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Items: 1 to 50 of 55

1.

MicroRNAs Form Triplexes with Double Stranded DNA at Sequence-Specific Binding Sites; a Eukaryotic Mechanism via which microRNAs Could Directly Alter Gene Expression.

Paugh SW, Coss DR, Bao J, Laudermilk LT, Grace CR, Ferreira AM, Waddell MB, Ridout G, Naeve D, Leuze M, LoCascio PF, Panetta JC, Wilkinson MR, Pui CH, Naeve CW, Uberbacher EC, Bonten EJ, Evans WE.

PLoS Comput Biol. 2016 Feb 4;12(2):e1004744. doi: 10.1371/journal.pcbi.1004744. eCollection 2016 Feb.

2.

The genetic basis of early T-cell precursor acute lymphoblastic leukaemia.

Zhang J, Ding L, Holmfeldt L, Wu G, Heatley SL, Payne-Turner D, Easton J, Chen X, Wang J, Rusch M, Lu C, Chen SC, Wei L, Collins-Underwood JR, Ma J, Roberts KG, Pounds SB, Ulyanov A, Becksfort J, Gupta P, Huether R, Kriwacki RW, Parker M, McGoldrick DJ, Zhao D, Alford D, Espy S, Bobba KC, Song G, Pei D, Cheng C, Roberts S, Barbato MI, Campana D, Coustan-Smith E, Shurtleff SA, Raimondi SC, Kleppe M, Cools J, Shimano KA, Hermiston ML, Doulatov S, Eppert K, Laurenti E, Notta F, Dick JE, Basso G, Hunger SP, Loh ML, Devidas M, Wood B, Winter S, Dunsmore KP, Fulton RS, Fulton LL, Hong X, Harris CC, Dooling DJ, Ochoa K, Johnson KJ, Obenauer JC, Evans WE, Pui CH, Naeve CW, Ley TJ, Mardis ER, Wilson RK, Downing JR, Mullighan CG.

Nature. 2012 Jan 11;481(7380):157-63. doi: 10.1038/nature10725.

3.

Analyzing and visualizing expression data with Spotfire.

Kaushal D, Naeve CW.

Curr Protoc Bioinformatics. 2004 Oct;Chapter 7:Unit 7.9. doi: 10.1002/0471250953.bi0709s7.

PMID:
18428735
4.

Loading and preparing data for analysis in spotfire.

Kaushal D, Naeve CW.

Curr Protoc Bioinformatics. 2004 Sep;Chapter 7:Unit 7.8. doi: 10.1002/0471250953.bi0708s6.

PMID:
18428734
5.

An overview of Spotfire for gene-expression studies.

Kaushal D, Naeve CW.

Curr Protoc Bioinformatics. 2004 Sep;Chapter 7:Unit 7.7. doi: 10.1002/0471250953.bi0707s6. Review.

PMID:
18428733
6.

An overview of Spotfire for gene-expression studies.

Kaushal D, Naeve CW.

Curr Protoc Hum Genet. 2005 May;Chapter 11:Unit 11.9. doi: 10.1002/0471142905.hg1109s45. Review.

PMID:
18428373
7.

Influenza in migratory birds and evidence of limited intercontinental virus exchange.

Krauss S, Obert CA, Franks J, Walker D, Jones K, Seiler P, Niles L, Pryor SP, Obenauer JC, Naeve CW, Widjaja L, Webby RJ, Webster RG.

PLoS Pathog. 2007 Nov;3(11):e167.

8.

Persistent host markers in pandemic and H5N1 influenza viruses.

Finkelstein DB, Mukatira S, Mehta PK, Obenauer JC, Su X, Webster RG, Naeve CW.

J Virol. 2007 Oct;81(19):10292-9. Epub 2007 Jul 25.

9.

A novel approach for the analysis of T-cell reconstitution by using a T-cell receptor beta-based oligonucleotide microarray in hematopoietic stem cell transplantation.

Chen X, Hale GA, Neale GA, Knowles J, Barfield RC, Wang YD, Kaushal D, Naeve DC, Srivastava DK, Tong X, Turner V, Naeve CW, Handgretinger R.

Exp Hematol. 2007 May;35(5):831-41.

PMID:
17577931
10.

