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Items: 1 to 50 of 73

1.

Factors affecting interpretation of national biomonitoring data from multiple countries: BPA as a case study.

LaKind JS, Pollock T, Naiman DQ, Kim S, Nagasawa A, Clarke J.

Environ Res. 2019 Jun;173:318-329. doi: 10.1016/j.envres.2019.03.047. Epub 2019 Mar 26.

2.

ExpoQual: Evaluating measured and modeled human exposure data.

LaKind JS, O'Mahony C, Armstrong T, Tibaldi R, Blount BC, Naiman DQ.

Environ Res. 2019 Apr;171:302-312. doi: 10.1016/j.envres.2019.01.039. Epub 2019 Jan 25.

3.

Biomonitoring and Nonpersistent Chemicals-Understanding and Addressing Variability and Exposure Misclassification.

LaKind JS, Idri F, Naiman DQ, Verner MA.

Curr Environ Health Rep. 2019 Mar;6(1):16-21. doi: 10.1007/s40572-019-0227-2. Review.

PMID:
30701410
4.

Effectiveness of viable cryopreserved placental membranes for management of diabetic foot ulcers in a real world setting.

Raspovic KM, Wukich DK, Naiman DQ, Lavery LA, Kirsner RS, Kim PJ, Steinberg JS, Attinger CE, Danilkovitch A.

Wound Repair Regen. 2018 Mar;26(2):213-220. doi: 10.1111/wrr.12635. Epub 2018 May 23.

PMID:
29683538
5.

Nonprimary PCI at hospitals without cardiac surgery on-site: Consistent outcomes for all?

Czarny MJ, Miller JM, Naiman DQ, Hwang CW, Hasan RK, Lemmon CC, Aversano T.

Am Heart J. 2018 Mar;197:18-26. doi: 10.1016/j.ahj.2017.10.023. Epub 2017 Nov 6.

PMID:
29447780
6.

Increasing Physical Activity Amongst Overweight and Obese Cancer Survivors Using an Alexa-Based Intelligent Agent for Patient Coaching: Protocol for the Physical Activity by Technology Help (PATH) Trial.

Hassoon A, Schrack J, Naiman D, Lansey D, Baig Y, Stearns V, Celentano D, Martin S, Appel L.

JMIR Res Protoc. 2018 Feb 12;7(2):e27. doi: 10.2196/resprot.9096.

7.

Critical and systematic evaluation of data for estimating human exposures to 2,4-dichlorophenoxyacetic acid (2,4-D) - quality and generalizability.

LaKind JS, Burns CJ, Naiman DQ, O'Mahony C, Vilone G, Burns AJ, Naiman JS.

J Toxicol Environ Health B Crit Rev. 2017;20(8):423-446. doi: 10.1080/10937404.2017.1396704. Epub 2017 Nov 20. Review.

PMID:
29157177
8.

Systematic review of the literature on triclosan and health outcomes in humans.

Goodman M, Naiman DQ, LaKind JS.

Crit Rev Toxicol. 2018 Jan;48(1):1-51. doi: 10.1080/10408444.2017.1350138. Epub 2017 Jul 25.

PMID:
28741979
9.

Heparin versus bivalirudin for non-primary percutaneous coronary intervention: A post-Hoc analysis of the CPORT-E trial.

Czarny MJ, Hwang CW, Naiman DQ, Lemmon CC, Hasan RK, Wang T, Aversano T.

Catheter Cardiovasc Interv. 2017 Sep 1;90(3):366-377. doi: 10.1002/ccd.26953. Epub 2017 Feb 4.

PMID:
28160375
10.

A screen for constituents of motor control and decision making in Drosophila reveals visual distance-estimation neurons.

Triphan T, Nern A, Roberts SF, Korff W, Naiman DQ, Strauss R.

Sci Rep. 2016 Jun 3;6:27000. doi: 10.1038/srep27000.

11.

School factors associated with the provision of physical education and levels of physical activity among elementary school students in Ontario.

Naiman DI, Leatherdale ST, Gotay C, Mâsse LC.

