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Items: 1 to 50 of 431

1.

Hemiepiphyseodesis for Juvenile and Adolescent Tibia Vara Utilizing Percutaneous Transphyseal Screws.

Murphy RF, Pacult MA, Barfield WR, Mooney JF 3rd.

J Pediatr Orthop. 2020 Jan;40(1):17-22. doi: 10.1097/BPO.0000000000001067.

PMID:
31815857
2.

Image-derived models of cell organization changes during differentiation and drug treatments.

Ruan X, Johnson GR, Bierschenk I, Nitschke R, Boerries M, Busch H, Murphy RF.

Mol Biol Cell. 2019 Nov 27:mbcE19020080. doi: 10.1091/mbc.E19-02-0080. [Epub ahead of print]

PMID:
31774723
3.

Learning complex subcellular distribution patterns of proteins via analysis of immunohistochemistry images.

Xu YY, Shen HB, Murphy RF.

Bioinformatics. 2019 Nov 13. pii: btz844. doi: 10.1093/bioinformatics/btz844. [Epub ahead of print]

PMID:
31722369
4.

Transient protein accumulation at the center of the T cell antigen-presenting cell interface drives efficient IL-2 secretion.

Clark DJ, McMillan LE, Tan SL, Bellomo G, Massoue C, Thompson H, Mykhaylechko L, Alibhai D, Ruan X, Singleton KL, Du M, Hedges A, Schwartzberg PL, Verkade P, Murphy RF, Wülfing C.

Elife. 2019 Oct 30;8. pii: e45789. doi: 10.7554/eLife.45789.

5.

CellOrganizer: Learning and Using Cell Geometries for Spatial Cell Simulations.

Majarian TD, Cao-Berg I, Ruan X, Murphy RF.

Methods Mol Biol. 2019;1945:251-264. doi: 10.1007/978-1-4939-9102-0_11.

6.

Current concepts in neuromuscular scoliosis.

Murphy RF, Mooney JF 3rd.

Curr Rev Musculoskelet Med. 2019 Jun;12(2):220-227. doi: 10.1007/s12178-019-09552-8. Review.

7.

A rare case of type 2 entrapment of the median nerve after posterior elbow dislocation with MRI and ultrasound correlation.

O'Callaghan PK, Freeman K, Davis LC, Murphy RF.

Skeletal Radiol. 2019 Oct;48(10):1629-1636. doi: 10.1007/s00256-019-03201-4. Epub 2019 Mar 13.

PMID:
30868233
8.

Symptomatic Venous Thromboembolism After Adolescent Knee Arthroscopy.

Murphy RF, Heyworth B, Kramer D, Naqvi M, Miller PE, Yen YM, Kocher MS, Shore BJ.

J Pediatr Orthop. 2019 Mar;39(3):125-129. doi: 10.1097/BPO.0000000000000894.

PMID:
30730416
9.

Learning the sequence of influenza A genome assembly during viral replication using point process models and fluorescence in situ hybridization.

Majarian TD, Murphy RF, Lakdawala SS.

PLoS Comput Biol. 2019 Jan 28;15(1):e1006199. doi: 10.1371/journal.pcbi.1006199. eCollection 2019 Jan.

10.

Evaluation of methods for generative modeling of cell and nuclear shape.

Ruan X, Murphy RF.

Bioinformatics. 2019 Jul 15;35(14):2475-2485. doi: 10.1093/bioinformatics/bty983.

11.

Clinical and radiographic comparison of single-sugar-tong splint to long-arm cast immobilization for pediatric forearm fractures.

Murphy RF, Plumblee L, Sleasman B, Barfield W, Dow MA, Mooney JF 3rd.

J Pediatr Orthop B. 2019 Nov;28(6):549-552. doi: 10.1097/BPB.0000000000000572.

PMID:
30531491
12.

Septic Arthritis of the Hip-Risk Factors Associated With Secondary Surgery.

Murphy RF, Plumblee L, Barfield WB, Murphy JS, Fuerstenau N, Spence DD, Kelly DM, Dow MA, Mooney JF 3rd.

J Am Acad Orthop Surg. 2019 May 1;27(9):321-326. doi: 10.5435/JAAOS-D-18-00058.

PMID:
30520802
13.

Septic arthritis of the pediatric hip: update on diagnosis and treatment.

