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Items: 1 to 50 of 124

1.

Development of a Model Protein Interaction Pair as a Benchmarking Tool for the Quantitative Analysis of 2-Site Protein-Protein Interactions.

Yamniuk AP, Newitt JA, Doyle ML, Arisaka F, Giannetti AM, Hensley P, Myszka DG, Schwarz FP, Thomson JA, Eisenstein E.

J Biomol Tech. 2015 Dec;26(4):125-41. doi: 10.7171/jbt.15-2604-001. Epub 2015 Oct 29.

2.

Structural and functional analysis of betaine aldehyde dehydrogenase from Staphylococcus aureus.

Halavaty AS, Rich RL, Chen C, Joo JC, Minasov G, Dubrovska I, Winsor JR, Myszka DG, Duban M, Shuvalova L, Yakunin AF, Anderson WF.

Acta Crystallogr D Biol Crystallogr. 2015 May;71(Pt 5):1159-75. doi: 10.1107/S1399004715004228. Epub 2015 Apr 25.

3.

A bacteriophage capsid protein provides a general amyloid interaction motif (GAIM) that binds and remodels misfolded protein assemblies.

Krishnan R, Tsubery H, Proschitsky MY, Asp E, Lulu M, Gilead S, Gartner M, Waltho JP, Davis PJ, Hounslow AM, Kirschner DA, Inouye H, Myszka DG, Wright J, Solomon B, Fisher RA.

J Mol Biol. 2014 Jun 26;426(13):2500-19. doi: 10.1016/j.jmb.2014.04.015. Epub 2014 Apr 22.

PMID:
24768993
4.

Biophysical fragment screening of the β1-adrenergic receptor: identification of high affinity arylpiperazine leads using structure-based drug design.

Christopher JA, Brown J, Doré AS, Errey JC, Koglin M, Marshall FH, Myszka DG, Rich RL, Tate CG, Tehan B, Warne T, Congreve M.

J Med Chem. 2013 May 9;56(9):3446-55. doi: 10.1021/jm400140q. Epub 2013 Apr 9.

5.

CCR5 is a receptor for Staphylococcus aureus leukotoxin ED.

Alonzo F 3rd, Kozhaya L, Rawlings SA, Reyes-Robles T, DuMont AL, Myszka DG, Landau NR, Unutmaz D, Torres VJ.

Nature. 2013 Jan 3;493(7430):51-5. doi: 10.1038/nature11724. Epub 2012 Dec 12.

6.

Interactions of the human LIP5 regulatory protein with endosomal sorting complexes required for transport.

Skalicky JJ, Arii J, Wenzel DM, Stubblefield WM, Katsuyama A, Uter NT, Bajorek M, Myszka DG, Sundquist WI.

J Biol Chem. 2012 Dec 21;287(52):43910-26. doi: 10.1074/jbc.M112.417899. Epub 2012 Oct 26.

7.

Structure of a proteasome Pba1-Pba2 complex: implications for proteasome assembly, activation, and biological function.

Stadtmueller BM, Kish-Trier E, Ferrell K, Petersen CN, Robinson H, Myszka DG, Eckert DM, Formosa T, Hill CP.

J Biol Chem. 2012 Oct 26;287(44):37371-82. doi: 10.1074/jbc.M112.367003. Epub 2012 Aug 28.

8.

Survey of the 2009 commercial optical biosensor literature.

Rich RL, Myszka DG.

J Mol Recognit. 2011 Nov-Dec;24(6):892-914. doi: 10.1002/jmr.1138.

PMID:
22038797
9.

Fragment screening of stabilized G-protein-coupled receptors using biophysical methods.

Congreve M, Rich RL, Myszka DG, Figaroa F, Siegal G, Marshall FH.

Methods Enzymol. 2011;493:115-36. doi: 10.1016/B978-0-12-381274-2.00005-4.

PMID:
21371589
10.

Biacore analysis with stabilized G-protein-coupled receptors.

Rich RL, Errey J, Marshall F, Myszka DG.

