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Items: 41


Clinical outcomes of gamma-irradiated sterile cornea in aqueous drainage device surgery: a multicenter retrospective study.

Pan Q, Jampel HD, Ramulu P, Schwartz GF, Cotter F, Cute D, Daoud YJ, Murakami P, Stark WJ.

Eye (Lond). 2017 Mar;31(3):430-436. doi: 10.1038/eye.2016.230. Epub 2016 Nov 11.


Coverage, compliance, acceptability and feasibility of a program to prevent pre-eclampsia and eclampsia through calcium supplementation for pregnant women: an operations research study in one district of Nepal.

Thapa K, Sanghvi H, Rawlins B, Karki YB, Regmi K, Aryal S, Aryal Y, Murakami P, Bhattarai J, Suhowatsky S.

BMC Pregnancy Childbirth. 2016 Aug 24;16:241. doi: 10.1186/s12884-016-1033-6.


A multi-omic analysis of human naïve CD4+ T cells.

Mitchell CJ, Getnet D, Kim MS, Manda SS, Kumar P, Huang TC, Pinto SM, Nirujogi RS, Iwasaki M, Shaw PG, Wu X, Zhong J, Chaerkady R, Marimuthu A, Muthusamy B, Sahasrabuddhe NA, Raju R, Bowman C, Danilova L, Cutler J, Kelkar DS, Drake CG, Prasad TS, Marchionni L, Murakami PN, Scott AF, Shi L, Thierry-Mieg J, Thierry-Mieg D, Irizarry R, Cope L, Ishihama Y, Wang C, Gowda H, Pandey A.

BMC Syst Biol. 2015 Nov 6;9:75. doi: 10.1186/s12918-015-0225-4.


Pars plana vitrectomy and iris suture fixation of posteriorly dislocated intraocular lenses.

Soiberman U, Gehlbach PL, Murakami P, Stark WJ.

J Cataract Refract Surg. 2015 Jul;41(7):1454-60. doi: 10.1016/j.jcrs.2014.10.043.


Associations between safety culture and employee engagement over time: a retrospective analysis.

Daugherty Biddison EL, Paine L, Murakami P, Herzke C, Weaver SJ.

BMJ Qual Saf. 2016 Jan;25(1):31-7. doi: 10.1136/bmjqs-2014-003910. Epub 2015 Jun 3.


An imputation-based solution to using mismeasured covariates in propensity score analysis.

Webb-Vargas Y, Rudolph KE, Lenis D, Murakami P, Stuart EA.

Stat Methods Med Res. 2017 Aug;26(4):1824-1837. doi: 10.1177/0962280215588771. Epub 2015 Jun 2.


Outcomes Associated With Concurrent Iris-Sutured Intraocular Lens Placement and Subluxated Crystalline Lens Extraction.

McClellan SF, Soiberman U, Gehlbach PL, Murakami PN, Stark WJ.

JAMA Ophthalmol. 2015 Aug;133(8):867-73. doi: 10.1001/jamaophthalmol.2015.1097.


Distribution and mixing of old and new nonstructural carbon in two temperate trees.

Richardson AD, Carbone MS, Huggett BA, Furze ME, Czimczik CI, Walker JC, Xu X, Schaberg PG, Murakami P.

New Phytol. 2015 Apr;206(2):590-7. doi: 10.1111/nph.13273. Epub 2015 Jan 5.


Iris suture fixation of subluxated intraocular lenses.

Soiberman U, Pan Q, Daoud Y, Murakami P, Stark WJ.

Am J Ophthalmol. 2015 Feb;159(2):353-9. doi: 10.1016/j.ajo.2014.11.009. Epub 2014 Nov 7.


Dexmedetomidine preserves attention/calculation when used for cooperative and short-term intensive care unit sedation.

Goodwin HE, Gill RS, Murakami PN, Thompson CB, Lewin JJ 3rd, Mirski MA.

J Crit Care. 2013 Dec;28(6):1113.e7-1113.e10. doi: 10.1016/j.jcrc.2013.07.062. Epub 2013 Oct 18.


Age, allocation and availability of nonstructural carbon in mature red maple trees.

Carbone MS, Czimczik CI, Keenan TF, Murakami PF, Pederson N, Schaberg PG, Xu X, Richardson AD.

New Phytol. 2013 Dec;200(4):1145-55. doi: 10.1111/nph.12448. Epub 2013 Aug 27.


Improving immunization delivery using an electronic health record: the ImmProve project.

Bundy DG, Persing NM, Solomon BS, King TM, Murakami PN, Thompson RE, Engineer LD, Lehmann CU, Miller MR.

Acad Pediatr. 2013 Sep-Oct;13(5):458-65. doi: 10.1016/j.acap.2013.03.004. Epub 2013 Mar 14.


A single institution's 26-year experience with nonfunctional pancreatic neuroendocrine tumors: a validation of current staging systems and a new prognostic nomogram.

Ellison TA, Wolfgang CL, Shi C, Cameron JL, Murakami P, Mun LJ, Singhi AD, Cornish TC, Olino K, Meriden Z, Choti M, Diaz LA, Pawlik TM, Schulick RD, Hruban RH, Edil BH.