Can J Public Health. 2015 Apr 30;106(5):e290-6. doi: 10.17269/cjph.106.4899.

PMID:
26451990
12.

SubClonal Hierarchy Inference from Somatic Mutations: Automatic Reconstruction of Cancer Evolutionary Trees from Multi-region Next Generation Sequencing.

Niknafs N, Beleva-Guthrie V, Naiman DQ, Karchin R.

PLoS Comput Biol. 2015 Oct 5;11(10):e1004416. doi: 10.1371/journal.pcbi.1004416. eCollection 2015 Oct.

13.

Longitudinal Examination of Adaptive Behavior in Autism Spectrum Disorders: Influence of Executive Function.

Pugliese CE, Anthony LG, Strang JF, Dudley K, Wallace GL, Naiman DQ, Kenworthy L.

J Autism Dev Disord. 2016 Feb;46(2):467-77. doi: 10.1007/s10803-015-2584-5.

14.
15.

Multiclass cancer classification based on gene expression comparison.

Yang S, Naiman DQ.

Stat Appl Genet Mol Biol. 2014 Aug;13(4):477-96. doi: 10.1515/sagmb-2013-0053.

16.

Why do we differ in number sense? Evidence from a genetically sensitive investigation.

Tosto MG, Petrill SA, Halberda J, Trzaskowski M, Tikhomirova TN, Bogdanova OY, Ly R, Wilmer JB, Naiman DQ, Germine L, Plomin R, Kovas Y.

Intelligence. 2014 Mar;43(100):35-46.

17.

Integrative correlation: Properties and relation to canonical correlations.

Cope L, Naiman DQ, Parmigiani G.

J Multivar Anal. 2014 Jan 1;123:270-280.

18.

Randomized controlled effectiveness trial of executive function intervention for children on the autism spectrum.

Kenworthy L, Anthony LG, Naiman DQ, Cannon L, Wills MC, Luong-Tran C, Werner MA, Alexander KC, Strang J, Bal E, Sokoloff JL, Wallace GL.

J Child Psychol Psychiatry. 2014 Apr;55(4):374-83. doi: 10.1111/jcpp.12161. Epub 2013 Nov 21.

19.

From policy to practice: implementation of physical activity and food policies in schools.

Mâsse LC, Naiman D, Naylor PJ.

Int J Behav Nutr Phys Act. 2013 Jun 3;10:71. doi: 10.1186/1479-5868-10-71.

20.

Improving infant exposure and health risk estimates: using serum data to predict polybrominated diphenyl ether concentrations in breast milk.

Marchitti SA, LaKind JS, Naiman DQ, Berlin CM, Kenneke JF.

Environ Sci Technol. 2013 May 7;47(9):4787-95. doi: 10.1021/es305229d. Epub 2013 Apr 25.

PMID:
23582134
21.

Use of NHANES data to link chemical exposures to chronic diseases: a cautionary tale.

LaKind JS, Goodman M, Naiman DQ.

PLoS One. 2012;7(12):e51086. doi: 10.1371/journal.pone.0051086. Epub 2012 Dec 5. Erratum in: PLoS One. 2013;8(5). doi:10.1371/annotation/58af47b6-7a13-442d-b22b-86783ff12a4d.

22.

Number sense across the lifespan as revealed by a massive Internet-based sample.

Halberda J, Ly R, Wilmer JB, Naiman DQ, Germine L.

Proc Natl Acad Sci U S A. 2012 Jul 10;109(28):11116-20. doi: 10.1073/pnas.1200196109. Epub 2012 Jun 25.

23.

Next-generation polymer solar cell materials: designed control of interfacial variables.

Lecover R, Williams N, Markovic N, Reich DH, Naiman DQ, Katz HE.

ACS Nano. 2012 Apr 24;6(4):2865-70. doi: 10.1021/nn301140w. Epub 2012 Mar 23.

PMID:
22444948
24.

Comparing United States and Canadian population exposures from National Biomonitoring Surveys: bisphenol A intake as a case study.

Lakind JS, Levesque J, Dumas P, Bryan S, Clarke J, Naiman DQ.

