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Items: 1 to 50 of 96

1.

ChaosNet: A chaos based artificial neural network architecture for classification.

Balakrishnan HN, Kathpalia A, Saha S, Nagaraj N.

Chaos. 2019 Nov;29(11):113125. doi: 10.1063/1.5120831.

PMID:
31779350
2.

SILAC-based quantitative proteomics using mass spectrometry quantifies endoplasmic reticulum stress in whole HeLa cells.

Itzhak DN, Sacco F, Nagaraj N, Tyanova S, Mann M, Murgia M.

Dis Model Mech. 2019 Nov 11;12(11). pii: dmm040741. doi: 10.1242/dmm.040741.

3.

Causal stability and synchronization.

Kathpalia A, Nagaraj N.

Chaos. 2019 Sep;29(9):091103. doi: 10.1063/1.5121193.

PMID:
31575134
4.

First Community-Wide, Comparative Cross-Linking Mass Spectrometry Study.

Iacobucci C, Piotrowski C, Aebersold R, Amaral BC, Andrews P, Bernfur K, Borchers C, Brodie NI, Bruce JE, Cao Y, Chaignepain S, Chavez JD, Claverol S, Cox J, Davis T, Degliesposti G, Dong MQ, Edinger N, Emanuelsson C, Gay M, Götze M, Gomes-Neto F, Gozzo FC, Gutierrez C, Haupt C, Heck AJR, Herzog F, Huang L, Hoopmann MR, Kalisman N, Klykov O, Kukačka Z, Liu F, MacCoss MJ, Mechtler K, Mesika R, Moritz RL, Nagaraj N, Nesati V, Neves-Ferreira AGC, Ninnis R, Novák P, O'Reilly FJ, Pelzing M, Petrotchenko E, Piersimoni L, Plasencia M, Pukala T, Rand KD, Rappsilber J, Reichmann D, Sailer C, Sarnowski CP, Scheltema RA, Schmidt C, Schriemer DC, Shi Y, Skehel JM, Slavin M, Sobott F, Solis-Mezarino V, Stephanowitz H, Stengel F, Stieger CE, Trabjerg E, Trnka M, Vilaseca M, Viner R, Xiang Y, Yilmaz S, Zelter A, Ziemianowicz D, Leitner A, Sinz A.

Anal Chem. 2019 Jun 4;91(11):6953-6961. doi: 10.1021/acs.analchem.9b00658. Epub 2019 May 22.

5.

A Middle Path in the Surgical Management of Glomus Jugulare: Lessons Learnt from a Short Series.

Pai BS, Bysani PR, Nagaraj NM.

Asian J Neurosurg. 2019 Jan-Mar;14(1):96-101. doi: 10.4103/ajns.AJNS_232_17.

6.

Longitudinal changes in hip geometry in relation to the final menstrual period: Study of Women's Health Across the Nation (SWAN).

Nagaraj N, Boudreau RM, Danielson ME, Greendale GA, Karlamangla AS, Beck TJ, Cauley JA.

Bone. 2019 May;122:237-245. doi: 10.1016/j.bone.2019.02.016. Epub 2019 Mar 3.

PMID:
30840919
7.

A novel perturbation based compression complexity measure for networks.

Virmani M, Nagaraj N.

Heliyon. 2019 Feb 18;5(2):e01181. doi: 10.1016/j.heliyon.2019.e01181. eCollection 2019 Feb.

8.

Correlation of hepatorenal dysfunction in pediatric malaria.

Nagaraj N, Berwal PK, Srinivas A, Prakash P, Ramesh MS, Berwal A.

Trop Parasitol. 2018 Jul-Dec;8(2):83-87. doi: 10.4103/tp.TP_2_16. Epub 2018 Dec 27.

9.

Is There a Link Between Childhood Family Violence and Adult Health? Understanding Family Violence Amongst South Asian American Women.

Nagaraj NC, Vyas AN, McDonnell KA.

J Immigr Minor Health. 2019 Oct;21(5):978-1003. doi: 10.1007/s10903-018-0829-z.

PMID:
30327901
10.

Working Memory and Auditory Processing in School-Age Children.

Magimairaj BM, Nagaraj NK.

Lang Speech Hear Serv Sch. 2018 Jul 5;49(3):409-423. doi: 10.1044/2018_LSHSS-17-0099. Erratum in: Lang Speech Hear Serv Sch. 2019 Jul 12;50(3):457.

PMID:
29978209
11.

Dominance of persistence over adaptation in forward masking.

DiGiovanni JJ, Lynch EE, Nagaraj NK, Ries DT.

Atten Percept Psychophys. 2018 Oct;80(7):1863-1869. doi: 10.3758/s13414-018-1551-6.

