Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 1 to 50 of 146

1.

Changes to virus taxonomy and the International Code of Virus Classification and Nomenclature ratified by the International Committee on Taxonomy of Viruses (2019).

Walker PJ, Siddell SG, Lefkowitz EJ, Mushegian AR, Dempsey DM, Dutilh BE, Harrach B, Harrison RL, Hendrickson RC, Junglen S, Knowles NJ, Kropinski AM, Krupovic M, Kuhn JH, Nibert M, Rubino L, Sabanadzovic S, Simmonds P, Varsani A, Zerbini FM, Davison AJ.

Arch Virol. 2019 Jun 12. doi: 10.1007/s00705-019-04306-w. [Epub ahead of print]

PMID:
31187277
2.

Michael Adams: new life member of the International Committee on Taxonomy of Viruses (ICTV).

Mushegian AR, Davison AJ.

Arch Virol. 2019 May 31. doi: 10.1007/s00705-019-04290-1. [Epub ahead of print] No abstract available.

PMID:
31152249
3.

Environmental Sources of Bacteria and Genetic Variation in Behavior Influence Host-Associated Microbiota.

Mushegian AA, Arbore R, Walser JC, Ebert D.

Appl Environ Microbiol. 2019 Apr 4;85(8). pii: e01547-18. doi: 10.1128/AEM.01547-18. Print 2019 Apr 15.

PMID:
30737344
4.

Additional changes to taxonomy ratified in a special vote by the International Committee on Taxonomy of Viruses (October 2018).

Siddell SG, Walker PJ, Lefkowitz EJ, Mushegian AR, Adams MJ, Dutilh BE, Gorbalenya AE, Harrach B, Harrison RL, Junglen S, Knowles NJ, Kropinski AM, Krupovic M, Kuhn JH, Nibert M, Rubino L, Sabanadzovic S, Sanfaçon H, Simmonds P, Varsani A, Zerbini FM, Davison AJ.

Arch Virol. 2019 Mar;164(3):943-946. doi: 10.1007/s00705-018-04136-2.

PMID:
30663020
5.

Modeling protein folding in vivo.

Sorokina I, Mushegian A.

Biol Direct. 2018 Jul 6;13(1):13. doi: 10.1186/s13062-018-0217-6.

6.

Changes to taxonomy and the International Code of Virus Classification and Nomenclature ratified by the International Committee on Taxonomy of Viruses (2018).

King AMQ, Lefkowitz EJ, Mushegian AR, Adams MJ, Dutilh BE, Gorbalenya AE, Harrach B, Harrison RL, Junglen S, Knowles NJ, Kropinski AM, Krupovic M, Kuhn JH, Nibert ML, Rubino L, Sabanadzovic S, Sanfaçon H, Siddell SG, Simmonds P, Varsani A, Zerbini FM, Davison AJ.

Arch Virol. 2018 Sep;163(9):2601-2631. doi: 10.1007/s00705-018-3847-1. Epub 2018 May 12.

PMID:
29754305
7.

Sequence analysis of malacoherpesvirus proteins: Pan-herpesvirus capsid module and replication enzymes with an ancient connection to "Megavirales".

Mushegian A, Karin EL, Pupko T.

Virology. 2018 Jan 1;513:114-128. doi: 10.1016/j.virol.2017.10.009. Epub 2017 Oct 21.

8.

Presence of microbiota reverses the relative performance of Daphnia on two experimental diets.

Mushegian AA, Ebert D.

Zoology (Jena). 2017 Dec;125:29-31. doi: 10.1016/j.zool.2017.07.007. Epub 2017 Aug 14.

PMID:
28830731
9.
10.

The microbiota of diapause: How host-microbe associations are formed after dormancy in an aquatic crustacean.

Mushegian AA, Walser JC, Sullam KE, Ebert D.

J Anim Ecol. 2018 Mar;87(2):400-413. doi: 10.1111/1365-2656.12709. Epub 2017 Jul 17.

PMID:
28556095
11.

Blocking a signal to host cell histones.

Mushegian AA.

Sci Signal. 2017 Apr 25;10(476). pii: eaan4979. doi: 10.1126/scisignal.aan4979.

PMID:
28442629
12.

Changes to taxonomy and the International Code of Virus Classification and Nomenclature ratified by the International Committee on Taxonomy of Viruses (2017).