Anal Biochem. 2011 Feb 15;409(2):267-72. doi: 10.1016/j.ab.2010.10.008. Epub 2010 Oct 20.

11.

Two independent histidines, one in human prolactin and one in its receptor, are critical for pH-dependent receptor recognition and activation.

Kulkarni MV, Tettamanzi MC, Murphy JW, Keeler C, Myszka DG, Chayen NE, Lolis EJ, Hodsdon ME.

J Biol Chem. 2010 Dec 3;285(49):38524-33. doi: 10.1074/jbc.M110.172072. Epub 2010 Sep 30.

12.

Biosensor-based fragment screening using FastStep injections.

Rich RL, Quinn JG, Morton T, Stepp JD, Myszka DG.

Anal Biochem. 2010 Dec 15;407(2):270-7. doi: 10.1016/j.ab.2010.08.024. Epub 2010 Aug 25.

13.

Kinetic analysis and fragment screening with Fujifilm AP-3000.

Rich RL, Myszka DG.

Anal Biochem. 2010 Jul 15;402(2):170-8. doi: 10.1016/j.ab.2010.03.043. Epub 2010 Apr 3.

PMID:
20371220
14.

Grading the commercial optical biosensor literature-Class of 2008: 'The Mighty Binders'.

Rich RL, Myszka DG.

J Mol Recognit. 2010 Jan-Feb;23(1):1-64. doi: 10.1002/jmr.1004. Review.

PMID:
20017116
15.

Multivalent benzoboroxole functionalized polymers as gp120 glycan targeted microbicide entry inhibitors.

Jay JI, Lai BE, Myszka DG, Mahalingam A, Langheinrich K, Katz DF, Kiser PF.

Mol Pharm. 2010 Feb 1;7(1):116-29. doi: 10.1021/mp900159n.

16.

Structural models for interactions between the 20S proteasome and its PAN/19S activators.

Stadtmueller BM, Ferrell K, Whitby FG, Heroux A, Robinson H, Myszka DG, Hill CP.

J Biol Chem. 2010 Jan 1;285(1):13-7. doi: 10.1074/jbc.C109.070425. Epub 2009 Nov 4.

17.

Structural basis for ESCRT-III protein autoinhibition.

Bajorek M, Schubert HL, McCullough J, Langelier C, Eckert DM, Stubblefield WM, Uter NT, Myszka DG, Hill CP, Sundquist WI.

Nat Struct Mol Biol. 2009 Jul;16(7):754-62. doi: 10.1038/nsmb.1621. Epub 2009 Jun 14.

18.

E2 interaction and dimerization in the crystal structure of TRAF6.

Yin Q, Lin SC, Lamothe B, Lu M, Lo YC, Hura G, Zheng L, Rich RL, Campos AD, Myszka DG, Lenardo MJ, Darnay BG, Wu H.

Nat Struct Mol Biol. 2009 Jun;16(6):658-66. doi: 10.1038/nsmb.1605. Epub 2009 May 24.

19.

Inhibition and binding kinetics of the hepatitis C virus NS3 protease inhibitor ITMN-191 reveals tight binding and slow dissociative behavior.

Rajagopalan R, Misialek S, Stevens SK, Myszka DG, Brandhuber BJ, Ballard JA, Andrews SW, Seiwert SD, Kossen K.

Biochemistry. 2009 Mar 24;48(11):2559-68. doi: 10.1021/bi900038p.

PMID:
19209850
20.

Detergent screening of a G-protein-coupled receptor using serial and array biosensor technologies.

Rich RL, Miles AR, Gale BK, Myszka DG.

Anal Biochem. 2009 Mar 1;386(1):98-104. doi: 10.1016/j.ab.2008.12.011. Epub 2008 Dec 24.

21.

A global benchmark study using affinity-based biosensors.