PMID:
29971750
12.

Children's Speech Perception in Noise: Evidence for Dissociation From Language and Working Memory.

Magimairaj BM, Nagaraj NK, Benafield NJ.

J Speech Lang Hear Res. 2018 May 17;61(5):1294-1305. doi: 10.1044/2018_JSLHR-H-17-0312.

PMID:
29800354
13.

Associations Between Lean Mass, Muscle Strength and Power, and Skeletal Size, Density and Strength in Older Men.

Chalhoub D, Boudreau R, Greenspan S, Newman AB, Zmuda J, Frank-Wilson AW, Nagaraj N, Hoffman AR, Lane NE, Stefanick ML, Barrett-Connor E, Dam T, Cawthon PM, Orwoll ES, Cauley JA; Osteoporotic Fractures in Men (MrOS) Study Research Group.

J Bone Miner Res. 2018 Sep;33(9):1612-1621. doi: 10.1002/jbmr.3458. Epub 2018 Jun 12.

14.

Is Temporary Proximal Artery Clipping in Arteriovenous Malformation Surgery Safe?

Pai B, Nagaraj NM, Hegde S.

Turk Neurosurg. 2019;29(2):164-170. doi: 10.5137/1019-5149.JTN.22071-17.2.

15.

Role of working memory and lexical knowledge in perceptual restoration of interrupted speech.

Nagaraj NK, Magimairaj BM.

J Acoust Soc Am. 2017 Dec;142(6):3756. doi: 10.1121/1.5018429.

PMID:
29289104
16.

Understanding Health, Violence, and Acculturation Among South Asian Women in the US.

Nagaraj NC, Vyas AN, McDonnell KA, DiPietro L.

J Community Health. 2018 Jun;43(3):543-551. doi: 10.1007/s10900-017-0450-4.

PMID:
29218541
17.

Vagus Nerve Stimulation Modulates Complexity of Heart Rate Variability Differently during Sleep and Wakefulness.

Balasubramanian K, Harikumar K, Nagaraj N, Pati S.

Ann Indian Acad Neurol. 2017 Oct-Dec;20(4):403-407. doi: 10.4103/aian.AIAN_148_17.

18.

Working Memory and Speech Comprehension in Older Adults With Hearing Impairment.

Nagaraj NK.

J Speech Lang Hear Res. 2017 Oct 17;60(10):2949-2964. doi: 10.1044/2017_JSLHR-H-17-0022.

PMID:
29049596
19.

A proteomic atlas of insulin signalling reveals tissue-specific mechanisms of longevity assurance.

Tain LS, Sehlke R, Jain C, Chokkalingam M, Nagaraj N, Essers P, Rassner M, Grönke S, Froelich J, Dieterich C, Mann M, Alic N, Beyer A, Partridge L.

Mol Syst Biol. 2017 Sep 15;13(9):939. doi: 10.15252/msb.20177663.

20.

Single Muscle Fiber Proteomics Reveals Fiber-Type-Specific Features of Human Muscle Aging.

Murgia M, Toniolo L, Nagaraj N, Ciciliot S, Vindigni V, Schiaffino S, Reggiani C, Mann M.

Cell Rep. 2017 Jun 13;19(11):2396-2409. doi: 10.1016/j.celrep.2017.05.054.

21.

A study of acute kidney injury in hospitalized preterm neonates in NICU.

Nagaraj N, Berwal PK, Srinivas A, Berwal A.

J Neonatal Perinatal Med. 2016;9(4):417-421. doi: 10.3233/NPM-161614.

PMID:
28009331
22.

Aging and cardiovascular complexity: effect of the length of RR tachograms.

Balasubramanian K, Nagaraj N.

PeerJ. 2016 Dec 6;4:e2755. eCollection 2016.

23.

Amplitude modulation detection with concurrent frequency modulation.

Nagaraj NK.

J Acoust Soc Am. 2016 Sep;140(3):EL251.

PMID:
27914426
24.

A study of neurosonogram abnormalities, clinical correlation with neurosonogram findings, and immediate outcome of high-risk neonates in Neonatal Intensive Care Unit.

Nagaraj N, Berwal PK, Srinivas A, Sehra R, Swami S, Jeevaji P, Swami G, Choudary L, Berwal A.

J Pediatr Neurosci. 2016 Jul-Sep;11(3):200-205.

25.

Psychosocial Illness in Children with Type 1 Diabetes Mellitus: Prevalence, Pattern and Risk Factors.

Khandelwal S, Sengar GS, Sharma M, Choudhary S, Nagaraj N.

J Clin Diagn Res. 2016 Sep;10(9):SC05-SC08. Epub 2016 Sep 1.

26.

