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Items: 1 to 50 of 106

1.

Transmission modes of the mammalian gut microbiota.

Moeller AH, Suzuki TA, Phifer-Rixey M, Nachman MW.

Science. 2018 Oct 26;362(6413):453-457. doi: 10.1126/science.aat7164.

PMID:
30361372
2.

Altitudinal variation of the gut microbiota in wild house mice.

Suzuki TA, Martins FM, Nachman MW.

Mol Ecol. 2018 Oct 22. doi: 10.1111/mec.14905. [Epub ahead of print]

PMID:
30346069
3.

The genomic basis of environmental adaptation in house mice.

Phifer-Rixey M, Bi K, Ferris KG, Sheehan MJ, Lin D, Mack KL, Keeble SM, Suzuki TA, Good JM, Nachman MW.

PLoS Genet. 2018 Sep 24;14(9):e1007672. doi: 10.1371/journal.pgen.1007672. eCollection 2018 Sep.

4.

Gene regulation underlies environmental adaptation in house mice.

Mack KL, Ballinger MA, Phifer-Rixey M, Nachman MW.

Genome Res. 2018 Nov;28(11):1636-1645. doi: 10.1101/gr.238998.118. Epub 2018 Sep 7.

PMID:
30194096
5.

Chitinase genes (CHIAs) provide genomic footprints of a post-Cretaceous dietary radiation in placental mammals.

Emerling CA, Delsuc F, Nachman MW.

Sci Adv. 2018 May 16;4(5):eaar6478. doi: 10.1126/sciadv.aar6478. eCollection 2018 May.

6.

Genomic islands of differentiation in two songbird species reveal candidate genes for hybrid female sterility.

Mořkovský L, Janoušek V, Reif J, Rídl J, Pačes J, Choleva L, Janko K, Nachman MW, Reifová R.

Mol Ecol. 2018 Feb;27(4):949-958. doi: 10.1111/mec.14479. Epub 2018 Feb 26.

PMID:
29319911
7.

Dispersal limitation promotes the diversification of the mammalian gut microbiota.

Moeller AH, Suzuki TA, Lin D, Lacey EA, Wasser SK, Nachman MW.

Proc Natl Acad Sci U S A. 2017 Dec 26;114(52):13768-13773. doi: 10.1073/pnas.1700122114. Epub 2017 Dec 11.

8.

Gene Regulation and Speciation.

Mack KL, Nachman MW.

Trends Genet. 2017 Jan;33(1):68-80. doi: 10.1016/j.tig.2016.11.003. Epub 2016 Dec 1. Review.

9.

Spatial Heterogeneity of Gut Microbial Composition along the Gastrointestinal Tract in Natural Populations of House Mice.

Suzuki TA, Nachman MW.

PLoS One. 2016 Sep 26;11(9):e0163720. doi: 10.1371/journal.pone.0163720. eCollection 2016.

10.

Isolation and characterization of Neisseria musculi sp. nov., from the wild house mouse.

Weyand NJ, Ma M, Phifer-Rixey M, Taku NA, Rendón MA, Hockenberry AM, Kim WJ, Agellon AB, Biais N, Suzuki TA, Goodyer-Sait L, Harrison OB, Bratcher HB, Nachman MW, Maiden MC, So M.

Int J Syst Evol Microbiol. 2016 Sep;66(9):3585-3593. doi: 10.1099/ijsem.0.001237. Epub 2016 Jun 13.

11.

Selection on Coding and Regulatory Variation Maintains Individuality in Major Urinary Protein Scent Marks in Wild Mice.

Sheehan MJ, Lee V, Corbett-Detig R, Bi K, Beynon RJ, Hurst JL, Nachman MW.

PLoS Genet. 2016 Mar 3;12(3):e1005891. doi: 10.1371/journal.pgen.1005891. eCollection 2016 Mar.

12.

Gene regulation and speciation in house mice.

Mack KL, Campbell P, Nachman MW.

Genome Res. 2016 Apr;26(4):451-61. doi: 10.1101/gr.195743.115. Epub 2016 Feb 1.

13.

Natural history collections as windows on evolutionary processes.

Holmes MW, Hammond TT, Wogan GO, Walsh RE, LaBarbera K, Wommack EA, Martins FM, Crawford JC, Mack KL, Bloch LM, Nachman MW.

Mol Ecol. 2016 Feb;25(4):864-81. doi: 10.1111/mec.13529. Review.

14.

Speciation and reduced hybrid female fertility in house mice.

Suzuki TA, Nachman MW.

Evolution. 2015 Sep;69(9):2468-81. doi: 10.1111/evo.12747. Epub 2015 Sep 8.

15.

Insights into mammalian biology from the wild house mouse Mus musculus.

