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Items: 17

1.

Single and double box HMGB proteins differentially destabilize nucleosomes.

McCauley MJ, Huo R, Becker N, Holte MN, Muthurajan UM, Rouzina I, Luger K, Maher LJ 3rd, Israeloff NE, Williams MC.

Nucleic Acids Res. 2019 Jan 25;47(2):666-678. doi: 10.1093/nar/gky1119.

2.

Biochemical and Biophysical Methods for Analysis of Poly(ADP-Ribose) Polymerase 1 and Its Interactions with Chromatin.

Chassé MH, Muthurajan UM, Clark NJ, Kramer MA, Chakravarthy S, Irving T, Luger K.

Methods Mol Biol. 2017;1608:231-253. doi: 10.1007/978-1-4939-6993-7_16.

3.

Bivalent interaction of the PZP domain of BRPF1 with the nucleosome impacts chromatin dynamics and acetylation.

Klein BJ, Muthurajan UM, Lalonde ME, Gibson MD, Andrews FH, Hepler M, Machida S, Yan K, Kurumizaka H, Poirier MG, Côté J, Luger K, Kutateladze TG.

Nucleic Acids Res. 2016 Jan 8;44(1):472-84. doi: 10.1093/nar/gkv1321. Epub 2015 Nov 30.

4.

Automodification switches PARP-1 function from chromatin architectural protein to histone chaperone.

Muthurajan UM, Hepler MR, Hieb AR, Clark NJ, Kramer M, Yao T, Luger K.

Proc Natl Acad Sci U S A. 2014 Sep 2;111(35):12752-7. doi: 10.1073/pnas.1405005111. Epub 2014 Aug 18.

5.

The histone variant H2A.W defines heterochromatin and promotes chromatin condensation in Arabidopsis.

Yelagandula R, Stroud H, Holec S, Zhou K, Feng S, Zhong X, Muthurajan UM, Nie X, Kawashima T, Groth M, Luger K, Jacobsen SE, Berger F.

Cell. 2014 Jul 3;158(1):98-109. doi: 10.1016/j.cell.2014.06.006.

6.

Molecular functions of the TLE tetramerization domain in Wnt target gene repression.

Chodaparambil JV, Pate KT, Hepler MR, Tsai BP, Muthurajan UM, Luger K, Waterman ML, Weis WI.

EMBO J. 2014 Apr 1;33(7):719-31. doi: 10.1002/embj.201387188. Epub 2014 Mar 3.

7.

Assembly of nucleosomal arrays from recombinant core histones and nucleosome positioning DNA.

Rogge RA, Kalashnikova AA, Muthurajan UM, Porter-Goff ME, Luger K, Hansen JC.

J Vis Exp. 2013 Sep 10;(79). doi: 10.3791/50354.

8.

The role of the nucleosome acidic patch in modulating higher order chromatin structure.

Kalashnikova AA, Porter-Goff ME, Muthurajan UM, Luger K, Hansen JC.

J R Soc Interface. 2013 Feb 27;10(82):20121022. doi: 10.1098/rsif.2012.1022. Print 2013 May 6. Review.

9.

Alternative modes of binding of poly(ADP-ribose) polymerase 1 to free DNA and nucleosomes.

Clark NJ, Kramer M, Muthurajan UM, Luger K.

J Biol Chem. 2012 Sep 21;287(39):32430-9. Epub 2012 Jul 31.

10.

Histone chaperone FACT coordinates nucleosome interaction through multiple synergistic binding events.

Winkler DD, Muthurajan UM, Hieb AR, Luger K.

J Biol Chem. 2011 Dec 2;286(48):41883-92. doi: 10.1074/jbc.M111.301465. Epub 2011 Oct 3.

11.

The linker region of macroH2A promotes self-association of nucleosomal arrays.

Muthurajan UM, McBryant SJ, Lu X, Hansen JC, Luger K.

J Biol Chem. 2011 Jul 8;286(27):23852-64. doi: 10.1074/jbc.M111.244871. Epub 2011 Apr 30.

12.

Biophysical analysis and small-angle X-ray scattering-derived structures of MeCP2-nucleosome complexes.

Yang C, van der Woerd MJ, Muthurajan UM, Hansen JC, Luger K.

Nucleic Acids Res. 2011 May;39(10):4122-35. doi: 10.1093/nar/gkr005. Epub 2011 Jan 29.

13.

The transcription factor Spn1 regulates gene expression via a highly conserved novel structural motif.

Pujari V, Radebaugh CA, Chodaparambil JV, Muthurajan UM, Almeida AR, Fischbeck JA, Luger K, Stargell LA.

J Mol Biol. 2010 Nov 19;404(1):1-15. doi: 10.1016/j.jmb.2010.09.040. Epub 2010 Sep 25.

14.

Nucleosome-binding affinity as a primary determinant of the nuclear mobility of the pioneer transcription factor FoxA.

Sekiya T, Muthurajan UM, Luger K, Tulin AV, Zaret KS.

Genes Dev. 2009 Apr 1;23(7):804-9. doi: 10.1101/gad.1775509.

15.

Reconstitution of nucleosome core particles from recombinant histones and DNA.

Dyer PN, Edayathumangalam RS, White CL, Bao Y, Chakravarthy S, Muthurajan UM, Luger K.

Methods Enzymol. 2004;375:23-44. No abstract available.

PMID:
14870657
16.

Crystal structures of histone Sin mutant nucleosomes reveal altered protein-DNA interactions.

Muthurajan UM, Bao Y, Forsberg LJ, Edayathumangalam RS, Dyer PN, White CL, Luger K.

EMBO J. 2004 Jan 28;23(2):260-71. Epub 2004 Jan 22.

17.

Structure and dynamics of nucleosomal DNA.

Muthurajan UM, Park YJ, Edayathumangalam RS, Suto RK, Chakravarthy S, Dyer PN, Luger K.

Biopolymers. 2003 Apr;68(4):547-56.

PMID:
12666179

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