Use of Baby Isao Simulator and Standardized Parents in Hearing Screening and Parent Counseling Education.

Alanazi AA, Nicholson N, Atcherson SR, Franklin C, Anders M, Nagaraj N, Franklin J, Highley P.

Am J Audiol. 2016 Sep 1;25(3):211-23. doi: 10.1044/2016_AJA-16-0029.

PMID:
27653494
27.

Overview of Central Auditory Processing Deficits in Older Adults.

Atcherson SR, Nagaraj NK, Kennett SE, Levisee M.

Semin Hear. 2015 Aug;36(3):150-61. doi: 10.1055/s-0035-1555118.

28.

Calsequestrins in skeletal and cardiac muscle from adult Danio rerio.

Furlan S, Mosole S, Murgia M, Nagaraj N, Argenton F, Volpe P, Nori A.

J Muscle Res Cell Motil. 2016 Apr;37(1-2):27-39. doi: 10.1007/s10974-015-9432-2. Epub 2015 Nov 20.

PMID:
26585961
29.

Complement proteins and arterial calcification in middle aged women: Cross-sectional effect of cardiovascular fat. The SWAN Cardiovascular Fat Ancillary Study.

Nagaraj N, Matthews KA, Shields KJ, Barinas-Mitchell E, Budoff MJ, El Khoudary SR.

Atherosclerosis. 2015 Dec;243(2):533-9. doi: 10.1016/j.atherosclerosis.2015.10.095. Epub 2015 Oct 24.

30.

A human interactome in three quantitative dimensions organized by stoichiometries and abundances.

Hein MY, Hubner NC, Poser I, Cox J, Nagaraj N, Toyoda Y, Gak IA, Weisswange I, Mansfeld J, Buchholz F, Hyman AA, Mann M.

Cell. 2015 Oct 22;163(3):712-23. doi: 10.1016/j.cell.2015.09.053. Epub 2015 Oct 22.

31.

No evidence of relation between working memory and perception of interrupted speech in young adults.

Nagaraj NK, Knapp AN.

J Acoust Soc Am. 2015 Aug;138(2):EL145-50. doi: 10.1121/1.4927635.

PMID:
26328740
32.

Parasite-induced ER stress response in hepatocytes facilitates Plasmodium liver stage infection.

Inácio P, Zuzarte-Luís V, Ruivo MT, Falkard B, Nagaraj N, Rooijers K, Mann M, Mair G, Fidock DA, Mota MM.

EMBO Rep. 2015 Aug;16(8):955-64. doi: 10.15252/embr.201439979. Epub 2015 Jun 25.

33.

High- and Low-Frequency Decrement Contribution to Spectral Enhancement.

DiGiovanni JJ, Riffle TL, Nagaraj NK.

Am J Audiol. 2015 Sep;24(3):432-9. doi: 10.1044/2015_AJA-14-0087.

PMID:
25996845
34.

DNA repair. Proteomics reveals dynamic assembly of repair complexes during bypass of DNA cross-links.

Räschle M, Smeenk G, Hansen RK, Temu T, Oka Y, Hein MY, Nagaraj N, Long DT, Walter JC, Hofmann K, Storchova Z, Cox J, Bekker-Jensen S, Mailand N, Mann M.

Science. 2015 May 1;348(6234):1253671. doi: 10.1126/science.1253671. Epub 2015 Apr 30.

35.

Phosphoproteomics analysis of a clinical Mycobacterium tuberculosis Beijing isolate: expanding the mycobacterial phosphoproteome catalog.

Fortuin S, Tomazella GG, Nagaraj N, Sampson SL, Gey van Pittius NC, Soares NC, Wiker HG, de Souza GA, Warren RM.

Front Microbiol. 2015 Feb 10;6:6. doi: 10.3389/fmicb.2015.00006. eCollection 2015.

36.

Single muscle fiber proteomics reveals unexpected mitochondrial specialization.

Murgia M, Nagaraj N, Deshmukh AS, Zeiler M, Cancellara P, Moretti I, Reggiani C, Schiaffino S, Mann M.

EMBO Rep. 2015 Mar;16(3):387-95. doi: 10.15252/embr.201439757. Epub 2015 Feb 2.

37.

Deep proteomics of mouse skeletal muscle enables quantitation of protein isoforms, metabolic pathways, and transcription factors.

Deshmukh AS, Murgia M, Nagaraj N, Treebak JT, Cox J, Mann M.

Mol Cell Proteomics. 2015 Apr;14(4):841-53. doi: 10.1074/mcp.M114.044222. Epub 2015 Jan 22.

38.

Phosphorylation of TET proteins is regulated via O-GlcNAcylation by the O-linked N-acetylglucosamine transferase (OGT).