Phifer-Rixey M, Nachman MW.

Elife. 2015 Apr 15;4. doi: 10.7554/eLife.05959.

16.

Morphological and population genomic evidence that human faces have evolved to signal individual identity.

Sheehan MJ, Nachman MW.

Nat Commun. 2014 Sep 16;5:4800. doi: 10.1038/ncomms5800.

17.

The genomic architecture of population divergence between subspecies of the European rabbit.

Carneiro M, Albert FW, Afonso S, Pereira RJ, Burbano H, Campos R, Melo-Ferreira J, Blanco-Aguiar JA, Villafuerte R, Nachman MW, Good JM, Ferrand N.

PLoS Genet. 2014 Aug 28;10(8):e1003519. doi: 10.1371/journal.pgen.1003519. eCollection 2014 Aug.

18.

Genome-wide patterns of differentiation among house mouse subspecies.

Phifer-Rixey M, Bomhoff M, Nachman MW.

Genetics. 2014 Sep;198(1):283-97. doi: 10.1534/genetics.114.166827. Epub 2014 Jul 3.

19.

Specimen collection: an essential tool.

Rocha LA, Aleixo A, Allen G, Almeda F, Baldwin CC, Barclay MV, Bates JM, Bauer AM, Benzoni F, Berns CM, Berumen ML, Blackburn DC, Blum S, Bolaños F, Bowie RC, Britz R, Brown RM, Cadena CD, Carpenter K, Ceríaco LM, Chakrabarty P, Chaves G, Choat JH, Clements KD, Collette BB, Collins A, Coyne J, Cracraft J, Daniel T, de Carvalho MR, de Queiroz K, Di Dario F, Drewes R, Dumbacher JP, Engilis A Jr, Erdmann MV, Eschmeyer W, Feldman CR, Fisher BL, Fjeldså J, Fritsch PW, Fuchs J, Getahun A, Gill A, Gomon M, Gosliner T, Graves GR, Griswold CE, Guralnick R, Hartel K, Helgen KM, Ho H, Iskandar DT, Iwamoto T, Jaafar Z, James HF, Johnson D, Kavanaugh D, Knowlton N, Lacey E, Larson HK, Last P, Leis JM, Lessios H, Liebherr J, Lowman M, Mahler DL, Mamonekene V, Matsuura K, Mayer GC, Mays H Jr, McCosker J, McDiarmid RW, McGuire J, Miller MJ, Mooi R, Mooi RD, Moritz C, Myers P, Nachman MW, Nussbaum RA, Foighil DÓ, Parenti LR, Parham JF, Paul E, Paulay G, Pérez-Emán J, Pérez-Matus A, Poe S, Pogonoski J, Rabosky DL, Randall JE, Reimer JD, Robertson DR, Rödel MO, Rodrigues MT, Roopnarine P, Rüber L, Ryan MJ, Sheldon F, Shinohara G, Short A, Simison WB, Smith-Vaniz WF, Springer VG, Stiassny M, Tello JG, Thompson CW, Trnski T, Tucker P, Valqui T, Vecchione M, Verheyen E, Wainwright PC, Wheeler TA, White WT, Will K, Williams JT, Williams G, Wilson EO, Winker K, Winterbottom R, Witt CC.

Science. 2014 May 23;344(6186):814-5. doi: 10.1126/science.344.6186.814. No abstract available.

PMID:
24855245
20.

Sexual selection on protamine and transition nuclear protein expression in mouse species.

Lüke L, Campbell P, Varea Sánchez M, Nachman MW, Roldan ER.

Proc Biol Sci. 2014 Mar 26;281(1783):20133359. doi: 10.1098/rspb.2013.3359. Print 2014 May 22.

21.

Genomics and the origin of species.

Seehausen O, Butlin RK, Keller I, Wagner CE, Boughman JW, Hohenlohe PA, Peichel CL, Saetre GP, Bank C, Brännström A, Brelsford A, Clarkson CS, Eroukhmanoff F, Feder JL, Fischer MC, Foote AD, Franchini P, Jiggins CD, Jones FC, Lindholm AK, Lucek K, Maan ME, Marques DA, Martin SH, Matthews B, Meier JI, Möst M, Nachman MW, Nonaka E, Rennison DJ, Schwarzer J, Watson ET, Westram AM, Widmer A.

Nat Rev Genet. 2014 Mar;15(3):176-92. doi: 10.1038/nrg3644. Review.

22.

X-y interactions underlie sperm head abnormality in hybrid male house mice.

Campbell P, Nachman MW.

Genetics. 2014 Apr;196(4):1231-40. doi: 10.1534/genetics.114.161703. Epub 2014 Feb 5.

23.

Genomics and museum specimens.

Nachman MW.