Large-scale sequence analysis of avian influenza isolates.

Obenauer JC, Denson J, Mehta PK, Su X, Mukatira S, Finkelstein DB, Xu X, Wang J, Ma J, Fan Y, Rakestraw KM, Webster RG, Hoffmann E, Krauss S, Zheng J, Zhang Z, Naeve CW.

Science. 2006 Mar 17;311(5767):1576-80. Epub 2006 Jan 26.

11.

Treatment-specific changes in gene expression discriminate in vivo drug response in human leukemia cells.

Cheok MH, Yang W, Pui CH, Downing JR, Cheng C, Naeve CW, Relling MV, Evans WE.

Nat Genet. 2003 May;34(1):85-90. Erratum in: Nat Genet. 2003 Jun;34(2):231.

PMID:
12704389
12.

Characterization of the MLL partner gene AF15q14 involved in t(11;15)(q23;q14).

Kuefer MU, Chinwalla V, Zeleznik-Le NJ, Behm FG, Naeve CW, Rakestraw KM, Mukatira ST, Raimondi SC, Morris SW.

Oncogene. 2003 Mar 6;22(9):1418-24.

PMID:
12618768
14.

Design strategies and performance of custom DNA sequencing primers.

Buck GA, Fox JW, Gunthorpe M, Hager KM, Naeve CW, Pon RT, Adams PS, Rush J.

Biotechniques. 1999 Sep;27(3):528-36.

15.

cDNA cloning, expression pattern, and chromosomal localization of Mlf1, murine homologue of a gene involved in myelodysplasia and acute myeloid leukemia.

Hitzler JK, Witte DP, Jenkins NA, Copeland NG, Gilbert DJ, Naeve CW, Look AT, Morris SW.

Am J Pathol. 1999 Jul;155(1):53-9.

16.

Inactivating mutations and overexpression of BCL10, a caspase recruitment domain-containing gene, in MALT lymphoma with t(1;14)(p22;q32).

Zhang Q, Siebert R, Yan M, Hinzmann B, Cui X, Xue L, Rakestraw KM, Naeve CW, Beckmann G, Weisenburger DD, Sanger WG, Nowotny H, Vesely M, Callet-Bauchu E, Salles G, Dixit VM, Rosenthal A, Schlegelberger B, Morris SW.

Nat Genet. 1999 May;22(1):63-8.

PMID:
10319863
17.

Comparison of activation of CPT-11 by rabbit and human carboxylesterases for use in enzyme/prodrug therapy.

Danks MK, Morton CL, Krull EJ, Cheshire PJ, Richmond LB, Naeve CW, Pawlik CA, Houghton PJ, Potter PM.

Clin Cancer Res. 1999 Apr;5(4):917-24.

18.

HERF1, a novel hematopoiesis-specific RING finger protein, is required for terminal differentiation of erythroid cells.

Harada H, Harada Y, O'Brien DP, Rice DS, Naeve CW, Downing JR.

Mol Cell Biol. 1999 May;19(5):3808-15.

19.

Cloning and chromosomal localization of the gene encoding human cyclin D-binding Myb-like protein (hDMP1).

Bodner SM, Naeve CW, Rakestraw KM, Jones BG, Valentine VA, Valentine MB, Luthardt FW, Willman CL, Raimondi SC, Downing JR, Roussel MF, Sherr CJ, Look AT.

Gene. 1999 Mar 18;229(1-2):223-8.

PMID:
10095122
20.

Letter from the editor.

Naeve CW.

J Biomol Tech. 1999 Mar;10(1):1. No abstract available.

21.

Two candidate downstream target genes for E2A-HLF.

Kurosawa H, Goi K, Inukai T, Inaba T, Chang KS, Shinjyo T, Rakestraw KM, Naeve CW, Look AT.

Blood. 1999 Jan 1;93(1):321-32.

22.
23.

Elf-2, a rhombotin-2 binding ets transcription factor: discovery and potential role in T cell leukemia.

Wilkinson DA, Neale GA, Mao S, Naeve CW, Goorha RM.

Leukemia. 1997 Jan;11(1):86-96.

PMID:
9001422
24.

Multi-facility survey of oligonucleotide synthesis and an examination of the performance of unpurified primers in automated DNA sequencing.

