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Items: 14

1.

Diatoms diversify and turn over faster in freshwater than marine environments.

Nakov T, Beaulieu JM, Alverson AJ.

Evolution. 2019 Dec;73(12):2497-2511. doi: 10.1111/evo.13832. Epub 2019 Sep 5.

PMID:
31429470
2.

A single loss of photosynthesis in the diatom order Bacillariales (Bacillariophyta).

Onyshchenko A, Ruck EC, Nakov T, Alverson AJ.

Am J Bot. 2019 Apr;106(4):560-572. doi: 10.1002/ajb2.1267. Epub 2019 Apr 8.

PMID:
30958893
3.

Insights into global planktonic diatom diversity: The importance of comparisons between phylogenetically equivalent units that account for time.

Nakov T, Beaulieu JM, Alverson AJ.

ISME J. 2018 Nov;12(11):2807-2810. doi: 10.1038/s41396-018-0221-y. Epub 2018 Jul 16.

4.

Recurrent Loss, Horizontal Transfer, and the Obscure Origins of Mitochondrial Introns in Diatoms (Bacillariophyta).

Guillory WX, Onyshchenko A, Ruck EC, Parks M, Nakov T, Wickett NJ, Alverson AJ.

Genome Biol Evol. 2018 Jun 1;10(6):1504-1515. doi: 10.1093/gbe/evy103.

5.

Phylogenomics reveals an extensive history of genome duplication in diatoms (Bacillariophyta).

Parks MB, Nakov T, Ruck EC, Wickett NJ, Alverson AJ.

Am J Bot. 2018 Mar;105(3):330-347. doi: 10.1002/ajb2.1056. Epub 2018 Apr 17.

6.

Accelerated diversification is related to life history and locomotion in a hyperdiverse lineage of microbial eukaryotes (Diatoms, Bacillariophyta).

Nakov T, Beaulieu JM, Alverson AJ.

New Phytol. 2018 Jul;219(1):462-473. doi: 10.1111/nph.15137. Epub 2018 Apr 6.

7.

Morphological diversity and phylogeny of the diatom genus Entomoneis (Bacillariophyta) in marine plankton: six new species from the Adriatic Sea.

Mejdandžić M, Bosak S, Nakov T, Ruck E, Orlić S, Gligora Udovič M, Peharec Štefanić P, Špoljarić I, Mršić G, Ljubešić Z.

J Phycol. 2018 Apr;54(2):275-298. doi: 10.1111/jpy.12622. Epub 2018 Mar 7.

PMID:
29419886
8.

Models with unequal transition rates favor marine origins of Cyanobacteria and photosynthetic eukaryotes.

Nakov T, Boyko JD, Alverson AJ, Beaulieu JM.

Proc Natl Acad Sci U S A. 2017 Dec 12;114(50):E10606-E10607. doi: 10.1073/pnas.1716692114. Epub 2017 Dec 5. No abstract available.

9.

Hoarding and horizontal transfer led to an expanded gene and intron repertoire in the plastid genome of the diatom, Toxarium undulatum (Bacillariophyta).

Ruck EC, Linard SR, Nakov T, Theriot EC, Alverson AJ.

Curr Genet. 2017 Jun;63(3):499-507. doi: 10.1007/s00294-016-0652-9. Epub 2016 Sep 21.

PMID:
27655214
10.

Phylogeny, ecology, morphological evolution, and reclassification of the diatom orders Surirellales and Rhopalodiales.

Ruck EC, Nakov T, Alverson AJ, Theriot EC.

Mol Phylogenet Evol. 2016 Oct;103:155-171. doi: 10.1016/j.ympev.2016.07.023. Epub 2016 Jul 22.

PMID:
27456747
11.

Dissecting signal and noise in diatom chloroplast protein encoding genes with phylogenetic information profiling.

Theriot EC, Ashworth MP, Nakov T, Ruck E, Jansen RK.

Mol Phylogenet Evol. 2015 Aug;89:28-36. doi: 10.1016/j.ympev.2015.03.012. Epub 2015 Apr 4.

PMID:
25848969
12.

Comparative analysis of the interaction between habitat and growth form in diatoms.

Nakov T, Ashworth M, Theriot EC.

ISME J. 2015 Jan;9(1):246-55. doi: 10.1038/ismej.2014.108. Epub 2014 Jul 1.

13.

Serial gene losses and foreign DNA underlie size and sequence variation in the plastid genomes of diatoms.

Ruck EC, Nakov T, Jansen RK, Theriot EC, Alverson AJ.

Genome Biol Evol. 2014 Mar;6(3):644-54. doi: 10.1093/gbe/evu039.

14.

Revisiting Ross and Sims (1971): toward a molecular phylogeny of the Biddulphiaceae and Eupodiscaceae (Bacillariophyceae).

Ashworth MP, Nakov T, Theriot EC.

J Phycol. 2013 Dec;49(6):1207-22. doi: 10.1111/jpy.12131. Epub 2013 Nov 11.

PMID:
27007638

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