Nelson KE, Nealon NM, Engel C, Kruse-Hoyer M, Marcille M, Tornes L, Rumpf A, Greer A, Kenneally Behne M, Rodriguez RR, Behne DW, Blackway DW, Coords B, Blaschke TF, Sheard J, Smith TJ, Behne JM, Yeaman MR; Guthy-Jackson Charitable Foundation International Clinical Consortium (GJCF–ICC).

Neurol Neuroimmunol Neuroinflamm. 2019 Jun 28;6(5). pii: e583. doi: 10.1212/NXI.0000000000000583. Print 2019 Sep.

5.

Erratum: Long-term Antibody Persistence After Hepatitis E Virus Infection and Vaccination in Dongtai, China.

Kmush BL, Yu H, Huang S, Zhang X, Wu T, Nelson KE, Labrique AB.

Open Forum Infect Dis. 2019 Aug 1;6(8). pii: ofz224. doi: 10.1093/ofid/ofz224. No abstract available.

6.

Plasticity in the Human Gut Microbiome Defies Evolutionary Constraints.

Gomez A, Sharma AK, Mallott EK, Petrzelkova KJ, Jost Robinson CA, Yeoman CJ, Carbonero F, Pafco B, Rothman JM, Ulanov A, Vlckova K, Amato KR, Schnorr SL, Dominy NJ, Modry D, Todd A, Torralba M, Nelson KE, Burns MB, Blekhman R, Remis M, Stumpf RM, Wilson BA, Gaskins HR, Garber PA, White BA, Leigh SR.

mSphere. 2019 Jul 31;4(4). pii: e00271-19. doi: 10.1128/mSphere.00271-19.

7.

Collaborative International Research in Clinical and Longitudinal Experience Study in NMOSD.

Cook LJ, Rose JW, Alvey JS, Jolley AM, Kuhn R, Marron B, Pederson M, Enriquez R, Yearley J, McKechnie S, Han MH, Tomczak AJ, Levy M, Mealy MA, Coleman J, Bennett JL, Johnson R, Barnes-Garcia M, Traboulsee AL, Carruthers RL, Lee LE, Schubert JJ, McMullen K, Kister I, Rimler Z, Reid A, Sicotte NL, Planchon SM, Cohen JA, Ivancic D, Sedlak JL, Sand IK, Repovic P, Amezcua L, Pruitt A, Amundson E, Chitnis T, Mullin DS, Klawiter EC, Russo AW, Riley CS, Onomichi KB, Levine L, Nelson KE, Nealon NM, Engel C, Kruse-Hoyer M, Marcille M, Tornes L, Rumpf A, Greer A, Kenneally Behne M, Rodriguez RR, Behne DW, Blackway DW, Coords B, Blaschke TF, Sheard J, Smith TJ, Behne JM, Yeaman MR; Guthy-Jackson Charitable Foundation International Clinical Consortium (GJCF–ICC).

Neurol Neuroimmunol Neuroinflamm. 2019 Jun 28;6(5):e583. doi: 10.1212/NXI.0000000000000583. eCollection 2019 Sep.

8.

Gut microbiome composition of wild western lowland gorillas is associated with individual age and sex factors.

Pafčo B, Sharma AK, Petrželková KJ, Vlčková K, Todd A, Yeoman CJ, Wilson BA, Stumpf R, White BA, Nelson KE, Leigh S, Gomez A.

Am J Phys Anthropol. 2019 Jul;169(3):575-585. doi: 10.1002/ajpa.23842. Epub 2019 Apr 25.

PMID:
31025322
9.

Long-term Antibody Persistence After Hepatitis E Virus Infection and Vaccination in Dongtai, China.

Kmush BL, Yu H, Huang S, Zhang X, Wu T, Nelson KE, Labrique AB.

Open Forum Infect Dis. 2019 Mar 28;6(4):ofz144. doi: 10.1093/ofid/ofz144. eCollection 2019 Apr. Erratum in: Open Forum Infect Dis. 2019 Aug 1;6(8):.

10.

Self-Assembled STrap for Global Proteomics and Salivary Biomarker Discovery.

Lin YH, Eguez RV, Torralba MG, Singh H, Golusinski P, Golusinski W, Masternak M, Nelson KE, Freire M, Yu Y.