Bauer C, Göbel K, Nagaraj N, Colantuoni C, Wang M, Müller U, Kremmer E, Rottach A, Leonhardt H.

J Biol Chem. 2015 Feb 20;290(8):4801-12. doi: 10.1074/jbc.M114.605881. Epub 2015 Jan 7.

39.

Detection of multiregional transient myocardial ischaemia using a novel 80-electrode body surface Delta map.

Zeb M, Nagaraj N, Curzen N.

Int J Cardiol. 2015 Feb 15;181:114-6. doi: 10.1016/j.ijcard.2014.12.009. Epub 2014 Dec 3. No abstract available.

PMID:
25497532
40.

Cell-type-resolved quantitative proteomics of murine liver.

Azimifar SB, Nagaraj N, Cox J, Mann M.

Cell Metab. 2014 Dec 2;20(6):1076-87. doi: 10.1016/j.cmet.2014.11.002.

41.

Global proteome turnover analyses of the Yeasts S. cerevisiae and S. pombe.

Christiano R, Nagaraj N, Fröhlich F, Walther TC.

Cell Rep. 2014 Dec 11;9(5):1959-1965. doi: 10.1016/j.celrep.2014.10.065. Epub 2014 Nov 26.

42.

Time-resolved dissection of early phosphoproteome and ensuing proteome changes in response to TGF-β.

D'Souza RC, Knittle AM, Nagaraj N, van Dinther M, Choudhary C, ten Dijke P, Mann M, Sharma K.

Sci Signal. 2014 Jul 22;7(335):rs5. doi: 10.1126/scisignal.2004856.

PMID:
25056879
43.

Accurate proteome-wide label-free quantification by delayed normalization and maximal peptide ratio extraction, termed MaxLFQ.

Cox J, Hein MY, Luber CA, Paron I, Nagaraj N, Mann M.

Mol Cell Proteomics. 2014 Sep;13(9):2513-26. doi: 10.1074/mcp.M113.031591. Epub 2014 Jun 17.

44.

Relevant risk of carboplatin underdosing in cancer patients with normal renal function using estimated GFR: lessons from a stage I seminoma cohort.

Cathomas R, Klingbiel D, Geldart TR, Mead GM, Ellis S, Wheater M, Simmonds P, Nagaraj N, von Moos R, Fehr M.

Ann Oncol. 2014 Aug;25(8):1591-7. doi: 10.1093/annonc/mdu129. Epub 2014 Mar 25.

PMID:
24669017
45.

Minimal, encapsulated proteomic-sample processing applied to copy-number estimation in eukaryotic cells.

Kulak NA, Pichler G, Paron I, Nagaraj N, Mann M.

Nat Methods. 2014 Mar;11(3):319-24. doi: 10.1038/nmeth.2834. Epub 2014 Feb 2.

PMID:
24487582
46.

Cytokine removal on extracorporeal life support for treatment of acute endotoxemia: a randomized controlled animal study.

Weerwind PW, van der Veen FH, Gelsomino S, Nagaraj NG, Parise O, Lorusso R, Gensini GF, Maessen JG.

Int J Cardiol. 2013 Oct 12;168(5):4699-704. doi: 10.1016/j.ijcard.2013.07.175. Epub 2013 Jul 25.

PMID:
23954008
47.

Detection of transient regional myocardial ischemia using body surface Delta map in patients referred for myocardial perfusion imaging--a pilot study.

Zeb M, Garty F, Nagaraj N, Bannister W, Roderick P, Corbett S, Morgan J, Curzen N.

J Electrocardiol. 2013 Nov-Dec;46(6):627-34. doi: 10.1016/j.jelectrocard.2013.06.005. Epub 2013 Jul 15.

PMID:
23866293
48.

High performance computational analysis of large-scale proteome data sets to assess incremental contribution to coverage of the human genome.

Neuhauser N, Nagaraj N, McHardy P, Zanivan S, Scheltema R, Cox J, Mann M.

J Proteome Res. 2013 Jun 7;12(6):2858-68. doi: 10.1021/pr400181q. Epub 2013 May 6.

49.

The coming age of complete, accurate, and ubiquitous proteomes.

Mann M, Kulak NA, Nagaraj N, Cox J.

Mol Cell. 2013 Feb 21;49(4):583-90. doi: 10.1016/j.molcel.2013.01.029.

50.

Initial quantitative proteomic map of 28 mouse tissues using the SILAC mouse.

Geiger T, Velic A, Macek B, Lundberg E, Kampf C, Nagaraj N, Uhlen M, Cox J, Mann M.

Mol Cell Proteomics. 2013 Jun;12(6):1709-22. doi: 10.1074/mcp.M112.024919. Epub 2013 Feb 22.

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