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Items: 43

1.

A WUSCHEL Homeobox Transcription Factor, OsWOX13, Enhances Drought Tolerance and Triggers Early Flowering in Rice.

Minh-Thu PT, Kim JS, Chae S, Jun KM, Lee GS, Kim DE, Cheong JJ, Song SI, Nahm BH, Kim YK.

Mol Cells. 2018 Aug 31;41(8):781-798. doi: 10.14348/molcells.2018.0203. Epub 2018 Jul 30.

2.

Analysis of Genes with Alternatively Spliced Transcripts in the Leaf, Root, Panicle and Seed of Rice Using a Long Oligomer Microarray and RNA-Seq.

Chae S, Kim JS, Jun KM, Lee SB, Kim MS, Nahm BH, Kim YK.

Mol Cells. 2017 Oct;40(10):714-730. doi: 10.14348/molcells.2017.2297. Epub 2017 Oct 19.

3.

RapaNet: A Web Tool for the Co-Expression Analysis of Brassica rapa Genes.

Kim J, Jun KM, Kim JS, Chae S, Pahk YM, Lee TH, Sohn SI, Lee SI, Lim MH, Kim CK, Hur Y, Nahm BH, Kim YK.

Evol Bioinform Online. 2017 Jun 19;13:1176934317715421. doi: 10.1177/1176934317715421. eCollection 2017.

4.

Genome-wide identification of grain filling genes regulated by the OsSMF1 transcription factor in rice.

Kim JS, Chae S, Jun KM, Pahk YM, Lee TH, Chung PJ, Kim YK, Nahm BH.

Rice (N Y). 2017 Dec;10(1):16. doi: 10.1186/s12284-017-0155-4. Epub 2017 Apr 26.

5.

A single module type I polyketide synthase directs de novo macrolactone biogenesis during galbonolide biosynthesis in Streptomyces galbus.

Kim HJ, Karki S, Kwon SY, Park SH, Nahm BH, Kim YK, Kwon HJ.

J Biol Chem. 2014 Dec 12;289(50):34557-68. doi: 10.1074/jbc.M114.602334. Epub 2014 Oct 21.

6.

A pepper MSRB2 gene confers drought tolerance in rice through the protection of chloroplast-targeted genes.

Kim JS, Park HM, Chae S, Lee TH, Hwang DJ, Oh SD, Park JS, Song DG, Pan CH, Choi D, Kim YH, Nahm BH, Kim YK.

PLoS One. 2014 Mar 10;9(3):e90588. doi: 10.1371/journal.pone.0090588. eCollection 2014.

7.

Transcriptome analysis of leaf and root of rice seedling to acute dehydration.

Minh-Thu PT, Hwang DJ, Jeon JS, Nahm BH, Kim YK.

Rice (N Y). 2013 Dec 16;6(1):38. doi: 10.1186/1939-8433-6-38.

8.

Abiotic stress responsive rice ASR1 and ASR3 exhibit different tissue-dependent sugar and hormone-sensitivities.

Joo J, Lee YH, Kim YK, Nahm BH, Song SI.

Mol Cells. 2013 May;35(5):421-35. doi: 10.1007/s10059-013-0036-7. Epub 2013 Apr 24.

9.

Quadruple 9-mer-based protein binding microarray analysis confirms AACnG as the consensus nucleotide sequence sufficient for the specific binding of AtMYB44.

Jung C, Kim YK, Oh NI, Shim JS, Seo JS, Choi YD, Nahm BH, Cheong JJ.

Mol Cells. 2012 Dec;34(6):531-7. doi: 10.1007/s10059-012-0209-9. Epub 2012 Nov 15.

10.

An integrated PCR microfluidic chip incorporating aseptic electrochemical cell lysis and capillary electrophoresis amperometric DNA detection for rapid and quantitative genetic analysis.

Jha SK, Chand R, Han D, Jang YC, Ra GS, Kim JS, Nahm BH, Kim YS.

Lab Chip. 2012 Nov 7;12(21):4455-64. doi: 10.1039/c2lc40727b.

PMID:
22960653
11.

FSTVAL: a new web tool to validate bulk flanking sequence tags.

Kim JS, Kim J, Lee TH, Jun KM, Kim TH, Kim YH, Park HM, Jeon JS, An G, Yoon UH, Nahm BH, Kim YK.

Plant Methods. 2012 Jun 18;8(1):19. doi: 10.1186/1746-4811-8-19.

12.

Convenient determination of protein-binding DNA sequences using quadruple 9-mer-based microarray and DsRed-monomer fusion protein.