J Proteome Res. 2019 Apr 5;18(4):1907-1915. doi: 10.1021/acs.jproteome.9b00037. Epub 2019 Mar 21.

PMID:
30848925
11.

An outbreak of HIV infection among people who inject drugs linked to injection of propofol in Taiwan.

Huang YC, Huang YF, Lin MH, Yang JY, Liao YH, Lo HY, Latkin C, Nelson KE.

PLoS One. 2019 Feb 8;14(2):e0210210. doi: 10.1371/journal.pone.0210210. eCollection 2019.

12.

Probable transmission of hepatitis E virus (HEV) via transfusion in the United States.

Ticehurst JR, Pisanic N, Forman MS, Ordak C, Heaney CD, Ong E, Linnen JM, Ness PM, Guo N, Shan H, Nelson KE.

Transfusion. 2019 Mar;59(3):1024-1034. doi: 10.1111/trf.15140. Epub 2019 Jan 31.

PMID:
30702157
13.

Survival and Health Care Use After Feeding Tube Placement in Children With Neurologic Impairment.

Nelson KE, Rosella LC, Mahant S, Cohen E, Guttmann A.

Pediatrics. 2019 Feb;143(2). pii: e20182863. doi: 10.1542/peds.2018-2863.

PMID:
30679378
14.

OMeta: an ontology-based, data-driven metadata tracking system.

Singh I, Kuscuoglu M, Harkins DM, Sutton G, Fouts DE, Nelson KE.

BMC Bioinformatics. 2019 Jan 7;20(1):8. doi: 10.1186/s12859-018-2580-9.

15.

Xylitol and sorbitol effects on the microbiome of saliva and plaque.

Rafeek R, Carrington CVF, Gomez A, Harkins D, Torralba M, Kuelbs C, Addae J, Moustafa A, Nelson KE.

J Oral Microbiol. 2018 Oct 23;11(1):1536181. doi: 10.1080/20002297.2018.1536181. eCollection 2019.

16.

A novel approach for the identification and phylogenetic delineation of human Mycoplasma species and strains using genomic segment sequence analysis.

Roachford OSE, Nelson KE, Mohapatra BR.

Infect Genet Evol. 2019 Mar;68:68-76. doi: 10.1016/j.meegid.2018.12.002. Epub 2018 Dec 4.

PMID:
30529087
17.

Supragingival Plaque Microbiome Ecology and Functional Potential in the Context of Health and Disease.

Espinoza JL, Harkins DM, Torralba M, Gomez A, Highlander SK, Jones MB, Leong P, Saffery R, Bockmann M, Kuelbs C, Inman JM, Hughes T, Craig JM, Nelson KE, Dupont CL.

MBio. 2018 Nov 27;9(6). pii: e01631-18. doi: 10.1128/mBio.01631-18.

18.

Co-occurrence of Anaerobes in Human Chronic Wounds.

Choi Y, Banerjee A, McNish S, Couch KS, Torralba MG, Lucas S, Tovchigrechko A, Madupu R, Yooseph S, Nelson KE, Shanmugam VK, Chan AP.

Microb Ecol. 2019 Apr;77(3):808-820. doi: 10.1007/s00248-018-1231-z. Epub 2018 Aug 23.

PMID:
30141127
19.

Papio spp. Colon microbiome and its link to obesity in pregnancy.

Li X, Rensing C, Taylor WL, Costelle C, Brejnrod AD, Ferry RJ Jr, Higgins PB, Folli F, Kottapalli KR, Hubbard GB, Dick EJ Jr, Yooseph S, Nelson KE, Schlabritz-Loutsevitch N.

J Med Primatol. 2018 Dec;47(6):393-401. doi: 10.1111/jmp.12366. Epub 2018 Jul 24.

PMID:
30039863
20.

Relationships Between Gastrointestinal Parasite Infections and the Fecal Microbiome in Free-Ranging Western Lowland Gorillas.

Vlčková K, Pafčo B, Petrželková KJ, Modrý D, Todd A, Yeoman CJ, Torralba M, Wilson BA, Stumpf RM, White BA, Nelson KE, Leigh SR, Gomez A.

Front Microbiol. 2018 Jun 15;9:1202. doi: 10.3389/fmicb.2018.01202. eCollection 2018.

21.

Spatial and Environmental Variation of the Human Hair Microbiota.

