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Items: 34

1.

Multiple Nonsense-Mediated mRNA Processes Require Smg5 in Drosophila.

Nelson JO, Förster D, Frizzell KA, Luschnig S, Metzstein MM.

Genetics. 2018 Aug;209(4):1073-1084. doi: 10.1534/genetics.118.301140. Epub 2018 Jun 14.

PMID:
29903866
2.

Transgenerational dynamics of rDNA copy number in Drosophila male germline stem cells.

Lu KL, Nelson JO, Watase GJ, Warsinger-Pepe N, Yamashita YM.

Elife. 2018 Feb 13;7. pii: e32421. doi: 10.7554/eLife.32421.

3.

Reactivation Assay to Identify Direct Targets of the Nonsense-Mediated mRNA Decay Pathway in Drosophila.

Nelson JO, Metzstein MM.

Methods Mol Biol. 2018;1720:205-211. doi: 10.1007/978-1-4939-7540-2_15.

PMID:
29236261
4.

Healthcare Antibiotic Resistance Prevalence - DC (HARP-DC): A Regional Prevalence Assessment of Carbapenem-Resistant Enterobacteriaceae (CRE) in Healthcare Facilities in Washington, District of Columbia.

Reuben J, Donegan N, Wortmann G, DeBiasi R, Song X, Kumar P, McFadden M, Clagon S, Mirdamadi J, White D, Harris JE, Browne A, Hooker J, Yochelson M, Walker M, Little G, Jernigan G, Hansen K, Dockery B, Sinatro B, Blaylock M, Harmon K, Iyengar P, Wagner T, Nelson JA; HARP Study Team.

Infect Control Hosp Epidemiol. 2017 Aug;38(8):921-929. doi: 10.1017/ice.2017.110. Epub 2017 Jun 15.

PMID:
28615088
5.

Degradation of Gadd45 mRNA by nonsense-mediated decay is essential for viability.

Nelson JO, Moore KA, Chapin A, Hollien J, Metzstein MM.

Elife. 2016 Mar 8;5. pii: e12876. doi: 10.7554/eLife.12876.

6.

What could go wrong that the NMC needs so much in reserves?

Nelson J.

Nurs Stand. 2014 Apr 16-22;28(33):33. doi: 10.7748/ns2014.04.28.33.33.s42. No abstract available.

PMID:
24734830
7.

How could we honour the memory of nurse Jacintha?

Nelson J.

Nurs Stand. 2013 Aug 7-13;27(49):32-3. No abstract available.

PMID:
23924126
8.

Comparative and demographic analysis of orang-utan genomes.

Locke DP, Hillier LW, Warren WC, Worley KC, Nazareth LV, Muzny DM, Yang SP, Wang Z, Chinwalla AT, Minx P, Mitreva M, Cook L, Delehaunty KD, Fronick C, Schmidt H, Fulton LA, Fulton RS, Nelson JO, Magrini V, Pohl C, Graves TA, Markovic C, Cree A, Dinh HH, Hume J, Kovar CL, Fowler GR, Lunter G, Meader S, Heger A, Ponting CP, Marques-Bonet T, Alkan C, Chen L, Cheng Z, Kidd JM, Eichler EE, White S, Searle S, Vilella AJ, Chen Y, Flicek P, Ma J, Raney B, Suh B, Burhans R, Herrero J, Haussler D, Faria R, Fernando O, Darré F, Farré D, Gazave E, Oliva M, Navarro A, Roberto R, Capozzi O, Archidiacono N, Della Valle G, Purgato S, Rocchi M, Konkel MK, Walker JA, Ullmer B, Batzer MA, Smit AF, Hubley R, Casola C, Schrider DR, Hahn MW, Quesada V, Puente XS, Ordoñez GR, López-Otín C, Vinar T, Brejova B, Ratan A, Harris RS, Miller W, Kosiol C, Lawson HA, Taliwal V, Martins AL, Siepel A, Roychoudhury A, Ma X, Degenhardt J, Bustamante CD, Gutenkunst RN, Mailund T, Dutheil JY, Hobolth A, Schierup MH, Ryder OA, Yoshinaga Y, de Jong PJ, Weinstock GM, Rogers J, Mardis ER, Gibbs RA, Wilson RK.