Kim MJ, Chung PJ, Lee TH, Kim TH, Nahm BH, Kim YK.

Methods Mol Biol. 2012;786:65-77. doi: 10.1007/978-1-61779-292-2_4.

PMID:
21938620
13.

OsbHLH148, a basic helix-loop-helix protein, interacts with OsJAZ proteins in a jasmonate signaling pathway leading to drought tolerance in rice.

Seo JS, Joo J, Kim MJ, Kim YK, Nahm BH, Song SI, Cheong JJ, Lee JS, Kim JK, Choi YD.

Plant J. 2011 Mar;65(6):907-21. doi: 10.1111/j.1365-313X.2010.04477.x. Epub 2011 Feb 18.

14.

Overexpression of the ethylene-responsive factor gene BrERF4 from Brassica rapa increases tolerance to salt and drought in Arabidopsis plants.

Seo YJ, Park JB, Cho YJ, Jung C, Seo HS, Park SK, Nahm BH, Song JT.

Mol Cells. 2010 Sep;30(3):271-7. doi: 10.1007/s10059-010-0114-z. Epub 2010 Aug 23.

15.

Complete genome sequence analysis of Leuconostoc kimchii IMSNU 11154.

Oh HM, Cho YJ, Kim BK, Roe JH, Kang SO, Nahm BH, Jeong G, Han HU, Chun J.

J Bacteriol. 2010 Jul;192(14):3844-5. doi: 10.1128/JB.00508-10. Epub 2010 May 21.

16.

Quadruple 9-mer-based protein binding microarray with DsRed fusion protein.

Kim MJ, Lee TH, Pahk YM, Kim YH, Park HM, Choi YD, Nahm BH, Kim YK.

BMC Mol Biol. 2009 Sep 18;10:91. doi: 10.1186/1471-2199-10-91.

17.

RiceArrayNet: a database for correlating gene expression from transcriptome profiling, and its application to the analysis of coexpressed genes in rice.

Lee TH, Kim YK, Pham TT, Song SI, Kim JK, Kang KY, An G, Jung KH, Galbraith DW, Kim M, Yoon UH, Nahm BH.

Plant Physiol. 2009 Sep;151(1):16-33. doi: 10.1104/pp.109.139030. Epub 2009 Jul 15.

18.

Subcellular localization of rice histone deacetylases in organelles.

Chung PJ, Kim YS, Park SH, Nahm BH, Kim JK.

FEBS Lett. 2009 Jul 7;583(13):2249-54. doi: 10.1016/j.febslet.2009.06.003. Epub 2009 Jun 6.

19.

The histone deacetylase OsHDAC1 epigenetically regulates the OsNAC6 gene that controls seedling root growth in rice.

Chung PJ, Kim YS, Jeong JS, Park SH, Nahm BH, Kim JK.

Plant J. 2009 Sep;59(5):764-76. doi: 10.1111/j.1365-313X.2009.03908.x. Epub 2009 May 4.

20.

Complete genome sequence of Burkholderia glumae BGR1.

Lim J, Lee TH, Nahm BH, Choi YD, Kim M, Hwang I.

J Bacteriol. 2009 Jun;191(11):3758-9. doi: 10.1128/JB.00349-09. Epub 2009 Mar 27.

21.

GBParsy: a GenBank flatfile parser library with high speed.

Lee TH, Kim YK, Nahm BH.

BMC Bioinformatics. 2008 Jul 25;9:321. doi: 10.1186/1471-2105-9-321.

22.

Microarray detection of food-borne pathogens using specific probes prepared by comparative genomics.

Kim HJ, Park SH, Lee TH, Nahm BH, Kim YR, Kim HY.

Biosens Bioelectron. 2008 Oct 15;24(2):238-46. doi: 10.1016/j.bios.2008.03.019. Epub 2008 Mar 29.

PMID:
18448324
23.

Growth retardation and death of rice plants irradiated with carbon ion beams is preceded by very early dose- and time-dependent gene expression changes.

Rakwal R, Kimura S, Shibato J, Nojima K, Kim YK, Nahm BH, Jwa NS, Endo S, Tanaka K, Iwahashi H.

Mol Cells. 2008 Apr 30;25(2):272-8. Epub 2008 Mar 31.

24.

Overexpression of AtMYB44 enhances stomatal closure to confer abiotic stress tolerance in transgenic Arabidopsis.

Jung C, Seo JS, Han SW, Koo YJ, Kim CH, Song SI, Nahm BH, Choi YD, Cheong JJ.

Plant Physiol. 2008 Feb;146(2):623-35. Epub 2007 Dec 27.

25.