Mol Ecol. 2013 Dec;22(24):5966-8. doi: 10.1111/mec.12563.

PMID:
24138088
24.

Steep clines within a highly permeable genome across a hybrid zone between two subspecies of the European rabbit.

Carneiro M, Baird SJ, Afonso S, Ramirez E, Tarroso P, Teotónio H, Villafuerte R, Nachman MW, Ferrand N.

Mol Ecol. 2013 May;22(9):2511-25. doi: 10.1111/mec.12272. Epub 2013 Mar 26.

25.

Meiotic sex chromosome inactivation is disrupted in sterile hybrid male house mice.

Campbell P, Good JM, Nachman MW.

Genetics. 2013 Mar;193(3):819-28. doi: 10.1534/genetics.112.148635. Epub 2013 Jan 10.

26.

The contribution of the Y chromosome to hybrid male sterility in house mice.

Campbell P, Good JM, Dean MD, Tucker PK, Nachman MW.

Genetics. 2012 Aug;191(4):1271-81. doi: 10.1534/genetics.112.141804. Epub 2012 May 17.

27.

Genome-wide architecture of reproductive isolation in a naturally occurring hybrid zone between Mus musculus musculus and M. m. domesticus.

Janoušek V, Wang L, Luzynski K, Dufková P, Vyskočilová MM, Nachman MW, Munclinger P, Macholán M, Piálek J, Tucker PK.

Mol Ecol. 2012 Jun;21(12):3032-47. doi: 10.1111/j.1365-294X.2012.05583.x. Epub 2012 May 14.

28.

Adaptive evolution and effective population size in wild house mice.

Phifer-Rixey M, Bonhomme F, Boursot P, Churchill GA, Piálek J, Tucker PK, Nachman MW.

Mol Biol Evol. 2012 Oct;29(10):2949-55. Epub 2012 Apr 3.

29.

Evidence for widespread positive and purifying selection across the European rabbit (Oryctolagus cuniculus) genome.

Carneiro M, Albert FW, Melo-Ferreira J, Galtier N, Gayral P, Blanco-Aguiar JA, Villafuerte R, Nachman MW, Ferrand N.

Mol Biol Evol. 2012 Jul;29(7):1837-49. doi: 10.1093/molbev/mss025. Epub 2012 Jan 31.

30.

Recombination rate variation and speciation: theoretical predictions and empirical results from rabbits and mice.

Nachman MW, Payseur BA.

Philos Trans R Soc Lond B Biol Sci. 2012 Feb 5;367(1587):409-21. doi: 10.1098/rstb.2011.0249. Review.

31.

Higher differentiation among subspecies of the house mouse (Mus musculus) in genomic regions with low recombination.

Geraldes A, Basset P, Smith KL, Nachman MW.

Mol Ecol. 2011 Nov;20(22):4722-36. doi: 10.1111/j.1365-294X.2011.05285.x. Epub 2011 Oct 18.

32.

Adaptive introgression of anticoagulant rodent poison resistance by hybridization between old world mice.

Song Y, Endepols S, Klemann N, Richter D, Matuschka FR, Shih CH, Nachman MW, Kohn MH.

Curr Biol. 2011 Aug 9;21(15):1296-301. doi: 10.1016/j.cub.2011.06.043. Epub 2011 Jul 21.

33.

Measures of linkage disequilibrium among neighbouring SNPs indicate asymmetries across the house mouse hybrid zone.

Wang L, Luzynski K, Pool JE, Janoušek V, Dufková P, Vyskočilová MM, Teeter KC, Nachman MW, Munclinger P, Macholán M, Piálek J, Tucker PK.

Mol Ecol. 2011 Jul;20(14):2985-3000. doi: 10.1111/j.1365-294X.2011.05148.x. Epub 2011 Jun 11.

PMID:
21668551
34.

Identification of ejaculated proteins in the house mouse (Mus domesticus) via isotopic labeling.

Dean MD, Findlay GD, Hoopmann MR, Wu CC, MacCoss MJ, Swanson WJ, Nachman MW.

BMC Genomics. 2011 Jun 10;12:306. doi: 10.1186/1471-2164-12-306.

35.

Subspecific origin and haplotype diversity in the laboratory mouse.

Yang H, Wang JR, Didion JP, Buus RJ, Bell TA, Welsh CE, Bonhomme F, Yu AH, Nachman MW, Pialek J, Tucker P, Boursot P, McMillan L, Churchill GA, de Villena FP.

Nat Genet. 2011 May 29;43(7):648-55. doi: 10.1038/ng.847.

36.

Ecological character displacement in the face of gene flow: evidence from two species of nightingales.

Reifová R, Reif J, Antczak M, Nachman MW.