Nature. 2011 Jan 27;469(7331):529-33. doi: 10.1038/nature09687.

9.

A survey of indicators for reproductive endocrine disruption in Fundulus heteroclitus (killifish) at selected sites in the Chesapeake Bay.

Pait AS, Nelson JO.

Mar Environ Res. 2009 Oct;68(4):170-7. doi: 10.1016/j.marenvres.2009.06.006. Epub 2009 Jun 7.

PMID:
19589590
10.

Lineage-specific biology revealed by a finished genome assembly of the mouse.

Church DM, Goodstadt L, Hillier LW, Zody MC, Goldstein S, She X, Bult CJ, Agarwala R, Cherry JL, DiCuccio M, Hlavina W, Kapustin Y, Meric P, Maglott D, Birtle Z, Marques AC, Graves T, Zhou S, Teague B, Potamousis K, Churas C, Place M, Herschleb J, Runnheim R, Forrest D, Amos-Landgraf J, Schwartz DC, Cheng Z, Lindblad-Toh K, Eichler EE, Ponting CP; Mouse Genome Sequencing Consortium.

PLoS Biol. 2009 May 5;7(5):e1000112. doi: 10.1371/journal.pbio.1000112. Epub 2009 May 26.

11.

Evolutionary and biomedical insights from the rhesus macaque genome.

Rhesus Macaque Genome Sequencing and Analysis Consortium, Gibbs RA, Rogers J, Katze MG, Bumgarner R, Weinstock GM, Mardis ER, Remington KA, Strausberg RL, Venter JC, Wilson RK, Batzer MA, Bustamante CD, Eichler EE, Hahn MW, Hardison RC, Makova KD, Miller W, Milosavljevic A, Palermo RE, Siepel A, Sikela JM, Attaway T, Bell S, Bernard KE, Buhay CJ, Chandrabose MN, Dao M, Davis C, Delehaunty KD, Ding Y, Dinh HH, Dugan-Rocha S, Fulton LA, Gabisi RA, Garner TT, Godfrey J, Hawes AC, Hernandez J, Hines S, Holder M, Hume J, Jhangiani SN, Joshi V, Khan ZM, Kirkness EF, Cree A, Fowler RG, Lee S, Lewis LR, Li Z, Liu YS, Moore SM, Muzny D, Nazareth LV, Ngo DN, Okwuonu GO, Pai G, Parker D, Paul HA, Pfannkoch C, Pohl CS, Rogers YH, Ruiz SJ, Sabo A, Santibanez J, Schneider BW, Smith SM, Sodergren E, Svatek AF, Utterback TR, Vattathil S, Warren W, White CS, Chinwalla AT, Feng Y, Halpern AL, Hillier LW, Huang X, Minx P, Nelson JO, Pepin KH, Qin X, Sutton GG, Venter E, Walenz BP, Wallis JW, Worley KC, Yang SP, Jones SM, Marra MA, Rocchi M, Schein JE, Baertsch R, Clarke L, Csürös M, Glasscock J, Harris RA, Havlak P, Jackson AR, Jiang H, Liu Y, Messina DN, Shen Y, Song HX, Wylie T, Zhang L, Birney E, Han K, Konkel MK, Lee J, Smit AF, Ullmer B, Wang H, Xing J, Burhans R, Cheng Z, Karro JE, Ma J, Raney B, She X, Cox MJ, Demuth JP, Dumas LJ, Han SG, Hopkins J, Karimpour-Fard A, Kim YH, Pollack JR, Vinar T, Addo-Quaye C, Degenhardt J, Denby A, Hubisz MJ, Indap A, Kosiol C, Lahn BT, Lawson HA, Marklein A, Nielsen R, Vallender EJ, Clark AG, Ferguson B, Hernandez RD, Hirani K, Kehrer-Sawatzki H, Kolb J, Patil S, Pu LL, Ren Y, Smith DG, Wheeler DA, Schenck I, Ball EV, Chen R, Cooper DN, Giardine B, Hsu F, Kent WJ, Lesk A, Nelson DL, O'brien WE, Prüfer K, Stenson PD, Wallace JC, Ke H, Liu XM, Wang P, Xiang AP, Yang F, Barber GP, Haussler D, Karolchik D, Kern AD, Kuhn RM, Smith KE, Zwieg AS.