Mooney JF 3rd, Murphy RF.

Curr Opin Pediatr. 2019 Feb;31(1):79-85. doi: 10.1097/MOP.0000000000000703.

PMID:
30461509
14.

Experience with definitive instrumented final fusion after posterior-based distraction lengthening in patients with early-onset spinal deformity: single center results.

Murphy RF, Pacult MA, Barfield WR, Gross RH, Mooney JF 3rd.

J Pediatr Orthop B. 2019 Jan;28(1):10-16. doi: 10.1097/BPB.0000000000000559.

PMID:
30300258
15.

Learning Generative Models of Tissue Organization with Supervised GANs.

Han L, Murphy RF, Ramanan D.

IEEE Winter Conf Appl Comput Vis. 2018 Mar;2018:682-690. doi: 10.1109/WACV.2018.00080. Epub 2018 May 7.

16.

Periacetabular osteotomy for developmental hip dysplasia with labral tears: is arthrotomy or arthroscopy required?

Thanacharoenpanich S, Boyle MJ, Murphy RF, Miller PE, Millis MB, Kim YJ, Yen YM.

J Hip Preserv Surg. 2018 Jan 11;5(1):23-33. doi: 10.1093/jhps/hnx048. eCollection 2018 Jan.

17.

Conserved non-AUG uORFs revealed by a novel regression analysis of ribosome profiling data.

Spealman P, Naik AW, May GE, Kuersten S, Freeberg L, Murphy RF, McManus J.

Genome Res. 2018 Feb;28(2):214-222. doi: 10.1101/gr.221507.117. Epub 2017 Dec 18.

18.

Hemiepiphyseodesis for Juvenile and Adolescent Tibia Vara Utilizing Percutaneous Transphyseal Screws.

Murphy RF, Pacult MA, Barfield WR, Mooney JF 3rd.

J Pediatr Orthop. 2017 Sep 7. doi: 10.1097/BPO.0000000000001067. [Epub ahead of print]

PMID:
28891825
19.

Image-based spatiotemporal causality inference for protein signaling networks.

Ruan X, Wülfing C, Murphy RF.

Bioinformatics. 2017 Jul 15;33(14):i217-i224. doi: 10.1093/bioinformatics/btx258.

20.

The Crankshaft Phenomenon.

Murphy RF, Mooney JF 3rd.

J Am Acad Orthop Surg. 2017 Sep;25(9):e185-e193. doi: 10.5435/JAAOS-D-16-00584. Review.

PMID:
28837459
21.

Orthobiologics in Pediatric Orthopedics.

Murphy RF, Mooney JF 3rd.

Orthop Clin North Am. 2017 Jul;48(3):323-331. doi: 10.1016/j.ocl.2017.03.007. Epub 2017 Apr 5. Review.

PMID:
28577781
22.

Degradation of protein translation machinery by amino acid starvation-induced macroautophagy.

Gretzmeier C, Eiselein S, Johnson GR, Engelke R, Nowag H, Zarei M, Küttner V, Becker AC, Rigbolt KTG, Høyer-Hansen M, Andersen JS, Münz C, Murphy RF, Dengjel J.

Autophagy. 2017 Jun 3;13(6):1064-1075. doi: 10.1080/15548627.2016.1274485. Epub 2017 Apr 28.

23.

Sagittal plane parameters in growing rod patients following final fusion.

Murphy RF, Emans JB, Troy M, Miller PE, Hresko MT, Karlin LI, Hedequist DJ, Glotzbecker MP.

J Pediatr Orthop B. 2018 Mar;27(2):168-175. doi: 10.1097/BPB.0000000000000446.

PMID:
28328741
24.

Systems Imaging of the Immune Synapse.

Ambler R, Ruan X, Murphy RF, Wülfing C.

Methods Mol Biol. 2017;1584:409-421. doi: 10.1007/978-1-4939-6881-7_25.

25.

A method for characterizing phenotypic changes in highly variable cell populations and its application to high content screening of Arabidopsis thaliana protoplasts.

Johnson GR, Kangas JD, Dovzhenko A, Trojok R, Voigt K, Majarian TD, Palme K, Murphy RF.

Cytometry A. 2017 Apr;91(4):326-335. doi: 10.1002/cyto.a.23067. Epub 2017 Feb 28.