Adams MJ, Lefkowitz EJ, King AMQ, Harrach B, Harrison RL, Knowles NJ, Kropinski AM, Krupovic M, Kuhn JH, Mushegian AR, Nibert M, Sabanadzovic S, Sanfaçon H, Siddell SG, Simmonds P, Varsani A, Zerbini FM, Gorbalenya AE, Davison AJ.

Arch Virol. 2017 Aug;162(8):2505-2538. doi: 10.1007/s00705-017-3358-5. Epub 2017 Apr 22.

PMID:
28434098
13.

Stress signals in plants.

Mushegian AA.

Sci Signal. 2017 Apr 18;10(475). pii: eaan4524. doi: 10.1126/scisignal.aan4524.

PMID:
28420757
14.

NLS protects DNA damage protein.

Mushegian AA.

Sci Signal. 2017 Apr 11;10(474). pii: eaan4046. doi: 10.1126/scisignal.aan4046.

PMID:
28400536
15.

Impaired phagocytosis in fragile X.

Mushegian AA.

Sci Signal. 2017 Apr 4;10(473). pii: eaan3520. doi: 10.1126/scisignal.aan3520.

PMID:
28377409
16.

Polyglutamine makes the switch.

Mushegian AA.

Sci Signal. 2017 Mar 28;10(472). pii: eaan3006. doi: 10.1126/scisignal.aan3006.

PMID:
28351951
17.

Autophagy and vitamin D.

Mushegian AA.

Sci Signal. 2017 Mar 21;10(471). pii: eaan2526. doi: 10.1126/scisignal.aan2526.

PMID:
28325820
18.

An insulin-like message from mother.

Mushegian AA.

Sci Signal. 2017 Mar 14;10(470). pii: eaan1464. doi: 10.1126/scisignal.aan1464.

PMID:
28292954
19.

UV radiation induces a gene's dual functionality.

Mushegian AA.

Sci Signal. 2017 Mar 7;10(469). pii: eaan0919. doi: 10.1126/scisignal.aan0919.

PMID:
28270553
20.

Ferroptosis-like cell death in plants.

Mushegian AA.

Sci Signal. 2017 Feb 28;10(468). pii: eaan0450. doi: 10.1126/scisignal.aan0450.

PMID:
28246195
21.

Sources of variation: Animal microbiota.

Mushegian AA.

Sci Signal. 2017 Feb 21;10(467). pii: eaam9011. doi: 10.1126/scisignal.aam9011.

PMID:
28223416
22.

Microbiome-dependent recombination shapes the host antibody repertoire.

Mushegian AA.

Sci Signal. 2017 Feb 21;10(467). pii: eaan0005. doi: 10.1126/scisignal.aan0005. Review.

PMID:
28223410
23.

When silencing mRNA, position matters.

Mushegian AA.

Sci Signal. 2017 Feb 14;10(466). pii: eaam9537. doi: 10.1126/scisignal.aam9537.

PMID:
28196909
24.

Recovering rRNA processing after heat shock.

Mushegian AA.

Sci Signal. 2017 Feb 7;10(465). pii: eaam9083. doi: 10.1126/scisignal.aam9083.

PMID:
28174283
25.

Guanidine throws the riboswitch.

Mushegian AA.

Sci Signal. 2017 Jan 31;10(464). pii: eaam8636. doi: 10.1126/scisignal.aam8636.

PMID:
28143908
26.

Harnessing innate immunity to fight neurodegeneration.

Mushegian AA.

Sci Signal. 2017 Jan 24;10(463). pii: eaam8102. doi: 10.1126/scisignal.aam8102.

PMID:
28119462
27.

50 years of the International Committee on Taxonomy of Viruses: progress and prospects.

Adams MJ, Lefkowitz EJ, King AM, Harrach B, Harrison RL, Knowles NJ, Kropinski AM, Krupovic M, Kuhn JH, Mushegian AR, Nibert ML, Sabanadzovic S, Sanfaçon H, Siddell SG, Simmonds P, Varsani A, Zerbini FM, Orton RJ, Smith DB, Gorbalenya AE, Davison AJ.

Arch Virol. 2017 May;162(5):1441-1446. doi: 10.1007/s00705-016-3215-y. Epub 2017 Jan 11.

PMID:
28078475
28.

A DNA-ribosylating toxin and its antidote.

Mushegian AA.

Sci Signal. 2017 Jan 3;10(460). pii: eaam6835. doi: 10.1126/scisignal.aam6835. No abstract available.

