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Items: 27

1.

Functional Metagenomics Reveals a New Catalytic Domain, the Metallo-β-Lactamase Superfamily Domain, Associated with Phytase Activity.

Castillo Villamizar GA, Funkner K, Nacke H, Foerster K, Daniel R.

mSphere. 2019 Jun 19;4(3). pii: e00167-19. doi: 10.1128/mSphere.00167-19.

2.

Discovery of Novel Antibiotic Resistance Determinants in Forest and Grassland Soil Metagenomes.

Willms IM, Kamran A, Aßmann NF, Krone D, Bolz SH, Fiedler F, Nacke H.

Front Microbiol. 2019 Mar 7;10:460. doi: 10.3389/fmicb.2019.00460. eCollection 2019.

3.

Characteristics of the First Protein Tyrosine Phosphatase with Phytase Activity from a Soil Metagenome.

Castillo Villamizar GA, Nacke H, Griese L, Tabernero L, Funkner K, Daniel R.

Genes (Basel). 2019 Jan 29;10(2). pii: E101. doi: 10.3390/genes10020101.

4.

Functional Metagenomics Reveals an Overlooked Diversity and Novel Features of Soil-Derived Bacterial Phosphatases and Phytases.

Castillo Villamizar GA, Nacke H, Boehning M, Herz K, Daniel R.

MBio. 2019 Jan 29;10(1). pii: e01966-18. doi: 10.1128/mBio.01966-18.

5.

Comparative Genomics and Description of Putative Virulence Factors of Melissococcus plutonius, the Causative Agent of European Foulbrood Disease in Honey Bees.

Djukic M, Erler S, Leimbach A, Grossar D, Charrière JD, Gauthier L, Hartken D, Dietrich S, Nacke H, Daniel R, Poehlein A.

Genes (Basel). 2018 Aug 20;9(8). pii: E419. doi: 10.3390/genes9080419.

6.

Links between seawater flooding, soil ammonia oxidiser communities and their response to changes in salinity.

Nacke H, Schöning I, Schindler M, Schrumpf M, Daniel R, Nicol GW, Prosser JI.

FEMS Microbiol Ecol. 2017 Nov 1;93(11). doi: 10.1093/femsec/fix144.

PMID:
29069386
7.

Adsorption mechanism of chromium(III) using biosorbents of Jatropha curcas L.

Gonçalves AC Jr, Nacke H, Schwantes D, Campagnolo MA, Miola AJ, Tarley CRT, Dragunski DC, Suquila FAC.

Environ Sci Pollut Res Int. 2017 Sep;24(27):21778-21790. doi: 10.1007/s11356-017-9749-z. Epub 2017 Aug 3.

PMID:
28770506
8.

Genome Sequence of Creatinine-Fermenting Tissierella creatinophila Strain KRE 4T (DSM 6911).

Nacke H, Daniel R, Poehlein A.

Genome Announc. 2017 Mar 23;5(12). pii: e00051-17. doi: 10.1128/genomeA.00051-17.

9.

Fine Spatial Scale Variation of Soil Microbial Communities under European Beech and Norway Spruce.

Nacke H, Goldmann K, Schöning I, Pfeiffer B, Kaiser K, Castillo-Villamizar GA, Schrumpf M, Buscot F, Daniel R, Wubet T.

Front Microbiol. 2016 Dec 22;7:2067. doi: 10.3389/fmicb.2016.02067. eCollection 2016.

10.
11.

Driving forces of soil bacterial community structure, diversity, and function in temperate grasslands and forests.

Kaiser K, Wemheuer B, Korolkow V, Wemheuer F, Nacke H, Schöning I, Schrumpf M, Daniel R.

Sci Rep. 2016 Sep 21;6:33696. doi: 10.1038/srep33696.

12.

Estimates of Soil Bacterial Ribosome Content and Diversity Are Significantly Affected by the Nucleic Acid Extraction Method Employed.

Wüst PK, Nacke H, Kaiser K, Marhan S, Sikorski J, Kandeler E, Daniel R, Overmann J.

Appl Environ Microbiol. 2016 Apr 18;82(9):2595-2607. doi: 10.1128/AEM.00019-16. Print 2016 May.

13.

Impact of Lowland Rainforest Transformation on Diversity and Composition of Soil Prokaryotic Communities in Sumatra (Indonesia).

Schneider D, Engelhaupt M, Allen K, Kurniawan S, Krashevska V, Heinemann M, Nacke H, Wijayanti M, Meryandini A, Corre MD, Scheu S, Daniel R.

Front Microbiol. 2015 Dec 8;6:1339. doi: 10.3389/fmicb.2015.01339. eCollection 2015.

14.

Microbial community composition and dynamics in high-temperature biogas reactors using industrial bioethanol waste as substrate.

Röske I, Sabra W, Nacke H, Daniel R, Zeng AP, Antranikian G, Sahm K.

Appl Microbiol Biotechnol. 2014 Nov;98(21):9095-106. doi: 10.1007/s00253-014-5906-1. Epub 2014 Jul 12.

PMID:
25012784
15.

Wastewater irrigation increases the abundance of potentially harmful gammaproteobacteria in soils in Mezquital Valley, Mexico.

Broszat M, Nacke H, Blasi R, Siebe C, Huebner J, Daniel R, Grohmann E.

Appl Environ Microbiol. 2014 Sep;80(17):5282-91. doi: 10.1128/AEM.01295-14. Epub 2014 Jun 20.

16.

Land use type significantly affects microbial gene transcription in soil.

Nacke H, Fischer C, Thürmer A, Meinicke P, Daniel R.