26.

Discrete cytosolic macromolecular BRAF complexes exhibit distinct activities and composition.

Diedrich B, Rigbolt KT, Röring M, Herr R, Kaeser-Pebernard S, Gretzmeier C, Murphy RF, Brummer T, Dengjel J.

EMBO J. 2017 Mar 1;36(5):646-663. doi: 10.15252/embj.201694732. Epub 2017 Jan 16.

27.

Evaluation of Pediatric Questions on the Orthopaedic In-Training Examination-An Update.

Murphy RF, Nunez L, Barfield WR, Mooney JF 3rd.

J Pediatr Orthop. 2017 Sep;37(6):e394-e397. doi: 10.1097/BPO.0000000000000913.

PMID:
27977498
28.

Sequence-Specific Pharmacokinetic and Pharmacodynamic Phase I/Ib Study of Olaparib Tablets and Carboplatin in Women's Cancer.

Lee JM, Peer CJ, Yu M, Amable L, Gordon N, Annunziata CM, Houston N, Goey AK, Sissung TM, Parker B, Minasian L, Chiou VL, Murphy RF, Widemann BC, Figg WD, Kohn EC.

Clin Cancer Res. 2017 Mar 15;23(6):1397-1406. doi: 10.1158/1078-0432.CCR-16-1546. Epub 2016 Sep 23.

29.

Complications following spine fusion for adolescent idiopathic scoliosis.

Murphy RF, Mooney JF 3rd.

Curr Rev Musculoskelet Med. 2016 Dec;9(4):462-469. Review.

30.

Surgical Management of Pediatric Developmental Dysplasia of the Hip.

Murphy RF, Kim YJ.

J Am Acad Orthop Surg. 2016 Sep;24(9):615-24. doi: 10.5435/JAAOS-D-15-00154. Review.

PMID:
27509038
31.

Point process models for localization and interdependence of punctate cellular structures.

Li Y, Majarian TD, Naik AW, Johnson GR, Murphy RF.

Cytometry A. 2016 Jul;89(7):633-43. doi: 10.1002/cyto.a.22873. Epub 2016 Jun 21.

32.

Computational spatiotemporal analysis identifies WAVE2 and cofilin as joint regulators of costimulation-mediated T cell actin dynamics.

Roybal KT, Buck TE, Ruan X, Cho BH, Clark DJ, Ambler R, Tunbridge HM, Zhang J, Verkade P, Wülfing C, Murphy RF.

Sci Signal. 2016 Apr 19;9(424):rs3. doi: 10.1126/scisignal.aad4149.

33.

Unbiased Rare Event Sampling in Spatial Stochastic Systems Biology Models Using a Weighted Ensemble of Trajectories.

Donovan RM, Tapia JJ, Sullivan DP, Faeder JR, Murphy RF, Dittrich M, Zuckerman DM.

PLoS Comput Biol. 2016 Feb 4;12(2):e1004611. doi: 10.1371/journal.pcbi.1004611. eCollection 2016 Feb.

34.

Active machine learning-driven experimentation to determine compound effects on protein patterns.

Naik AW, Kangas JD, Sullivan DP, Murphy RF.

Elife. 2016 Feb 3;5:e10047. doi: 10.7554/eLife.10047.

35.

Automated Learning of Subcellular Variation among Punctate Protein Patterns and a Generative Model of Their Relation to Microtubules.

Johnson GR, Li J, Shariff A, Rohde GK, Murphy RF.

PLoS Comput Biol. 2015 Dec 1;11(12):e1004614. doi: 10.1371/journal.pcbi.1004614. eCollection 2015 Dec.

36.

Allograft Bone Use in Pediatric Subaxial Cervical Spine Fusions.

Murphy RF, Glotzbecker MP, Hresko MT, Hedequist D.

J Pediatr Orthop. 2017 Mar;37(2):e140-e144. doi: 10.1097/BPO.0000000000000691.

PMID:
26600298
37.

Excision of symptomatic spinous process nonunion in adolescent athletes.

Murphy RF, Hedequist D.

Am J Orthop (Belle Mead NJ). 2015 Nov;44(11):515-7.

PMID:
26566552
38.

Early Outcomes of Pediatric Elbow Dislocation-Risk Factors Associated With Morbidity.