Ann Surg. 2014 Feb;259(2):204-12. doi: 10.1097/SLA.0b013e31828f3174.


Detection of RD(Rio) strain of Mycobacterium tuberculosis in tapirs (Tapirus terrestris) from a zoo in Brazil.

Murakami PS, Monego F, Ho JL, Gibson A, Javorouski ML, Bonat M, Lacerda O, Brockelt SR, Biesdorf SM, Nakatani SM, Riediger IN, Fuverki RB, Biava JS, Vieira RF, do Santos AP, de Barros Filho IR, Biondo AW.

J Zoo Wildl Med. 2012 Dec;43(4):872-5.


Seasonal dynamics and age of stemwood nonstructural carbohydrates in temperate forest trees.

Richardson AD, Carbone MS, Keenan TF, Czimczik CI, Hollinger DY, Murakami P, Schaberg PG, Xu X.

New Phytol. 2013 Feb;197(3):850-61. doi: 10.1111/nph.12042. Epub 2012 Nov 29.


Symptom index P-value and symptom sensitivity index P-value to determine symptom association between apnea and reflux in premature infants at term.

Glen DR, Murakami P, Nunez JS.

Dis Esophagus. 2013 Aug;26(6):549-56. doi: 10.1111/dote.12001. Epub 2012 Nov 16.


An outbreak of tuberculosis by Mycobacterium bovis in coatis (Nasua nasua).

Murakami PS, Monego F, Ho JL, Gibson A, Vilani RG, Soresini GC, Brockelt SR, Biesdorf SM, Fuverki RB, Nakatani SM, Riediger IN, Grazziotin AL, do Santos AP, de Barros Filho IR, Biondo AW.

J Zoo Wildl Med. 2012 Jun;43(2):338-41.


Genome-wide DNA methylation scan in major depressive disorder.

Sabunciyan S, Aryee MJ, Irizarry RA, Rongione M, Webster MJ, Kaufman WE, Murakami P, Lessard A, Yolken RH, Feinberg AP, Potash JB; GenRED Consortium.

PLoS One. 2012;7(4):e34451. doi: 10.1371/journal.pone.0034451. Epub 2012 Apr 12.


Bump hunting to identify differentially methylated regions in epigenetic epidemiology studies.

Jaffe AE, Murakami P, Lee H, Leek JT, Fallin MD, Feinberg AP, Irizarry RA.

Int J Epidemiol. 2012 Feb;41(1):200-9. doi: 10.1093/ije/dyr238.


Adaptation of the CHARM DNA methylation platform for the rat genome reveals novel brain region-specific differences.

Lee RS, Tamashiro KL, Aryee MJ, Murakami P, Seifuddin F, Herb B, Huo Y, Rongione M, Feinberg AP, Moran TH, Potash JB.

Epigenetics. 2011 Nov;6(11):1378-90. doi: 10.4161/epi.6.11.18072. Epub 2011 Nov 1.


Evaluation of an algorithm for detecting visual field defects due to chiasmal and postchiasmal lesions: the neurological hemifield test.

Boland MV, McCoy AN, Quigley HA, Miller NR, Subramanian PS, Ramulu PY, Murakami P, Danesh-Meyer HV.

Invest Ophthalmol Vis Sci. 2011 Oct 10;52(11):7959-65. doi: 10.1167/iovs.11-7868.


Assessing affymetrix GeneChip microarray quality.

McCall MN, Murakami PN, Lukk M, Huber W, Irizarry RA.

BMC Bioinformatics. 2011 May 7;12:137. doi: 10.1186/1471-2105-12-137.


Factors associated with pharyngoesophageal stricture in patients treated with concurrent chemotherapy and radiation therapy for oropharyngeal squamous cell carcinoma.

Best SR, Ha PK, Blanco RG, Saunders JR Jr, Zinreich ES, Levine MA, Pai SI, Walker M, Trachta J, Ulmer K, Murakami P, Thompson R, Califano JA, Messing BP.

Head Neck. 2011 Dec;33(12):1727-34. doi: 10.1002/hed.21657. Epub 2011 Jan 18.


Personalized epigenomic signatures that are stable over time and covary with body mass index.

Feinberg AP, Irizarry RA, Fradin D, Aryee MJ, Murakami P, Aspelund T, Eiriksdottir G, Harris TB, Launer L, Gudnason V, Fallin MD.

Sci Transl Med. 2010 Sep 15;2(49):49ra67. doi: 10.1126/scitranslmed.3001262. Erratum in: Sci Transl Med. 2011 Jan 12;3(65):65er1.


Comprehensive methylome map of lineage commitment from haematopoietic progenitors.

Ji H, Ehrlich LI, Seita J, Murakami P, Doi A, Lindau P, Lee H, Aryee MJ, Irizarry RA, Kim K, Rossi DJ, Inlay MA, Serwold T, Karsunky H, Ho L, Daley GQ, Weissman IL, Feinberg AP.

