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Items: 45

1.

Biochemical and Spectroscopic Characterizations of a Hybrid Light-Harvesting Reaction Center Core Complex.

Kimura Y, Hashimoto K, Akimoto S, Takenouchi M, Suzuki K, Kishi R, Imanishi M, Takenaka S, Madigan MT, Nagashima KVP, Wang-Otomo ZY.

Biochemistry. 2018 Jul 31;57(30):4496-4503. doi: 10.1021/acs.biochem.8b00644. Epub 2018 Jul 17.

PMID:
29965735
2.

Probing structure-function relationships in early events in photosynthesis using a chimeric photocomplex.

Nagashima KVP, Sasaki M, Hashimoto K, Takaichi S, Nagashima S, Yu LJ, Abe Y, Gotou K, Kawakami T, Takenouchi M, Shibuya Y, Yamaguchi A, Ohno T, Shen JR, Inoue K, Madigan MT, Kimura Y, Wang-Otomo ZY.

Proc Natl Acad Sci U S A. 2017 Oct 10;114(41):10906-10911. doi: 10.1073/pnas.1703584114. Epub 2017 Sep 21.

3.

Effects of the deletion of hup genes encoding the uptake hydrogenase on the activity of hydrogen production in the purple photosynthetic bacterium Rubrivivax gelatinosus IL144.

Sato T, Inoue K, Sakurai H, Nagashima KVP.

J Gen Appl Microbiol. 2017 Nov 17;63(5):274-279. doi: 10.2323/jgam.2017.01.003. Epub 2017 Sep 12.

4.

Exchange and complementation of genes coding for photosynthetic reaction center core subunits among purple bacteria.

Nagashima KV, Verméglio A, Fusada N, Nagashima S, Shimada K, Inoue K.

J Mol Evol. 2014 Aug;79(1-2):52-62. doi: 10.1007/s00239-014-9634-z. Epub 2014 Jul 31.

PMID:
25080366
5.

Complete genome sequence of phototrophic betaproteobacterium Rubrivivax gelatinosus IL144.

Nagashima S, Kamimura A, Shimizu T, Nakamura-Isaki S, Aono E, Sakamoto K, Ichikawa N, Nakazawa H, Sekine M, Yamazaki S, Fujita N, Shimada K, Hanada S, Nagashima KV.

J Bacteriol. 2012 Jul;194(13):3541-2. doi: 10.1128/JB.00511-12.

6.

Complete genome sequence of Bradyrhizobium sp. S23321: insights into symbiosis evolution in soil oligotrophs.

Okubo T, Tsukui T, Maita H, Okamoto S, Oshima K, Fujisawa T, Saito A, Futamata H, Hattori R, Shimomura Y, Haruta S, Morimoto S, Wang Y, Sakai Y, Hattori M, Aizawa S, Nagashima KV, Masuda S, Hattori T, Yamashita A, Bao Z, Hayatsu M, Kajiya-Kanegae H, Yoshinaga I, Sakamoto K, Toyota K, Nakao M, Kohara M, Anda M, Niwa R, Jung-Hwan P, Sameshima-Saito R, Tokuda S, Yamamoto S, Yamamoto S, Yokoyama T, Akutsu T, Nakamura Y, Nakahira-Yanaka Y, Takada Hoshino Y, Hirakawa H, Mitsui H, Terasawa K, Itakura M, Sato S, Ikeda-Ohtsubo W, Sakakura N, Kaminuma E, Minamisawa K.

Microbes Environ. 2012;27(3):306-15. Epub 2012 Mar 28.

7.

Diversity of purple phototrophic bacteria, inferred from pufM gene, within epilithic biofilm in Tama River, Japan.

Hirose S, Nagashima KV, Matsuura K, Haruta S.

Microbes Environ. 2012;27(3):327-9. Epub 2012 Mar 23.

8.

Photo-induced electron transfer in intact cells of Rubrivivax gelatinosus mutants deleted in the RC-bound tetraheme cytochrome: insight into evolution of photosynthetic electron transport.

Verméglio A, Nagashima S, Alric J, Arnoux P, Nagashima KV.

Biochim Biophys Acta. 2012 May;1817(5):689-96. doi: 10.1016/j.bbabio.2012.01.011. Epub 2012 Jan 28.

9.

Photocurrent and electronic activities of oriented-His-tagged photosynthetic light-harvesting/reaction center core complexes assembled onto a gold electrode.