Brinkac L, Clarke TH, Singh H, Greco C, Gomez A, Torralba MG, Frank B, Nelson KE.

Sci Rep. 2018 Jun 13;8(1):9017. doi: 10.1038/s41598-018-27100-1.

22.

The finding of casual sex partners on the internet, methamphetamine use for sexual pleasure, and incidence of HIV infection among men who have sex with men in Bangkok, Thailand: an observational cohort study.

Piyaraj P, van Griensven F, Holtz TH, Mock PA, Varangrat A, Wimonsate W, Thienkrua W, Tongtoyai J, McNamara A, Chonwattana W, Nelson KE.

Lancet HIV. 2018 Jul;5(7):e379-e389. doi: 10.1016/S2352-3018(18)30065-1. Epub 2018 Jun 1. Erratum in: Lancet HIV. 2018 Jul;5(7):e340.

23.

Decision-making around gastrostomy tube feeding in children with neurologic impairment: Engaging effectively with families.

Mahant S, Cohen E, Nelson KE, Rosenbaum P.

Paediatr Child Health. 2018 May;23(3):209-213. doi: 10.1093/pch/pxx193. Epub 2018 May 11. English, French.

24.

Epidemiology of Genotype 1 and 2 Hepatitis E Virus Infections.

Nelson KE, Labrique AB, Kmush BL.

Cold Spring Harb Perspect Med. 2019 Jun 3;9(6). pii: a031732. doi: 10.1101/cshperspect.a031732. Review.

PMID:
29735579
25.

A Ten Year Immunopersistence Study of Hepatitis E Antibodies in Rural Bangladesh.

Kmush BL, Zaman K, Yunus M, Saha P, Nelson KE, Labrique AB.

Am J Epidemiol. 2018 Mar 23. doi: 10.1093/aje/kwy044. [Epub ahead of print]

PMID:
29584805
26.

Microbial metagenome of urinary tract infection.

Moustafa A, Li W, Singh H, Moncera KJ, Torralba MG, Yu Y, Manuel O, Biggs W, Venter JC, Nelson KE, Pieper R, Telenti A.

Sci Rep. 2018 Mar 12;8(1):4333. doi: 10.1038/s41598-018-22660-8.

27.

Emerging Methodologies in Pediatric Palliative Care Research: Six Case Studies.

Nelson KE, Feinstein JA, Gerhardt CA, Rosenberg AR, Widger K, Faerber JA, Feudtner C.

Children (Basel). 2018 Feb 26;5(3). pii: E32. doi: 10.3390/children5030032. Review.

28.

All Things Death and Dying: Health Professional Students Participating in the Death Café Model.

Nelson KE, Wright R, Abshire M, Davidson PM.

J Palliat Med. 2018 Jun;21(6):850-852. doi: 10.1089/jpm.2017.0440. Epub 2018 Feb 2.

PMID:
29393728
29.

Genetic risk, dysbiosis, and treatment stratification using host genome and gut microbiome in inflammatory bowel disease.

Moustafa A, Li W, Anderson EL, Wong EHM, Dulai PS, Sandborn WJ, Biggs W, Yooseph S, Jones MB, Venter JC, Nelson KE, Chang JT, Telenti A, Boland BS.

Clin Transl Gastroenterol. 2018 Jan 18;9(1):e132. doi: 10.1038/ctg.2017.58.

30.

Nasopharyngeal Lactobacillus is associated with a reduced risk of childhood wheezing illnesses following acute respiratory syncytial virus infection in infancy.

Rosas-Salazar C, Shilts MH, Tovchigrechko A, Schobel S, Chappell JD, Larkin EK, Gebretsadik T, Halpin RA, Nelson KE, Moore ML, Anderson LJ, Peebles RS Jr, Das SR, Hartert TV.

J Allergy Clin Immunol. 2018 Nov;142(5):1447-1456.e9. doi: 10.1016/j.jaci.2017.10.049. Epub 2018 Jan 10.

31.

Publisher Correction: Gastric acid suppression promotes alcoholic liver disease by inducing overgrowth of intestinal Enterococcus.

Llorente C, Jepsen P, Inamine T, Wang L, Bluemel S, Wang HJ, Loomba R, Bajaj JS, Schubert ML, Sikaroodi M, Gillevet PM, Xu J, Kisseleva T, Ho SB, DePew J, Du X, Sørensen HT, Vilstrup H, Nelson KE, Brenner DA, Fouts DE, Schnabl B.