Rich RL, Papalia GA, Flynn PJ, Furneisen J, Quinn J, Klein JS, Katsamba PS, Waddell MB, Scott M, Thompson J, Berlier J, Corry S, Baltzinger M, Zeder-Lutz G, Schoenemann A, Clabbers A, Wieckowski S, Murphy MM, Page P, Ryan TE, Duffner J, Ganguly T, Corbin J, Gautam S, Anderluh G, Bavdek A, Reichmann D, Yadav SP, Hommema E, Pol E, Drake A, Klakamp S, Chapman T, Kernaghan D, Miller K, Schuman J, Lindquist K, Herlihy K, Murphy MB, Bohnsack R, Andrien B, Brandani P, Terwey D, Millican R, Darling RJ, Wang L, Carter Q, Dotzlaf J, Lopez-Sagaseta J, Campbell I, Torreri P, Hoos S, England P, Liu Y, Abdiche Y, Malashock D, Pinkerton A, Wong M, Lafer E, Hinck C, Thompson K, Primo CD, Joyce A, Brooks J, Torta F, Bagge Hagel AB, Krarup J, Pass J, Ferreira M, Shikov S, Mikolajczyk M, Abe Y, Barbato G, Giannetti AM, Krishnamoorthy G, Beusink B, Satpaev D, Tsang T, Fang E, Partridge J, Brohawn S, Horn J, Pritsch O, Obal G, Nilapwar S, Busby B, Gutierrez-Sanchez G, Gupta RD, Canepa S, Witte K, Nikolovska-Coleska Z, Cho YH, D'Agata R, Schlick K, Calvert R, Munoz EM, Hernaiz MJ, Bravman T, Dines M, Yang MH, Puskas A, Boni E, Li J, Wear M, Grinberg A, Baardsnes J, Dolezal O, Gainey M, Anderson H, Peng J, Lewis M, Spies P, Trinh Q, Bibikov S, Raymond J, Yousef M, Chandrasekaran V, Feng Y, Emerick A, Mundodo S, Guimaraes R, McGirr K, Li YJ, Hughes H, Mantz H, Skrabana R, Witmer M, Ballard J, Martin L, Skladal P, Korza G, Laird-Offringa I, Lee CS, Khadir A, Podlaski F, Neuner P, Rothacker J, Rafique A, Dankbar N, Kainz P, Gedig E, Vuyisich M, Boozer C, Ly N, Toews M, Uren A, Kalyuzhniy O, Lewis K, Chomey E, Pak BJ, Myszka DG.

Anal Biochem. 2009 Mar 15;386(2):194-216. doi: 10.1016/j.ab.2008.11.021. Epub 2008 Nov 27.

22.

"Spot and hop": internal referencing for surface plasmon resonance imaging using a three-dimensional microfluidic flow cell array.

Eddings MA, Eckman JW, Arana CA, Papalia GA, Connolly JE, Gale BK, Myszka DG.

Anal Biochem. 2009 Feb 15;385(2):309-13. doi: 10.1016/j.ab.2008.11.014. Epub 2008 Nov 20.

23.

Survey of the year 2007 commercial optical biosensor literature.

Rich RL, Myszka DG.

J Mol Recognit. 2008 Nov-Dec;21(6):355-400. doi: 10.1002/jmr.928. Review.

PMID:
18951413
24.

Optimal conditions for protein array deposition using continuous flow.

Natarajan S, Hatch A, Myszka DG, Gale BK.

Anal Chem. 2008 Nov 15;80(22):8561-7. doi: 10.1021/ac8014609. Epub 2008 Oct 22.

PMID:
18939855
25.

Thermodynamic characterization of pyrazole and azaindole derivatives binding to p38 mitogen-activated protein kinase using Biacore T100 technology and van't Hoff analysis.

Papalia GA, Giannetti AM, Arora N, Myszka DG.

Anal Biochem. 2008 Dec 15;383(2):255-64. doi: 10.1016/j.ab.2008.08.010. Epub 2008 Aug 19.

PMID:
18774767
26.

Improved continuous-flow print head for micro-array deposition.

Eddings MA, Miles AR, Eckman JW, Kim J, Rich RL, Gale BK, Myszka DG.

Anal Biochem. 2008 Nov 1;382(1):55-9. doi: 10.1016/j.ab.2008.07.031. Epub 2008 Aug 3.

PMID:
18703010
27.