PMID:
28049771
29.

The role of the backbone torsion in protein folding.

Sorokina I, Mushegian A.

Biol Direct. 2016 Dec 1;11(1):64.

30.

Possibility and Challenges of Conversion of Current Virus Species Names to Linnaean Binomials.

Postler TS, Clawson AN, Amarasinghe GK, Basler CF, Bavari S, Benko M, Blasdell KR, Briese T, Buchmeier MJ, Bukreyev A, Calisher CH, Chandran K, Charrel R, Clegg CS, Collins PL, Juan Carlos T, Derisi JL, Dietzgen RG, Dolnik O, Dürrwald R, Dye JM, Easton AJ, Emonet S, Formenty P, Fouchier RAM, Ghedin E, Gonzalez JP, Harrach B, Hewson R, Horie M, Jiang D, Kobinger G, Kondo H, Kropinski AM, Krupovic M, Kurath G, Lamb RA, Leroy EM, Lukashevich IS, Maisner A, Mushegian AR, Netesov SV, Nowotny N, Patterson JL, Payne SL, PaWeska JT, Peters CJ, Radoshitzky SR, Rima BK, Romanowski V, Rubbenstroth D, Sabanadzovic S, Sanfaçon H, Salvato MS, Schwemmle M, Smither SJ, Stenglein MD, Stone DM, Takada A, Tesh RB, Tomonaga K, Tordo N, Towner JS, Vasilakis N, Volchkov VE, Wahl-Jensen V, Walker PJ, Wang LF, Varsani A, Whitfield AE, Zerbini FM, Kuhn JH.

Syst Biol. 2017 May 1;66(3):463-473. doi: 10.1093/sysbio/syw096.

31.

Changes in the composition of the RNA virome mark evolutionary transitions in green plants.

Mushegian A, Shipunov A, Elena SF.

BMC Biol. 2016 Aug 15;14:68. doi: 10.1186/s12915-016-0288-8.

32.

Ratification vote on taxonomic proposals to the International Committee on Taxonomy of Viruses (2016).

Adams MJ, Lefkowitz EJ, King AM, Harrach B, Harrison RL, Knowles NJ, Kropinski AM, Krupovic M, Kuhn JH, Mushegian AR, Nibert M, Sabanadzovic S, Sanfaçon H, Siddell SG, Simmonds P, Varsani A, Zerbini FM, Gorbalenya AE, Davison AJ.

Arch Virol. 2016 Oct;161(10):2921-49. doi: 10.1007/s00705-016-2977-6. Epub 2016 Jul 16.

PMID:
27424026
33.

Temperature-dependent benefits of bacterial exposure in embryonic development of Daphnia magna resting eggs.

Mushegian AA, Burcklen E, Schär TM, Ebert D.

J Exp Biol. 2016 Mar;219(Pt 6):897-904. doi: 10.1242/jeb.134759. Epub 2016 Jan 19.

34.

Rethinking "mutualism" in diverse host-symbiont communities.

Mushegian AA, Ebert D.

Bioessays. 2016 Jan;38(1):100-8. doi: 10.1002/bies.201500074. Epub 2015 Nov 16. Review.

PMID:
26568407
35.

Prokaryotic genes in eukaryotic genome sequences: when to infer horizontal gene transfer and when to suspect an actual microbe.

Artamonova II, Lappi T, Zudina L, Mushegian AR.

Environ Microbiol. 2015 Jul;17(7):2203-8. doi: 10.1111/1462-2920.12854. Epub 2015 Apr 28.

PMID:
25919787
36.

Distinct circular single-stranded DNA viruses exist in different soil types.

Reavy B, Swanson MM, Cock PJ, Dawson L, Freitag TE, Singh BK, Torrance L, Mushegian AR, Taliansky M.

Appl Environ Microbiol. 2015 Jun 15;81(12):3934-45. doi: 10.1128/AEM.03878-14. Epub 2015 Apr 3.

37.

Evolution of plant virus movement proteins from the 30K superfamily and of their homologs integrated in plant genomes.

Mushegian AR, Elena SF.

Virology. 2015 Feb;476:304-315. doi: 10.1016/j.virol.2014.12.012. Epub 2015 Jan 7.

38.

Chordopoxvirus protein F12 implicated in enveloped virion morphogenesis is an inactivated DNA polymerase.