Pon RT, Buck GA, Hager KM, Naeve CW, Niece RL, Robertson M, Smith AJ.

Biotechniques. 1996 Oct;21(4):680-5.

PMID:
8891221
25.

cDNA cloning, tissue distribution, and chromosomal localization of myelodysplasia/myeloid leukemia factor 2 (MLF2).

Kuefer MU, Look AT, Williams DC, Valentine V, Naeve CW, Behm FG, Mullersman JE, Yoneda-Kato N, Montgomery K, Kucherlapati R, Morris SW.

Genomics. 1996 Jul 15;35(2):392-6.

PMID:
8661158
26.

Accuracy of automated DNA sequencing: a multi-laboratory comparison of sequencing results.

Naeve CW, Buck GA, Niece RL, Pon RT, Robertson M, Smith AJ.

Biotechniques. 1995 Sep;19(3):448-53.

PMID:
7495559
27.
28.

Fusion of PAX3 to a member of the forkhead family of transcription factors in human alveolar rhabdomyosarcoma.

Shapiro DN, Sublett JE, Li B, Downing JR, Naeve CW.

Cancer Res. 1993 Nov 1;53(21):5108-12.

29.

Neutralizing epitopes of human parainfluenza virus type 3 are conformational and cannot be imitated by synthetic peptides.

Henrickson KJ, Kingsbury DW, van Wyke Coelingh KL, Naeve CW, Portner A.

Vaccine. 1991 Apr;9(4):243-9.

PMID:
1711742
30.
32.

Epitope mimicry by anti-idiotype sequences in reverse orientation.

Metzger DW, Naeve CW, Van Cleave VH.

Adv Exp Med Biol. 1989;251:187-90. Review. No abstract available.

PMID:
2481960
33.

Retrovirus-expressed hemagglutinin protects against lethal influenza virus infections.

Hunt LA, Brown DW, Robinson HL, Naeve CW, Webster RG.

J Virol. 1988 Aug;62(8):3014-9.

34.
35.

Sequence comparison of wild-type and cold-adapted B/Ann Arbor/1/66 influenza virus genes.

DeBorde DC, Donabedian AM, Herlocher ML, Naeve CW, Maassab HF.

Virology. 1988 Apr;163(2):429-43.

36.
37.

Antigenic and genetic conservation of H3 influenza virus in wild ducks.

Kida H, Kawaoka Y, Naeve CW, Webster RG.

Virology. 1987 Jul;159(1):109-19.

PMID:
2440178
38.
39.

Host cell-mediated variation in H3N2 influenza viruses.

Katz JM, Naeve CW, Webster RG.

Virology. 1987 Feb;156(2):386-95.

PMID:
3811239
40.

Resolution of a common RNA sequencing ambiguity by terminal deoxynucleotidyl transferase.

DeBorde DC, Naeve CW, Herlocher ML, Maassab HF.

Anal Biochem. 1986 Sep;157(2):275-82.

42.
43.

Alterations in the hemagglutinin associated with adaptation of influenza B virus to growth in eggs.

Robertson JS, Naeve CW, Webster RG, Bootman JS, Newman R, Schild GC.

Virology. 1985 May;143(1):166-74.

PMID:
4060580
44.
46.

Antigenic analyses of influenza virus haemagglutinins with different receptor-binding specificities.

Daniels RS, Douglas AR, Skehel JJ, Wiley DC, Naeve CW, Webster RG, Rogers GN, Paulson JC.

Virology. 1984 Oct 15;138(1):174-7.

PMID:
6208680
47.
48.

Sequence of the hemagglutinin gene from influenza virus A/Seal/Mass/1/80.

Naeve CW, Webster RG.

Virology. 1983 Sep;129(2):298-308.

PMID:
6688691
49.

Phenotypic variation in influenza virus reassortants with identical gene constellations.

Naeve CW, Webster RG, Hinshaw VS.

Virology. 1983 Jul 30;128(2):331-40.

PMID:
6612991
50.

Altered tissue tropism of human-avian reassortant influenza viruses.

Hinshaw VS, Webster RG, Naeve CW, Murphy BR.

Virology. 1983 Jul 15;128(1):260-3.

PMID:
6880029

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