Murphy RF, Vuillermin C, Naqvi M, Miller PE, Bae DS, Shore BJ.

J Pediatr Orthop. 2017 Oct/Nov;37(7):440-446. doi: 10.1097/BPO.0000000000000676.

PMID:
26536011
39.

Building cell models and simulations from microscope images.

Murphy RF.

Methods. 2016 Mar 1;96:33-39. doi: 10.1016/j.ymeth.2015.10.011. Epub 2015 Oct 17. Review.

40.

Pediatric orthopaedic lower extremity trauma and venous thromboembolism.

Murphy RF, Naqvi M, Miller PE, Feldman L, Shore BJ.

J Child Orthop. 2015 Oct;9(5):381-4. doi: 10.1007/s11832-015-0697-1. Epub 2015 Oct 12.

41.

Joint modeling of cell and nuclear shape variation.

Johnson GR, Buck TE, Sullivan DP, Rohde GK, Murphy RF.

Mol Biol Cell. 2015 Nov 5;26(22):4046-56. doi: 10.1091/mbc.E15-06-0370. Epub 2015 Sep 9.

42.

Deciding when to stop: efficient experimentation to learn to predict drug-target interactions.

Temerinac-Ott M, Naik AW, Murphy RF.

BMC Bioinformatics. 2015 Jul 9;16:213. doi: 10.1186/s12859-015-0650-9.

43.

Quality, Safety, Value: From Theory to Practice Management What Should We Measure?

Shore BJ, Murphy RF, Hogue GD.

J Pediatr Orthop. 2015 Jul-Aug;35(5 Suppl 1):S61-6. doi: 10.1097/BPO.0000000000000551.

PMID:
26049309
44.

Image-based systems biology.

Figge MT, Murphy RF.

Cytometry A. 2015 Jun;87(6):459-61. doi: 10.1002/cyto.a.22663. No abstract available.

45.

Use of Vertical Expandable Prosthetic Titanium Rib (VEPTR) in the Treatment of Congenital Scoliosis Without Fused Ribs.

Murphy RF, Moisan A, Kelly DM, Warner WC Jr, Jones TL, Sawyer JR.

J Pediatr Orthop. 2016 Jun;36(4):329-35. doi: 10.1097/BPO.0000000000000460.

PMID:
25887832
46.

Phase 1 trial and pharmacokinetic study of the oral platinum analog satraplatin in children and young adults with refractory solid tumors including brain tumors.

Akshintala S, Marcus L, Warren KE, Murphy RF, Sissung TM, Srivastava A, Goodspeed WJ, Goodwin A, Brewer CC, Zalewski C, King KA, Kim A, Figg WD, Widemann BC.

Pediatr Blood Cancer. 2015 Apr;62(4):603-10. doi: 10.1002/pbc.25344. Epub 2015 Jan 3.

47.

Automated analysis of immunohistochemistry images identifies candidate location biomarkers for cancers.

Kumar A, Rao A, Bhavani S, Newberg JY, Murphy RF.

Proc Natl Acad Sci U S A. 2014 Dec 23;111(51):18249-54. doi: 10.1073/pnas.1415120112. Epub 2014 Dec 8.

48.

Musculoskeletal education in medical school: deficits in knowledge and strategies for improvement.

Murphy RF, LaPorte DM, Wadey VM; American Academy of Orthopaedic Surgeons Orthopaedic Education Study Group.

J Bone Joint Surg Am. 2014 Dec 3;96(23):2009-14. doi: 10.2106/JBJS.N.00354. Review.

PMID:
25471916
49.

Levels of Evidence in the Journal of Pediatric Orthopaedics: Update and Comparison to the Journal of Bone and Joint Surgery.

Murphy RF, Cibulas AM, Sawyer JR, Spence DD, Kelly DM.

J Pediatr Orthop. 2015 Oct-Nov;35(7):779-81. doi: 10.1097/BPO.0000000000000362. Review.

PMID:
25412071
50.

Subaxial cervical spine injuries in children and adolescents.

Murphy RF, Davidson AR, Kelly DM, Warner WC Jr, Sawyer JR.

J Pediatr Orthop. 2015 Mar;35(2):136-9. doi: 10.1097/BPO.0000000000000341.

PMID:
25379826

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