Yutin N, Faure G, Koonin EV, Mushegian AR.

Biol Direct. 2014 Nov 6;9(1):22. doi: 10.1186/1745-6150-9-22.

39.

Water fleas require microbiota for survival, growth and reproduction.

Sison-Mangus MP, Mushegian AA, Ebert D.

ISME J. 2015 Jan;9(1):59-67. doi: 10.1038/ismej.2014.116. Epub 2014 Jul 15.

40.

Models of gene gain and gene loss for probabilistic reconstruction of gene content in the last universal common ancestor of life.

Kannan L, Li H, Rubinstein B, Mushegian A.

Biol Direct. 2013 Dec 19;8:32. doi: 10.1186/1745-6150-8-32.

41.

Genome sequence analysis indicates that the model eukaryote Nematostella vectensis harbors bacterial consorts.

Artamonova II, Mushegian AR.

Appl Environ Microbiol. 2013 Nov;79(22):6868-73. doi: 10.1128/AEM.01635-13. Epub 2013 Aug 30.

42.

Minimal genome encoding proteins with constrained amino acid repertoire.

Tsoy O, Yurieva M, Kucharavy A, O'Reilly M, Mushegian A.

Nucleic Acids Res. 2013 Oct;41(18):8444-51. doi: 10.1093/nar/gkt610. Epub 2013 Jul 19.

43.

NleB, a bacterial effector with glycosyltransferase activity, targets GAPDH function to inhibit NF-κB activation.

Gao X, Wang X, Pham TH, Feuerbacher LA, Lubos ML, Huang M, Olsen R, Mushegian A, Slawson C, Hardwidge PR.

Cell Host Microbe. 2013 Jan 16;13(1):87-99. doi: 10.1016/j.chom.2012.11.010. Epub 2013 Jan 16. Erratum in: Cell Host Microbe. 2013 Mar 13;13(3):371-2.

44.

Orthologous gene clusters and taxon signature genes for viruses of prokaryotes.

Kristensen DM, Waller AS, Yamada T, Bork P, Mushegian AR, Koonin EV.

J Bacteriol. 2013 Mar;195(5):941-50. doi: 10.1128/JB.01801-12. Epub 2012 Dec 7.

45.

Human family with sequence similarity 60 member A (FAM60A) protein: a new subunit of the Sin3 deacetylase complex.

Smith KT, Sardiu ME, Martin-Brown SA, Seidel C, Mushegian A, Egidy R, Florens L, Washburn MP, Workman JL.

Mol Cell Proteomics. 2012 Dec;11(12):1815-28. doi: 10.1074/mcp.M112.020255. Epub 2012 Sep 14.

46.

Metagenomic analysis of hadopelagic microbial assemblages thriving at the deepest part of Mediterranean Sea, Matapan-Vavilov Deep.

Smedile F, Messina E, La Cono V, Tsoy O, Monticelli LS, Borghini M, Giuliano L, Golyshin PN, Mushegian A, Yakimov MM.

Environ Microbiol. 2013 Jan;15(1):167-82. doi: 10.1111/j.1462-2920.2012.02827.x. Epub 2012 Jul 25.

PMID:
22827264
47.

Unidirectional evolutionary transitions in fungal mating systems and the role of transposable elements.

Gioti A, Mushegian AA, Strandberg R, Stajich JE, Johannesson H.

Mol Biol Evol. 2012 Oct;29(10):3215-26. Epub 2012 May 15.

PMID:
22593224
48.

The origin and evolution of G protein-coupled receptor kinases.

Mushegian A, Gurevich VV, Gurevich EV.

PLoS One. 2012;7(3):e33806. doi: 10.1371/journal.pone.0033806. Epub 2012 Mar 19.

49.

A metazoan ATAC acetyltransferase subunit that regulates mitogen-activated protein kinase signaling is related to an ancient molybdopterin synthase component.

Suganuma T, Mushegian A, Swanson SK, Florens L, Washburn MP, Workman JL.

Mol Cell Proteomics. 2012 May;11(5):90-9. doi: 10.1074/mcp.M111.015818. Epub 2012 Feb 18.

50.

Grand challenges in bioinformatics and computational biology.

Mushegian A.

Front Genet. 2011 Sep 15;2:60. doi: 10.3389/fgene.2011.00060. eCollection 2011. No abstract available.

Supplemental Content

Loading ...
Support Center