Kondo M, Iida K, Dewa T, Tanaka H, Ogawa T, Nagashima S, Nagashima KV, Shimada K, Hashimoto H, Gardiner AT, Cogdell RJ, Nango M.

Biomacromolecules. 2012 Feb 13;13(2):432-8. doi: 10.1021/bm201457s. Epub 2012 Feb 1.

PMID:
22239547
10.

The cytochrome c₈ involved in the nitrite reduction pathway acts also as electron donor to the photosynthetic reaction center in Rubrivivax gelatinosus.

Nagashima S, Shimada K, Verméglio A, Nagashima KV.

Biochim Biophys Acta. 2011 Feb;1807(2):189-96. doi: 10.1016/j.bbabio.2010.10.020. Epub 2010 Nov 2.

11.

Cytochrome c4 can be involved in the photosynthetic electron transfer system in the purple bacterium Rubrivivax gelatinosus.

Ohmine M, Matsuura K, Shimada K, Alric J, Verméglio A, Nagashima KV.

Biochemistry. 2009 Sep 29;48(38):9132-9. doi: 10.1021/bi901202m.

PMID:
19697907
12.

Characterization of a blue-copper protein, auracyanin, of the filamentous anoxygenic phototrophic bacterium Roseiflexus castenholzii.

Tsukatani Y, Nakayama N, Shimada K, Mino H, Itoh S, Matsuura K, Hanada S, Nagashima KV.

Arch Biochem Biophys. 2009 Oct 1;490(1):57-62. doi: 10.1016/j.abb.2009.08.003. Epub 2009 Aug 14.

PMID:
19683508
13.

A new membrane-bound cytochrome c works as an electron donor to the photosynthetic reaction center complex in the purple bacterium, Rhodovulum sulfidophilum.

Kimura Y, Alric J, Verméglio A, Masuda S, Hagiwara Y, Matsuura K, Shimada K, Nagashima KV.

J Biol Chem. 2007 Mar 2;282(9):6463-72. Epub 2006 Dec 30.

14.

Kinetic performance and energy profile in a roller coaster electron transfer chain: a study of modified tetraheme-reaction center constructs.

Alric J, Lavergne J, Rappaport F, Verméglio A, Matsuura K, Shimada K, Nagashima KV.

J Am Chem Soc. 2006 Mar 29;128(12):4136-45.

PMID:
16551123
15.
16.

Phylogenetic distribution of unusual triheme to tetraheme cytochrome subunit in the reaction center complex of purple photosynthetic bacteria.

Tsukatani Y, Matsuura K, Masuda S, Shimada K, Hiraishi A, Nagashima KV.

Photosynth Res. 2004;79(1):83-91.

PMID:
16228402
17.

Role of trehalose synthesis pathways in salt tolerance mechanism of Rhodobacter sphaeroides f. sp. denitrificans IL106.

Makihara F, Tsuzuki M, Sato K, Masuda S, Nagashima KV, Abo M, Okubo A.

Arch Microbiol. 2005 Oct;184(1):56-65. Epub 2005 Nov 3.

PMID:
16052332
18.
19.

Electrostatic interaction between redox cofactors in photosynthetic reaction centers.

Alric J, Cuni A, Maki H, Nagashima KV, Verméglio A, Rappaport F.

J Biol Chem. 2004 Nov 12;279(46):47849-55. Epub 2004 Aug 30.

20.

Two distinct binding sites for high potential iron-sulfur protein and cytochrome c on the reaction center-bound cytochrome of Rubrivivax gelatinosus.

Alric J, Yoshida M, Nagashima KV, Hienerwadel R, Parot P, Verméglio A, Chen SW, Pellequer JL.

J Biol Chem. 2004 Jul 30;279(31):32545-53. Epub 2004 May 19. Erratum in: J Biol Chem. 2004 Oct 29;279(44):46350.

21.

Structural and functional characterization of the unusual triheme cytochrome bound to the reaction center of Rhodovulum sulfidophilum.

Alric J, Tsukatani Y, Yoshida M, Matsuura K, Shimada K, Hienerwadel R, Schoepp-Cothenet B, Nitschke W, Nagashima KV, Verméglio A.

J Biol Chem. 2004 Jun 18;279(25):26090-7. Epub 2004 Apr 6.

22.

Complex II from phototrophic purple bacterium Rhodoferax fermentans displays rhodoquinol-fumarate reductase activity.