BMC Evol Biol. 2011 May 24;11:138. doi: 10.1186/1471-2148-11-138.

37.

The genetic structure of domestic rabbits.

Carneiro M, Afonso S, Geraldes A, Garreau H, Bolet G, Boucher S, Tircazes A, Queney G, Nachman MW, Ferrand N.

Mol Biol Evol. 2011 Jun;28(6):1801-16. doi: 10.1093/molbev/msr003. Epub 2011 Jan 7.

38.

Extraordinary sequence divergence at Tsga8, an X-linked gene involved in mouse spermiogenesis.

Good JM, Vanderpool D, Smith KL, Nachman MW.

Mol Biol Evol. 2011 May;28(5):1675-86. doi: 10.1093/molbev/msq348. Epub 2010 Dec 24.

39.

Widespread over-expression of the X chromosome in sterile F₁hybrid mice.

Good JM, Giger T, Dean MD, Nachman MW.

PLoS Genet. 2010 Sep 30;6(9):e1001148. doi: 10.1371/journal.pgen.1001148.

40.

Speciation in the European rabbit (Oryctolagus cuniculus): islands of differentiation on the X chromosome and autosomes.

Carneiro M, Blanco-Aguiar JA, Villafuerte R, Ferrand N, Nachman MW.

Evolution. 2010 Dec;64(12):3443-60. doi: 10.1111/j.1558-5646.2010.01092.x.

41.

Extensive gene conversion drives the concerted evolution of paralogous copies of the SRY gene in European rabbits.

Geraldes A, Rambo T, Wing RA, Ferrand N, Nachman MW.

Mol Biol Evol. 2010 Nov;27(11):2437-40. doi: 10.1093/molbev/msq139. Epub 2010 Jun 4.

42.

Adaptation and constraint at Toll-like receptors in primates.

Wlasiuk G, Nachman MW.

Mol Biol Evol. 2010 Sep;27(9):2172-86. doi: 10.1093/molbev/msq104. Epub 2010 Apr 21.

43.

Promiscuity and the rate of molecular evolution at primate immunity genes.

Wlasiuk G, Nachman MW.

Evolution. 2010 Aug;64(8):2204-20. doi: 10.1111/j.1558-5646.2010.00989.x. Epub 2010 Mar 8.

44.

The variable genomic architecture of isolation between hybridizing species of house mice.

Teeter KC, Thibodeau LM, Gompert Z, Buerkle CA, Nachman MW, Tucker PK.

Evolution. 2010 Feb 1;64(2):472-85. doi: 10.1111/j.1558-5646.2009.00846.x. Epub 2009 Sep 30.

45.

Female heterogamety and speciation: reduced introgression of the Z chromosome between two species of nightingales.

Storchová R, Reif J, Nachman MW.

Evolution. 2010 Feb 1;64(2):456-71. doi: 10.1111/j.1558-5646.2009.00841.x. Epub 2009 Sep 30.

46.

Proteomics and comparative genomic investigations reveal heterogeneity in evolutionary rate of male reproductive proteins in mice (Mus domesticus).

Dean MD, Clark NL, Findlay GD, Karn RC, Yi X, Swanson WJ, MacCoss MJ, Nachman MW.

Mol Biol Evol. 2009 Aug;26(8):1733-43. doi: 10.1093/molbev/msp094. Epub 2009 May 6.

47.

A history of recurrent positive selection at the toll-like receptor 5 in primates.

Wlasiuk G, Khan S, Switzer WM, Nachman MW.

Mol Biol Evol. 2009 Apr;26(4):937-49. doi: 10.1093/molbev/msp018. Epub 2009 Jan 29.

48.

Inferring the history of speciation in house mice from autosomal, X-linked, Y-linked and mitochondrial genes.

Geraldes A, Basset P, Gibson B, Smith KL, Harr B, Yu HT, Bulatova N, Ziv Y, Nachman MW.

Mol Ecol. 2008 Dec;17(24):5349-63. doi: 10.1111/j.1365-294X.2008.04005.x.

49.

Recombination and speciation: loci near centromeres are more differentiated than loci near telomeres between subspecies of the European rabbit (Oryctolagus cuniculus).

Carneiro M, Ferrand N, Nachman MW.

Genetics. 2009 Feb;181(2):593-606. doi: 10.1534/genetics.108.096826. Epub 2008 Nov 17.

50.

Reduced introgression of the Y chromosome between subspecies of the European rabbit (Oryctolagus cuniculus) in the Iberian Peninsula.

Geraldes A, Carneiro M, Delibes-Mateos M, Villafuerte R, Nachman MW, Ferrand N.

Mol Ecol. 2008 Oct;17(20):4489-99. doi: 10.1111/j.1365-294X.2008.03943.x.

PMID:
18986495

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