J Expo Sci Environ Epidemiol. 2012 May-Jun;22(3):219-26. doi: 10.1038/jes.2012.1. Epub 2012 Feb 15.

25.

Psychosocial aspects of childhood obesity.

De Niet JE, Naiman DI.

Minerva Pediatr. 2011 Dec;63(6):491-505. Review.

PMID:
22075804
26.

New regulators of a high affinity Ca2+ influx system revealed through a genome-wide screen in yeast.

Martin DC, Kim H, Mackin NA, Maldonado-Báez L, Evangelista CC Jr, Beaudry VG, Dudgeon DD, Naiman DQ, Erdman SE, Cunningham KW.

J Biol Chem. 2011 Mar 25;286(12):10744-54. doi: 10.1074/jbc.M110.177451. Epub 2011 Jan 20.

27.

Daily intake of bisphenol A and potential sources of exposure: 2005-2006 National Health and Nutrition Examination Survey.

Lakind JS, Naiman DQ.

J Expo Sci Environ Epidemiol. 2011 May-Jun;21(3):272-9. doi: 10.1038/jes.2010.9. Epub 2010 Mar 17.

28.

Do human milk concentrations of persistent organic chemicals really decline during lactation? Chemical concentrations during lactation and milk/serum partitioning.

LaKind JS, Berlin CM Jr, Sjödin A, Turner W, Wang RY, Needham LL, Paul IM, Stokes JL, Naiman DQ, Patterson DG Jr.

Environ Health Perspect. 2009 Oct;117(10):1625-31. doi: 10.1289/ehp.0900876. Epub 2009 Jun 15.

29.

Micro-computed tomography measurements of peripheral lung pathology in chronic obstructive pulmonary disease.

Hogg JC, McDonough JE, Sanchez PG, Cooper JD, Coxson HO, Elliott WM, Naiman D, Pochettino M, Horng D, Gefter WB, Wright AC.

Proc Am Thorac Soc. 2009 Sep 15;6(6):546-9. doi: 10.1513/pats.200905-029DS.

30.

Correlation of multiple peptide mass spectra for phosphoprotein identification.

Feng J, Garrett WM, Naiman DQ, Cooper B.

J Proteome Res. 2009 Nov;8(11):5396-405. doi: 10.1021/pr900596u.

PMID:
19719328
31.

The ordering of expression among a few genes can provide simple cancer biomarkers and signal BRCA1 mutations.

Lin X, Afsari B, Marchionni L, Cope L, Parmigiani G, Naiman D, Geman D.

BMC Bioinformatics. 2009 Aug 20;10:256. doi: 10.1186/1471-2105-10-256.

32.

Public health interpretation of trihalomethane blood levels in the United States: NHANES 1999-2004.

LaKind JS, Naiman DQ, Hays SM, Aylward LL, Blount BC.

J Expo Sci Environ Epidemiol. 2010 May;20(3):255-62. doi: 10.1038/jes.2009.35. Epub 2009 Jun 24.

PMID:
19550438
33.

Coding DNA repeated throughout intergenic regions of the Arabidopsis thaliana genome: evolutionary footprints of RNA silencing.

Feng J, Naiman DQ, Cooper B.

Mol Biosyst. 2009 Dec;5(12):1679-87. doi: 10.1039/b903031j. Epub 2009 Apr 30.

PMID:
19452047
34.

Molecular genetics of addiction and related heritable phenotypes: genome-wide association approaches identify "connectivity constellation" and drug target genes with pleiotropic effects.

Uhl GR, Drgon T, Johnson C, Li CY, Contoreggi C, Hess J, Naiman D, Liu QR.

Ann N Y Acad Sci. 2008 Oct;1141:318-81. doi: 10.1196/annals.1441.018. Review.

35.

Perspective on serum dioxin levels in the United States: an evaluation of the NHANES data.

LaKind JS, Hays SM, Aylward LL, Naiman DQ.

J Expo Sci Environ Epidemiol. 2009 May;19(4):435-41. doi: 10.1038/jes.2008.63. Epub 2008 Oct 15.

PMID:
18854873
36.