Science. 2007 Apr 13;316(5822):222-34.

12.

Generation and annotation of the DNA sequences of human chromosomes 2 and 4.

Hillier LW, Graves TA, Fulton RS, Fulton LA, Pepin KH, Minx P, Wagner-McPherson C, Layman D, Wylie K, Sekhon M, Becker MC, Fewell GA, Delehaunty KD, Miner TL, Nash WE, Kremitzki C, Oddy L, Du H, Sun H, Bradshaw-Cordum H, Ali J, Carter J, Cordes M, Harris A, Isak A, van Brunt A, Nguyen C, Du F, Courtney L, Kalicki J, Ozersky P, Abbott S, Armstrong J, Belter EA, Caruso L, Cedroni M, Cotton M, Davidson T, Desai A, Elliott G, Erb T, Fronick C, Gaige T, Haakenson W, Haglund K, Holmes A, Harkins R, Kim K, Kruchowski SS, Strong CM, Grewal N, Goyea E, Hou S, Levy A, Martinka S, Mead K, McLellan MD, Meyer R, Randall-Maher J, Tomlinson C, Dauphin-Kohlberg S, Kozlowicz-Reilly A, Shah N, Swearengen-Shahid S, Snider J, Strong JT, Thompson J, Yoakum M, Leonard S, Pearman C, Trani L, Radionenko M, Waligorski JE, Wang C, Rock SM, Tin-Wollam AM, Maupin R, Latreille P, Wendl MC, Yang SP, Pohl C, Wallis JW, Spieth J, Bieri TA, Berkowicz N, Nelson JO, Osborne J, Ding L, Meyer R, Sabo A, Shotland Y, Sinha P, Wohldmann PE, Cook LL, Hickenbotham MT, Eldred J, Williams D, Jones TA, She X, Ciccarelli FD, Izaurralde E, Taylor J, Schmutz J, Myers RM, Cox DR, Huang X, McPherson JD, Mardis ER, Clifton SW, Warren WC, Chinwalla AT, Eddy SR, Marra MA, Ovcharenko I, Furey TS, Miller W, Eichler EE, Bork P, Suyama M, Torrents D, Waterston RH, Wilson RK.

Nature. 2005 Apr 7;434(7034):724-31.

PMID:
15815621
13.
14.

The DNA sequence of human chromosome 7.

Hillier LW, Fulton RS, Fulton LA, Graves TA, Pepin KH, Wagner-McPherson C, Layman D, Maas J, Jaeger S, Walker R, Wylie K, Sekhon M, Becker MC, O'Laughlin MD, Schaller ME, Fewell GA, Delehaunty KD, Miner TL, Nash WE, Cordes M, Du H, Sun H, Edwards J, Bradshaw-Cordum H, Ali J, Andrews S, Isak A, Vanbrunt A, Nguyen C, Du F, Lamar B, Courtney L, Kalicki J, Ozersky P, Bielicki L, Scott K, Holmes A, Harkins R, Harris A, Strong CM, Hou S, Tomlinson C, Dauphin-Kohlberg S, Kozlowicz-Reilly A, Leonard S, Rohlfing T, Rock SM, Tin-Wollam AM, Abbott A, Minx P, Maupin R, Strowmatt C, Latreille P, Miller N, Johnson D, Murray J, Woessner JP, Wendl MC, Yang SP, Schultz BR, Wallis JW, Spieth J, Bieri TA, Nelson JO, Berkowicz N, Wohldmann PE, Cook LL, Hickenbotham MT, Eldred J, Williams D, Bedell JA, Mardis ER, Clifton SW, Chissoe SL, Marra MA, Raymond C, Haugen E, Gillett W, Zhou Y, James R, Phelps K, Iadanoto S, Bubb K, Simms E, Levy R, Clendenning J, Kaul R, Kent WJ, Furey TS, Baertsch RA, Brent MR, Keibler E, Flicek P, Bork P, Suyama M, Bailey JA, Portnoy ME, Torrents D, Chinwalla AT, Gish WR, Eddy SR, McPherson JD, Olson MV, Eichler EE, Green ED, Waterston RH, Wilson RK.