Nat Commun. 2017 Dec 12;8(1):2137. doi: 10.1038/s41467-017-01779-8.

32.

Social behaviour and gut microbiota in red-bellied lemurs (Eulemur rubriventer): In search of the role of immunity in the evolution of sociality.

Raulo A, Ruokolainen L, Lane A, Amato K, Knight R, Leigh S, Stumpf R, White B, Nelson KE, Baden AL, Tecot SR.

J Anim Ecol. 2018 Mar;87(2):388-399. doi: 10.1111/1365-2656.12781. Epub 2017 Dec 5.

PMID:
29205327
33.

Impact of stress on the gut microbiome of free-ranging western lowland gorillas.

Vlčková K, Shutt-Phillips K, Heistermann M, Pafčo B, Petrželková KJ, Todd A, Modrý D, Nelson KE, Wilson BA, Stumpf RM, White BA, Leigh SR, Gomez A.

Microbiology. 2018 Jan;164(1):40-44. doi: 10.1099/mic.0.000587. Epub 2017 Dec 5.

PMID:
29205130
34.

Knowledge regarding hepatitis B mother-to-child transmission among healthcare workers in South China.

Chen Y, Xie C, Zhang Y, Li Y, Ehrhardt S, Thio CL, Nelson KE, Chen Y, Lin CS.

J Viral Hepat. 2018 May;25(5):561-570. doi: 10.1111/jvh.12839. Epub 2018 Jan 24.

PMID:
29194878
35.

A Microbiomic Analysis in African Americans with Colonic Lesions Reveals Streptococcus sp.VT162 as a Marker of Neoplastic Transformation.

Brim H, Yooseph S, Lee E, Sherif ZA, Abbas M, Laiyemo AO, Varma S, Torralba M, Dowd SE, Nelson KE, Pathmasiri W, Sumner S, de Vos W, Liang Q, Yu J, Zoetendal E, Ashktorab H.

Genes (Basel). 2017 Nov 9;8(11). pii: E314. doi: 10.3390/genes8110314.

36.

Bacterial Species Identified on the Skin of Bottlenose Dolphins Off Southern California via Next Generation Sequencing Techniques.

Russo CD, Weller DW, Nelson KE, Chivers SJ, Torralba M, Grimes DJ.

Microb Ecol. 2018 Feb;75(2):303-309. doi: 10.1007/s00248-017-1071-2. Epub 2017 Oct 28.

PMID:
29080910
37.

Gastric acid suppression promotes alcoholic liver disease by inducing overgrowth of intestinal Enterococcus.

Llorente C, Jepsen P, Inamine T, Wang L, Bluemel S, Wang HJ, Loomba R, Bajaj JS, Schubert ML, Sikaroodi M, Gillevet PM, Xu J, Kisseleva T, Ho SB, DePew J, Du X, Sørensen HT, Vilstrup H, Nelson KE, Brenner DA, Fouts DE, Schnabl B.

Nat Commun. 2017 Oct 16;8(1):837. doi: 10.1038/s41467-017-00796-x. Erratum in: Nat Commun. 2017 Dec 12;8(1):2137.

38.

Strain Level Streptococcus Colonization Patterns during the First Year of Life.

Wright MS, McCorrison J, Gomez AM, Beck E, Harkins D, Shankar J, Mounaud S, Segubre-Mercado E, Mojica AMR, Bacay B, Nzenze SA, Kimaro SZM, Adrian P, Klugman KP, Lucero MG, Nelson KE, Madhi S, Sutton GG, Nierman WC, Losada L.

Front Microbiol. 2017 Sep 6;8:1661. doi: 10.3389/fmicb.2017.01661. eCollection 2017.

39.

Comparative genomics of four Mycoplasma species of the human urogenital tract: Analysis of their core genomes and virulence genes.

Roachford OSE, Nelson KE, Mohapatra BR.

Int J Med Microbiol. 2017 Dec;307(8):508-520. doi: 10.1016/j.ijmm.2017.09.006. Epub 2017 Sep 5.

PMID:
28927691
40.

Host Genetic Control of the Oral Microbiome in Health and Disease.