Miyadera H, Hiraishi A, Miyoshi H, Sakamoto K, Mineki R, Murayama K, Nagashima KV, Matsuura K, Kojima S, Kita K.

Eur J Biochem. 2003 Apr;270(8):1863-74.

23.
25.

Mutational analyses of the photosynthetic reaction center-bound triheme cytochrome subunit and cytochrome c2 in the purple bacterium Rhodovulum sulfidophilum.

Masuda S, Tsukatani Y, Kimura Y, Nagashima KV, Shimada K, Matsuura K.

Biochemistry. 2002 Sep 17;41(37):11211-7.

PMID:
12220186
26.

Photosynthetic apparatus in Roseateles depolymerans 61A is transcriptionally induced by carbon limitation.

Suyama T, Shigematsu T, Suzuki T, Tokiwa Y, Kanagawa T, Nagashima KV, Hanada S.

Appl Environ Microbiol. 2002 Apr;68(4):1665-73.

27.

Phytoene desaturase, CrtI, of the purple photosynthetic bacterium, Rubrivivax gelatinosus, produces both neurosporene and lycopene.

Harada J, Nagashima KV, Takaichi S, Misawa N, Matsuura K, Shimada K.

Plant Cell Physiol. 2001 Oct;42(10):1112-8.

PMID:
11673627
28.
29.

Horizontal transfer of the photosynthesis gene cluster and operon rearrangement in purple bacteria.

Igarashi N, Harada J, Nagashima S, Matsuura K, Shimada K, Nagashima KV.

J Mol Evol. 2001 Apr;52(4):333-41.

PMID:
11343129
30.

Different mechanisms of the binding of soluble electron donors to the photosynthetic reaction center of Rubrivivax gelatinosus and Blastochloris viridis.

Osyczka A, Nagashima KV, Sogabe S, Miki K, Shimada K, Matsuura K.

J Biol Chem. 2001 Jun 29;276(26):24108-12. Epub 2001 Apr 19.

32.
33.

Dark aerobic growth conditions induce the synthesis of a high midpoint potential cytochrome c8 in the photosynthetic bacterium Rubrivivax gelatinosus.

Menin L, Yoshida M, Jaquinod M, Nagashima KV, Matsuura K, Parot P, Verméglio A.

Biochemistry. 1999 Nov 16;38(46):15238-44.

PMID:
10563807
34.
35.

A new cytochrome subunit bound to the photosynthetic reaction center in the purple bacterium, Rhodovulum sulfidophilum.

Masuda S, Yoshida M, Nagashima KV, Shimada K, Matsuura K.

J Biol Chem. 1999 Apr 16;274(16):10795-801.

36.
37.

Phylogeny and photosynthetic features of Thiobacillus acidophilus and related acidophilic bacteria: its transfer to the genus Acidiphilium as Acidiphilium acidophilum comb. nov.

Hiraishi A, Nagashima KV, Matsuura K, Shimada K, Takaichi S, Wakao N, Katayama Y.

Int J Syst Bacteriol. 1998 Oct;48 Pt 4:1389-98.

PMID:
9828441
38.

Interaction site for soluble cytochromes on the tetraheme cytochrome subunit bound to the bacterial photosynthetic reaction center mapped by site-directed mutagenesis.

Osyczka A, Nagashima KV, Sogabe S, Miki K, Yoshida M, Shimada K, Matsuura K.

Biochemistry. 1998 Aug 25;37(34):11732-44.

PMID:
9718296
39.
40.

Horizontal transfer of genes coding for the photosynthetic reaction centers of purple bacteria.

Nagashima KV, Hiraishi A, Shimada K, Matsuura K.

J Mol Evol. 1997 Aug;45(2):131-6.

PMID:
9236272
41.

Porphyrobacter tepidarius sp. nov., a moderately thermophilic aerobic photosynthetic bacterium isolated from a hot spring.

Hanada S, Kawase Y, Hiraishi A, Takaichi S, Matsuura K, Shimada K, Nagashima KV.

Int J Syst Bacteriol. 1997 Apr;47(2):408-13.

PMID:
9103629
44.
45.

Phylogenetic analysis of photosynthetic genes of Rhodocyclus gelatinosus: Possibility of horizontal gene transfer in purple bacteria.

Nagashima KV, Shimada K, Matsuura K.

Photosynth Res. 1993 Jun;36(3):185-91. doi: 10.1007/BF00033037.

PMID:
24318922

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