Nature. 2003 Jul 10;424(6945):157-64.

PMID:
12853948
15.
16.

The persistence and degradation of chlorothalonil and chlorpyrifos in a cranberry bog.

Putnam RA, Nelson JO, Clark JM.

J Agric Food Chem. 2003 Jan 1;51(1):170-6.

PMID:
12502403
17.

Initial sequencing and comparative analysis of the mouse genome.

Mouse Genome Sequencing Consortium, Waterston RH, Lindblad-Toh K, Birney E, Rogers J, Abril JF, Agarwal P, Agarwala R, Ainscough R, Alexandersson M, An P, Antonarakis SE, Attwood J, Baertsch R, Bailey J, Barlow K, Beck S, Berry E, Birren B, Bloom T, Bork P, Botcherby M, Bray N, Brent MR, Brown DG, Brown SD, Bult C, Burton J, Butler J, Campbell RD, Carninci P, Cawley S, Chiaromonte F, Chinwalla AT, Church DM, Clamp M, Clee C, Collins FS, Cook LL, Copley RR, Coulson A, Couronne O, Cuff J, Curwen V, Cutts T, Daly M, David R, Davies J, Delehaunty KD, Deri J, Dermitzakis ET, Dewey C, Dickens NJ, Diekhans M, Dodge S, Dubchak I, Dunn DM, Eddy SR, Elnitski L, Emes RD, Eswara P, Eyras E, Felsenfeld A, Fewell GA, Flicek P, Foley K, Frankel WN, Fulton LA, Fulton RS, Furey TS, Gage D, Gibbs RA, Glusman G, Gnerre S, Goldman N, Goodstadt L, Grafham D, Graves TA, Green ED, Gregory S, Guigó R, Guyer M, Hardison RC, Haussler D, Hayashizaki Y, Hillier LW, Hinrichs A, Hlavina W, Holzer T, Hsu F, Hua A, Hubbard T, Hunt A, Jackson I, Jaffe DB, Johnson LS, Jones M, Jones TA, Joy A, Kamal M, Karlsson EK, Karolchik D, Kasprzyk A, Kawai J, Keibler E, Kells C, Kent WJ, Kirby A, Kolbe DL, Korf I, Kucherlapati RS, Kulbokas EJ, Kulp D, Landers T, Leger JP, Leonard S, Letunic I, Levine R, Li J, Li M, Lloyd C, Lucas S, Ma B, Maglott DR, Mardis ER, Matthews L, Mauceli E, Mayer JH, McCarthy M, McCombie WR, McLaren S, McLay K, McPherson JD, Meldrim J, Meredith B, Mesirov JP, Miller W, Miner TL, Mongin E, Montgomery KT, Morgan M, Mott R, Mullikin JC, Muzny DM, Nash WE, Nelson JO, Nhan MN, Nicol R, Ning Z, Nusbaum C, O'Connor MJ, Okazaki Y, Oliver K, Overton-Larty E, Pachter L, Parra G, Pepin KH, Peterson J, Pevzner P, Plumb R, Pohl CS, Poliakov A, Ponce TC, Ponting CP, Potter S, Quail M, Reymond A, Roe BA, Roskin KM, Rubin EM, Rust AG, Santos R, Sapojnikov V, Schultz B, Schultz J, Schwartz MS, Schwartz S, Scott C, Seaman S, Searle S, Sharpe T, Sheridan A, Shownkeen R, Sims S, Singer JB, Slater G, Smit A, Smith DR, Spencer B, Stabenau A, Stange-Thomann N, Sugnet C, Suyama M, Tesler G, Thompson J, Torrents D, Trevaskis E, Tromp J, Ucla C, Ureta-Vidal A, Vinson JP, Von Niederhausern AC, Wade CM, Wall M, Weber RJ, Weiss RB, Wendl MC, West AP, Wetterstrand K, Wheeler R, Whelan S, Wierzbowski J, Willey D, Williams S, Wilson RK, Winter E, Worley KC, Wyman D, Yang S, Yang SP, Zdobnov EM, Zody MC, Lander ES.