Quantitative proteomic analysis of bean plants infected by a virulent and avirulent obligate rust fungus.

Lee J, Feng J, Campbell KB, Scheffler BE, Garrett WM, Thibivilliers S, Stacey G, Naiman DQ, Tucker ML, Pastor-Corrales MA, Cooper B.

Mol Cell Proteomics. 2009 Jan;8(1):19-31. doi: 10.1074/mcp.M800156-MCP200. Epub 2008 Aug 28.

37.

Combined dynamic arrays for storing and searching semi-ordered tandem mass spectrometry data.

Feng J, Naiman DQ, Cooper B.

J Comput Biol. 2008 May;15(4):457-68. doi: 10.1089/cmb.2008.0011.

PMID:
18435569
38.

Predicting sigma28 promoters in eleven Shewanella genomes.

Song W, Juhn FS, Naiman DQ, Konstantinidis KT, Gardner TS, Ward MJ.

FEMS Microbiol Lett. 2008 Jun;283(2):223-30. doi: 10.1111/j.1574-6968.2008.01175.x. Epub 2008 Apr 19.

39.

Bisphenol A (BPA) daily intakes in the United States: estimates from the 2003-2004 NHANES urinary BPA data.

Lakind JS, Naiman DQ.

J Expo Sci Environ Epidemiol. 2008 Nov;18(6):608-15. doi: 10.1038/jes.2008.20. Epub 2008 Apr 16.

PMID:
18414515
40.
41.

Probability model for assessing proteins assembled from peptide sequences inferred from tandem mass spectrometry data.

Feng J, Naiman DQ, Cooper B.

Anal Chem. 2007 May 15;79(10):3901-11. Epub 2007 Apr 19.

PMID:
17441689
42.

Sigma 28 promoter prediction in members of the Gammaproteobacteria.

Song W, Maiste PJ, Naiman DQ, Ward MJ.

FEMS Microbiol Lett. 2007 Jun;271(2):222-9. Epub 2007 Apr 17.

43.

Assigning concentration values for dioxin and furan congeners in human serum when measurements are below limits of detection: an observational approach.

Needham LL, Naiman DQ, Patterson DG Jr, LaKind JS.

Chemosphere. 2007 Mar;67(3):439-47. Epub 2006 Nov 15.

PMID:
17109932
44.

Random data set generation to support microarray analysis.

Naiman DQ.

Methods Enzymol. 2006;411:312-25. Review.

PMID:
16939797
45.

Classifying gene expression profiles from pairwise mRNA comparisons.

Geman D, d'Avignon C, Naiman DQ, Winslow RL.

Stat Appl Genet Mol Biol. 2004;3:Article19. Epub 2004 Aug 30.

46.

Estimates of exposures to perchlorate from consumption of human milk, dairy milk, and water, and comparison to current reference dose.

Baier-Anderson C, Blount BC, Lakind JS, Naiman DQ, Wilbur SB, Tan S.

J Toxicol Environ Health A. 2006 Feb;69(3-4):319-30.

PMID:
16407090
47.

Cortical reconstruction using implicit surface evolution: accuracy and precision analysis.

Tosun D, Rettmann ME, Naiman DQ, Resnick SM, Kraut MA, Prince JL.

Neuroimage. 2006 Feb 1;29(3):838-52. Epub 2005 Nov 2.

48.

Robust prostate cancer marker genes emerge from direct integration of inter-study microarray data.

Xu L, Tan AC, Naiman DQ, Geman D, Winslow RL.

Bioinformatics. 2005 Oct 15;21(20):3905-11. Epub 2005 Aug 30.

PMID:
16131522
49.

Simple decision rules for classifying human cancers from gene expression profiles.

Tan AC, Naiman DQ, Xu L, Winslow RL, Geman D.

Bioinformatics. 2005 Oct 15;21(20):3896-904. Epub 2005 Aug 16.

50.

p-Value simulation for affected sib pair multiple testing.

Wu X, Naiman DQ.

Hum Hered. 2005;59(4):190-200. Epub 2005 Jul 7.

PMID:
16015029

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