High-affinity interaction between IKKbeta and NEMO.

Lo YC, Maddineni U, Chung JY, Rich RL, Myszka DG, Wu H.

Biochemistry. 2008 Mar 11;47(10):3109-16. doi: 10.1021/bi702312c. Epub 2008 Feb 12.

28.

Survey of the year 2006 commercial optical biosensor literature.

Rich RL, Myszka DG.

J Mol Recognit. 2007 Sep-Oct;20(5):300-66.

PMID:
18074396
29.

Structural and functional studies of ALIX interactions with YPX(n)L late domains of HIV-1 and EIAV.

Zhai Q, Fisher RD, Chung HY, Myszka DG, Sundquist WI, Hill CP.

Nat Struct Mol Biol. 2008 Jan;15(1):43-9. Epub 2007 Dec 9.

PMID:
18066081
30.

Molecular basis for passive immunotherapy of Alzheimer's disease.

Gardberg AS, Dice LT, Ou S, Rich RL, Helmbrecht E, Ko J, Wetzel R, Myszka DG, Patterson PH, Dealwis C.

Proc Natl Acad Sci U S A. 2007 Oct 2;104(40):15659-64. Epub 2007 Sep 25.

31.

Extracting kinetic rate constants from surface plasmon resonance array systems.

Rich RL, Cannon MJ, Jenkins J, Pandian P, Sundaram S, Magyar R, Brockman J, Lambert J, Myszka DG.

Anal Biochem. 2008 Feb 1;373(1):112-20. Epub 2007 Aug 19.

PMID:
17889820
32.

Continuous-flow microfluidic printing of proteins for array-based applications including surface plasmon resonance imaging.

Natarajan S, Katsamba PS, Miles A, Eckman J, Papalia GA, Rich RL, Gale BK, Myszka DG.

Anal Biochem. 2008 Feb 1;373(1):141-6. Epub 2007 Aug 19.

PMID:
17868635
33.

Thermodynamic benchmark study using Biacore technology.

Navratilova I, Papalia GA, Rich RL, Bedinger D, Brophy S, Condon B, Deng T, Emerick AW, Guan HW, Hayden T, Heutmekers T, Hoorelbeke B, McCroskey MC, Murphy MM, Nakagawa T, Parmeggiani F, Qin X, Rebe S, Tomasevic N, Tsang T, Waddell MB, Zhang FF, Leavitt S, Myszka DG.

Anal Biochem. 2007 May 1;364(1):67-77. Epub 2007 Jan 26.

PMID:
17362870
34.

The kinetics of binding human prolactin, but not growth hormone, to the prolactin receptor vary over a physiologic pH range.

Keeler C, Jablonski EM, Albert YB, Taylor BD, Myszka DG, Clevenger CV, Hodsdon ME.

Biochemistry. 2007 Mar 6;46(9):2398-410. Epub 2007 Feb 6.

PMID:
17279774
35.

Higher-throughput, label-free, real-time molecular interaction analysis.

Rich RL, Myszka DG.

Anal Biochem. 2007 Feb 1;361(1):1-6. Epub 2006 Nov 13. Review. No abstract available.

PMID:
17145039
36.

Survey of the year 2005 commercial optical biosensor literature.

Rich RL, Myszka DG.

J Mol Recognit. 2006 Nov-Dec;19(6):478-534. Review.

PMID:
17125150
37.

High-resolution characterization of antibody fragment/antigen interactions using Biacore T100.

Papalia GA, Baer M, Luehrsen K, Nordin H, Flynn P, Myszka DG.

Anal Biochem. 2006 Dec 1;359(1):112-9. Epub 2006 Sep 22.

PMID:
17027901
38.

Comparative analysis of 10 small molecules binding to carbonic anhydrase II by different investigators using Biacore technology.

Papalia GA, Leavitt S, Bynum MA, Katsamba PS, Wilton R, Qiu H, Steukers M, Wang S, Bindu L, Phogat S, Giannetti AM, Ryan TE, Pudlak VA, Matusiewicz K, Michelson KM, Nowakowski A, Pham-Baginski A, Brooks J, Tieman BC, Bruce BD, Vaughn M, Baksh M, Cho YH, Wit MD, Smets A, Vandersmissen J, Michiels L, Myszka DG.