Gomez A, Espinoza JL, Harkins DM, Leong P, Saffery R, Bockmann M, Torralba M, Kuelbs C, Kodukula R, Inman J, Hughes T, Craig JM, Highlander SK, Jones MB, Dupont CL, Nelson KE.

Cell Host Microbe. 2017 Sep 13;22(3):269-278.e3. doi: 10.1016/j.chom.2017.08.013.

41.

Type 1 Diabetes: Urinary Proteomics and Protein Network Analysis Support Perturbation of Lysosomal Function.

Singh H, Yu Y, Suh MJ, Torralba MG, Stenzel RD, Tovchigrechko A, Thovarai V, Harkins DM, Rajagopala SV, Osborne W, Cogen FR, Kaplowitz PB, Nelson KE, Madupu R, Pieper R.

Theranostics. 2017 Jul 7;7(10):2704-2717. doi: 10.7150/thno.19679. eCollection 2017.

42.

Integrating the microbiome as a resource in the forensics toolkit.

Clarke TH, Gomez A, Singh H, Nelson KE, Brinkac LM.

Forensic Sci Int Genet. 2017 Sep;30:141-147. doi: 10.1016/j.fsigen.2017.06.008. Epub 2017 Jun 27.

43.

Knowledge of and attitudes towards hepatitis B and its transmission from mother to child among pregnant women in Guangdong Province, China.

Han Z, Yin Y, Zhang Y, Ehrhardt S, Thio CL, Nelson KE, Bai X, Hou H.

PLoS One. 2017 Jun 2;12(6):e0178671. doi: 10.1371/journal.pone.0178671. eCollection 2017.

44.

The Importance of Military Conscripts for Surveillance of Human Immunodeficiency Virus Infection and Risk Behavior in Thailand.

Nelson KE, Rangsin R.

Curr HIV Res. 2017;15(3):161-169. doi: 10.2174/1570162X15666170517122011. Review.

PMID:
28521721
45.

The Threat of Antimicrobial Resistance on the Human Microbiome.

Brinkac L, Voorhies A, Gomez A, Nelson KE.

Microb Ecol. 2017 Nov;74(4):1001-1008. doi: 10.1007/s00248-017-0985-z. Epub 2017 May 11. Review.

46.

Development of an oral fluid immunoassay to assess past and recent hepatitis E virus (HEV) infection.

Pisanic N, Rahman A, Saha SK, Labrique AB, Nelson KE, Granger DA, Granger SW, Detrick B, Heaney CD.

J Immunol Methods. 2017 Sep;448:1-8. doi: 10.1016/j.jim.2017.04.012. Epub 2017 May 3.

47.

Epidural Neostigmine versus Fentanyl to Decrease Bupivacaine Use in Patient-controlled Epidural Analgesia during Labor: A Randomized, Double-blind, Controlled Study.

Booth JL, Ross VH, Nelson KE, Harris L, Eisenach JC, Pan PH.

Anesthesiology. 2017 Jul;127(1):50-57. doi: 10.1097/ALN.0000000000001669.

PMID:
28475555
48.

Regarding Perspective Piece from July 2016 "What Do We Know About Chagas Disease in the United States?"

Nelson KE, Ness PM, Leiby DA.

Am J Trop Med Hyg. 2017 Mar;96(3):762. doi: 10.4269/ajtmh.16-1014. No abstract available.

49.

Gut Microbiome-Based Metagenomic Signature for Non-invasive Detection of Advanced Fibrosis in Human Nonalcoholic Fatty Liver Disease.

Loomba R, Seguritan V, Li W, Long T, Klitgord N, Bhatt A, Dulai PS, Caussy C, Bettencourt R, Highlander SK, Jones MB, Sirlin CB, Schnabl B, Brinkac L, Schork N, Chen CH, Brenner DA, Biggs W, Yooseph S, Venter JC, Nelson KE.

Cell Metab. 2017 May 2;25(5):1054-1062.e5. doi: 10.1016/j.cmet.2017.04.001. Erratum in: Cell Metab. 2019 Sep 3;30(3):607.

50.

Utilization of defined microbial communities enables effective evaluation of meta-genomic assemblies.

Greenwald WW, Klitgord N, Seguritan V, Yooseph S, Venter JC, Garner C, Nelson KE, Li W.

BMC Genomics. 2017 Apr 13;18(1):296. doi: 10.1186/s12864-017-3679-5.

Supplemental Content

Loading ...
Support Center