Survey of differentially expressed proteins and genes in jasmonic acid treated rice seedling shoot and root at the proteomics and transcriptomics levels.

Cho K, Agrawal GK, Shibato J, Jung YH, Kim YK, Nahm BH, Jwa NS, Tamogami S, Han O, Kohda K, Iwahashi H, Rakwal R.

J Proteome Res. 2007 Sep;6(9):3581-603. Epub 2007 Aug 21.

PMID:
17711327
26.

Deep and comparative analysis of the mycelium and appressorium transcriptomes of Magnaporthe grisea using MPSS, RL-SAGE, and oligoarray methods.

Gowda M, Venu RC, Raghupathy MB, Nobuta K, Li H, Wing R, Stahlberg E, Couglan S, Haudenschild CD, Dean R, Nahm BH, Meyers BC, Wang GL.

BMC Genomics. 2006 Dec 8;7:310.

27.

Identification of Salmonella enterica serovar Typhimurium using specific PCR primers obtained by comparative genomics in Salmonella serovars.

Kim HJ, Park SH, Lee TH, Nahm BH, Chung YH, Seo KH, Kim HY.

J Food Prot. 2006 Jul;69(7):1653-61.

PMID:
16865900
28.

Bases of biocontrol: sequence predicts synthesis and mode of action of agrocin 84, the Trojan horse antibiotic that controls crown gall.

Kim JG, Park BK, Kim SU, Choi D, Nahm BH, Moon JS, Reader JS, Farrand SK, Hwang I.

Proc Natl Acad Sci U S A. 2006 Jun 6;103(23):8846-51. Epub 2006 May 26.

29.

Rice Undeveloped Tapetum1 is a major regulator of early tapetum development.

Jung KH, Han MJ, Lee YS, Kim YW, Hwang I, Kim MJ, Kim YK, Nahm BH, An G.

Plant Cell. 2005 Oct;17(10):2705-22. Epub 2005 Sep 2.

30.

Arabidopsis CBF3/DREB1A and ABF3 in transgenic rice increased tolerance to abiotic stress without stunting growth.

Oh SJ, Song SI, Kim YS, Jang HJ, Kim SY, Kim M, Kim YK, Nahm BH, Kim JK.

Plant Physiol. 2005 May;138(1):341-51. Epub 2005 Apr 15.

31.

Matrix attachment region from the chicken lysozyme locus reduces variability in transgene expression and confers copy number-dependence in transgenic rice plants.

Oh SJ, Jeong JS, Kim EH, Yi NR, Yi SI, Jang IC, Kim YS, Suh SC, Nahm BH, Kim JK.

Plant Cell Rep. 2005 Jun;24(3):145-54. Epub 2005 Feb 16.

PMID:
15714322
32.
33.

Spotted leaf11, a negative regulator of plant cell death and defense, encodes a U-box/armadillo repeat protein endowed with E3 ubiquitin ligase activity.

Zeng LR, Qu S, Bordeos A, Yang C, Baraoidan M, Yan H, Xie Q, Nahm BH, Leung H, Wang GL.

Plant Cell. 2004 Oct;16(10):2795-808. Epub 2004 Sep 17.

34.
38.

Quantitative measurement of serum allergen-specific IgE on protein chip.

Kim TE, Park SW, Cho NY, Choi SY, Yong TS, Nahm BH, Lee S, Noh G.

Exp Mol Med. 2002 May 31;34(2):152-8.

PMID:
12085991
39.

In Planta visual monitoring of green fluorescent protein in transgenic rice plants.

Chung BC, Kim JK, Nahm BH, Lee CH.

Mol Cells. 2000 Aug 31;10(4):411-4.

40.

Analysis of expressed sequence tags from Brassica rapa L. ssp. pekinensis.

Lim JY, Shin CS, Chung EJ, Kim JS, Kim HU, Oh SJ, Choi WB, Ryou CS, Kim JB, Kwon MS, Chung TY, Song SI, Kim JK, Nahm BH, Hwang YS, Eun MY, Lee JS, Cheong JJ, Choi YD.

Mol Cells. 2000 Aug 31;10(4):399-404.

41.

Sequencing and chromosomal localization of the RA138 gene encoding a rice allergenic protein.

Oh SJ, Lee MC, Cho YG, Kim JK, Nahm BH.

Mol Cells. 1998 Apr 30;8(2):175-80.

42.

Triprimer-PCR method: rapid and reliable detection of transgenes in transgenic rice plants.

Lee DK, Seok SJ, Jang IC, Nahm BH, Kim JK.

Mol Cells. 1998 Feb 28;8(1):101-6.

43.

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