Anal Biochem. 2006 Dec 1;359(1):94-105. Epub 2006 Sep 7.

PMID:
17007806
39.

Exploring "one-shot" kinetics and small molecule analysis using the ProteOn XPR36 array biosensor.

Bravman T, Bronner V, Lavie K, Notcovich A, Papalia GA, Myszka DG.

Anal Biochem. 2006 Nov 15;358(2):281-8. Epub 2006 Aug 18.

PMID:
16962556
40.

A theoretical and experimental study of competition between solution and surface receptors for ligand in a Biacore flow cell.

He X, Coombs D, Myszka DG, Goldstein B.

Bull Math Biol. 2006 Jul;68(5):1125-50. Epub 2006 Jun 28.

PMID:
16804651
41.

Analyzing ligand and small molecule binding activity of solubilized GPCRs using biosensor technology.

Navratilova I, Dioszegi M, Myszka DG.

Anal Biochem. 2006 Aug 1;355(1):132-9. Epub 2006 May 15.

PMID:
16762304
42.

A biosensor-based approach toward purification and crystallization of G protein-coupled receptors.

Navratilova I, Pancera M, Wyatt RT, Myszka DG.

Anal Biochem. 2006 Jun 15;353(2):278-83. Epub 2006 Apr 18.

PMID:
16647033
43.

Kinetic analysis of a high-affinity antibody/antigen interaction performed by multiple Biacore users.

Katsamba PS, Navratilova I, Calderon-Cacia M, Fan L, Thornton K, Zhu M, Bos TV, Forte C, Friend D, Laird-Offringa I, Tavares G, Whatley J, Shi E, Widom A, Lindquist KC, Klakamp S, Drake A, Bohmann D, Roell M, Rose L, Dorocke J, Roth B, Luginbühl B, Myszka DG.

Anal Biochem. 2006 May 15;352(2):208-21. Epub 2006 Feb 23.

PMID:
16564019
44.

Screening antibody-antigen interactions in parallel using Biacore A100.

Säfsten P, Klakamp SL, Drake AW, Karlsson R, Myszka DG.

Anal Biochem. 2006 Jun 15;353(2):181-90. Epub 2006 Feb 14.

PMID:
16510107
45.

Analyzing a kinetic titration series using affinity biosensors.

Karlsson R, Katsamba PS, Nordin H, Pol E, Myszka DG.

Anal Biochem. 2006 Feb 1;349(1):136-47. Epub 2005 Oct 13.

PMID:
16337141
46.

Phosphoinositide-containing polymerized liposomes: stable membrane-mimetic vesicles for protein-lipid binding analysis.

Ferguson CG, James RD, Bigman CS, Shepard DA, Abdiche Y, Katsamba PS, Myszka DG, Prestwich GD.

Bioconjug Chem. 2005 Nov-Dec;16(6):1475-83.

PMID:
16287244
47.

Survey of the year 2004 commercial optical biosensor literature.

Rich RL, Myszka DG.

J Mol Recognit. 2005 Nov-Dec;18(6):431-78. Review.

PMID:
16252250
48.

Eosinophil-granule major basic protein, a C-type lectin, binds heparin.

Swaminathan GJ, Myszka DG, Katsamba PS, Ohnuki LE, Gleich GJ, Acharya KR.

Biochemistry. 2005 Nov 1;44(43):14152-8.

PMID:
16245931
49.

Measuring long association phases using Biacore.

Navratilova I, Eisenstien E, Myszka DG.

Anal Biochem. 2005 Sep 15;344(2):295-7. No abstract available.

PMID:
16043110
50.

The interaction between tBid and cardiolipin or monolysocardiolipin.

Liu J, Durrant D, Yang HS, He Y, Whitby FG, Myszka DG, Lee RM.

Biochem Biophys Res Commun. 2005 May 13;330(3):865-70.

PMID:
15809076

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