Microb Ecol. 2014 May;67(4):919-30. doi: 10.1007/s00248-014-0377-6. Epub 2014 Feb 20.

PMID:
24553913
17.

Studies of Pb2+ adsorption by Moringa oleifera Lam. seeds from an aqueous medium in a batch system.

Meneghel AP, Gonçalves AC Jr, Tarley CR, Stangarlin JR, Rubio F, Nacke H.

Water Sci Technol. 2014;69(1):163-9. doi: 10.2166/wst.2013.627.

PMID:
24434983
18.

Interannual variation in land-use intensity enhances grassland multidiversity.

Allan E, Bossdorf O, Dormann CF, Prati D, Gossner MM, Tscharntke T, Blüthgen N, Bellach M, Birkhofer K, Boch S, Böhm S, Börschig C, Chatzinotas A, Christ S, Daniel R, Diekötter T, Fischer C, Friedl T, Glaser K, Hallmann C, Hodac L, Hölzel N, Jung K, Klein AM, Klaus VH, Kleinebecker T, Krauss J, Lange M, Morris EK, Müller J, Nacke H, Pasalic E, Rillig MC, Rothenwöhrer C, Schall P, Scherber C, Schulze W, Socher SA, Steckel J, Steffan-Dewenter I, Türke M, Weiner CN, Werner M, Westphal C, Wolters V, Wubet T, Gockel S, Gorke M, Hemp A, Renner SC, Schöning I, Pfeiffer S, König-Ries B, Buscot F, Linsenmair KE, Schulze ED, Weisser WW, Fischer M.

Proc Natl Acad Sci U S A. 2014 Jan 7;111(1):308-13. doi: 10.1073/pnas.1312213111. Epub 2013 Dec 24.

19.

High abundance of heterotrophic prokaryotes in hydrothermal springs of the Azores as revealed by a network of 16S rRNA gene-based methods.

Sahm K, John P, Nacke H, Wemheuer B, Grote R, Daniel R, Antranikian G.

Extremophiles. 2013 Jul;17(4):649-62. doi: 10.1007/s00792-013-0548-2. Epub 2013 May 26.

PMID:
23708551
20.

Availability of heavy metals (Cd, Pb, And Cr) in agriculture from commercial fertilizers.

Nacke H, Gonçalves AC Jr, Schwantes D, Nava IA, Strey L, Coelho GF.

Arch Environ Contam Toxicol. 2013 May;64(4):537-44. doi: 10.1007/s00244-012-9867-z. Epub 2013 Jan 30.

PMID:
23361451
21.

General relationships between abiotic soil properties and soil biota across spatial scales and different land-use types.

Birkhofer K, Schöning I, Alt F, Herold N, Klarner B, Maraun M, Marhan S, Oelmann Y, Wubet T, Yurkov A, Begerow D, Berner D, Buscot F, Daniel R, Diekötter T, Ehnes RB, Erdmann G, Fischer C, Foesel B, Groh J, Gutknecht J, Kandeler E, Lang C, Lohaus G, Meyer A, Nacke H, Näther A, Overmann J, Polle A, Pollierer MM, Scheu S, Schloter M, Schulze ED, Schulze W, Weinert J, Weisser WW, Wolters V, Schrumpf M.

PLoS One. 2012;7(8):e43292. doi: 10.1371/journal.pone.0043292. Epub 2012 Aug 22.

22.

Assessing group differences in biodiversity by simultaneously testing a user-defined selection of diversity indices.

Pallmann P, Schaarschmidt F, Hothorn LA, Fischer C, Nacke H, Priesnitz KU, Schork NJ.

Mol Ecol Resour. 2012 Nov;12(6):1068-78. doi: 10.1111/1755-0998.12004. Epub 2012 Aug 30.

23.

Identification and characterization of novel cellulolytic and hemicellulolytic genes and enzymes derived from German grassland soil metagenomes.

Nacke H, Engelhaupt M, Brady S, Fischer C, Tautzt J, Daniel R.

Biotechnol Lett. 2012 Apr;34(4):663-75. doi: 10.1007/s10529-011-0830-2. Epub 2011 Dec 21.

24.

Identification of novel lipolytic genes and gene families by screening of metagenomic libraries derived from soil samples of the German Biodiversity Exploratories.

Nacke H, Will C, Herzog S, Nowka B, Engelhaupt M, Daniel R.

FEMS Microbiol Ecol. 2011 Oct;78(1):188-201. doi: 10.1111/j.1574-6941.2011.01088.x. Epub 2011 Apr 6.

25.

Pyrosequencing-based assessment of bacterial community structure along different management types in German forest and grassland soils.

Nacke H, Thürmer A, Wollherr A, Will C, Hodac L, Herold N, Schöning I, Schrumpf M, Daniel R.

PLoS One. 2011 Feb 16;6(2):e17000. doi: 10.1371/journal.pone.0017000.

26.

Horizon-specific bacterial community composition of German grassland soils, as revealed by pyrosequencing-based analysis of 16S rRNA genes.

Will C, Thürmer A, Wollherr A, Nacke H, Herold N, Schrumpf M, Gutknecht J, Wubet T, Buscot F, Daniel R.

Appl Environ Microbiol. 2010 Oct;76(20):6751-9. doi: 10.1128/AEM.01063-10. Epub 2010 Aug 20.

27.

[A device for studying respiratory mechanics by the forced oscillation technique].

D'iachenko AI, Nacke HG.

Med Tekh. 1993 Mar-Apr;(2):27-30. Russian.

PMID:
8502151

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