Nature. 2002 Dec 5;420(6915):520-62.

PMID:
12466850
18.
19.
20.

Evaluation of atrazine soil extraction methods for the determination by enzyme immunoassay and gas chromatography.

Del Valle PL, Nelson JO.

Arch Environ Contam Toxicol. 1994 Oct;27(3):375-83.

PMID:
7944554
21.

CD45: a transmembrane protein tyrosine phosphatase involved in the transduction of antigenic signals.

Weaver CT, Pingel JT, Nelson JO, Thomas ML.

Biochem Soc Trans. 1992 Feb;20(1):169-74. Review. No abstract available.

PMID:
1386036
22.
23.
24.

Physical comparison of parathion hydrolase plasmids from Pseudomonas diminuta and Flavobacterium sp.

Mulbry WW, Kearney PC, Nelson JO, Karns JS.

Plasmid. 1987 Sep;18(2):173-7.

PMID:
2829255
25.

Bacterial detoxification of diisopropyl fluorophosphate.

Attaway H, Nelson JO, Baya AM, Voll MJ, White WE, Grimes DJ, Colwell RR.

Appl Environ Microbiol. 1987 Jul;53(7):1685-9.

26.

Identification of a plasmid-borne parathion hydrolase gene from Flavobacterium sp. by southern hybridization with opd from Pseudomonas diminuta.

Mulbry WW, Karns JS, Kearney PC, Nelson JO, McDaniel CS, Wild JR.

Appl Environ Microbiol. 1986 May;51(5):926-30.

27.

NBD-chloride is a potent mutagen in the Salmonella mutagenicity assay.

Nelson JO, Warren PF.

Mutat Res. 1981 Apr;88(4):351-4. No abstract available.

PMID:
6789197
28.

2,3,7,8-tetrachlorodibenzo-p-dioxin: in vitro binding to rat liver microsomes.

Nelson JO, Menzer RE, Kearney PC, Pimmer JR.

Bull Environ Contam Toxicol. 1977 Jul;18(1):9-13. No abstract available.

PMID:
884342
29.

Metabolism of maleic hydrazide (MH) by hepatic microsomes from phenobarbital induced rats.

Nelson JO, Kearney PC.

Bull Environ Contam Toxicol. 1977 Jan;17(1):108-11. No abstract available.

PMID:
836972
30.

Metabolism of 2,5,2' -trichloro-, 2,5,2',5' -tetrachloro-, and 2,4,5,2',5' -pentachlorobiphenyl in rat hepatic microsomal systems.

Ghiasuddin SM, Menzer RE, Nelson JO.

Toxicol Appl Pharmacol. 1976 Apr;36(1):187-94. No abstract available.

PMID:
818740
31.

Separation and comparative toxicity of toxaphene components.

Nelson JO, Matsumura F.

J Agric Food Chem. 1975 Sep-Oct;23(5):984-90. No abstract available.

PMID:
808565
32.

A simplified approach to studies of toxic toxaphene components.

Nelson JO, Matsumura F.

Bull Environ Contam Toxicol. 1975 Apr;13(4):464-70. No abstract available.

PMID:
805615
33.

Dieldrin (HEOD) metabolism in cockroaches and house flies.

Nelson JO, Matsumura F.

Arch Environ Contam Toxicol. 1973 Oct;1(3):224-44. No abstract available.

PMID:
4776415
34.

Indentification of the major metabolic product of heptachlor epoxide in rat feces.

Matsumura F, Nelson JO.

Bull Environ Contam Toxicol. 1970 Nov;5(6):489-92. doi: 10.1007/BF01539976. No abstract available.

PMID:
23989411

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