Nature. 2010 Sep 16;467(7313):338-42. doi: 10.1038/nature09367. Epub 2010 Aug 15.


Epigenetic memory in induced pluripotent stem cells.

Kim K, Doi A, Wen B, Ng K, Zhao R, Cahan P, Kim J, Aryee MJ, Ji H, Ehrlich LI, Yabuuchi A, Takeuchi A, Cunniff KC, Hongguang H, McKinney-Freeman S, Naveiras O, Yoon TJ, Irizarry RA, Jung N, Seita J, Hanna J, Murakami P, Jaenisch R, Weissleder R, Orkin SH, Weissman IL, Feinberg AP, Daley GQ.

Nature. 2010 Sep 16;467(7313):285-90. doi: 10.1038/nature09342.


Cytomegalovirus infection and the risk of mortality and frailty in older women: a prospective observational cohort study.

Wang GC, Kao WH, Murakami P, Xue QL, Chiou RB, Detrick B, McDyer JF, Semba RD, Casolaro V, Walston JD, Fried LP.

Am J Epidemiol. 2010 May 15;171(10):1144-52. doi: 10.1093/aje/kwq062. Epub 2010 Apr 16.


Cognitive improvement during continuous sedation in critically ill, awake and responsive patients: the Acute Neurological ICU Sedation Trial (ANIST).

Mirski MA, Lewin JJ 3rd, Ledroux S, Thompson C, Murakami P, Zink EK, Griswold M.

Intensive Care Med. 2010 Sep;36(9):1505-13. doi: 10.1007/s00134-010-1874-9. Epub 2010 Apr 8.


Primary repair vs. colostomy in colon injuries.

Robles-Castillo J, Murillo-Zolezzi A, Murakami PD, Silva-Velasco J.

Cir Cir. 2009 Sep-Oct;77(5):365-8.


Differential methylation of tissue- and cancer-specific CpG island shores distinguishes human induced pluripotent stem cells, embryonic stem cells and fibroblasts.

Doi A, Park IH, Wen B, Murakami P, Aryee MJ, Irizarry R, Herb B, Ladd-Acosta C, Rho J, Loewer S, Miller J, Schlaeger T, Daley GQ, Feinberg AP.

Nat Genet. 2009 Dec;41(12):1350-3. doi: 10.1038/ng.471. Epub 2009 Nov 1.


Two complex genotypes relevant to the kynurenine pathway and melanotropin function show association with schizophrenia and bipolar disorder.

Miller CL, Murakami P, Ruczinski I, Ross RG, Sinkus M, Sullivan B, Leonard S.

Schizophr Res. 2009 Sep;113(2-3):259-67. doi: 10.1016/j.schres.2009.05.014. Epub 2009 Jun 6.


Stem girdling manipulates leaf sugar concentrations and anthocyanin expression in sugar maple trees during autumn.

Murakami PF, Schaberg PG, Shane JB.

Tree Physiol. 2008 Oct;28(10):1467-73.


Dynamics of low-temperature acclimation in temperate and boreal conifer foliage in a mild winter climate.

Strimbeck GR, Kjellsen TD, Schaberg PG, Murakami PF.

Tree Physiol. 2008 Sep;28(9):1365-74.


Common structure of rare replication-deficient E1-positive particles in adenoviral vector batches.

Murakami P, Havenga M, Fawaz F, Vogels R, Marzio G, Pungor E, Files J, Do L, Goudsmit J, McCaman M.

J Virol. 2004 Jun;78(12):6200-8.


Acid mist and soil Ca and Al alter the mineral nutrition and physiology of red spruce.

Schaberg PG, Dehayes DH, Hawley GJ, Strimbeck GR, Cumming JR, Murakami PF, Borer CH.

Tree Physiol. 2000 Jan;20(2):73-85.


Factors influencing red expression in autumn foliage of sugar maple trees.

Schaberg PG, Van Den Berg AK, Murakami PF, Shane JB, Donnelly JR.

Tree Physiol. 2003 Apr;23(5):325-33.


A single short stretch of homology between adenoviral vector and packaging cell line can give rise to cytopathic effect-inducing, helper-dependent E1-positive particles.

Murakami P, Pungor E, Files J, Do L, van Rijnsoever R, Vogels R, Bout A, McCaman M.

Hum Gene Ther. 2002 May 20;13(8):909-20.


Analysis of recombinant adenoviruses using an integrated microfluidic chip-based system.

McCaman MT, Murakami P, Pungor E Jr, Hahnenberger KM, Hancock WS.

Anal Biochem. 2001 Apr 15;291(2):262-8.


Capillary zone electrophoresis of a recombinant adenovirus.

Mann B, Traina JA, Soderblom C, Murakami PK, Lehmberg E, Lee D, Irving J, Nestaas E, Pungor E.

J Chromatogr A. 2000 Oct 20;895(1-2):329-37.


Quantitation of adenovirus DNA and virus particles with the PicoGreen fluorescent Dye.

Murakami P, McCaman MT.

Anal Biochem. 1999 Oct 15;274(2):283-8.


Reversed-phase high-performance liquid chromatographic assay for the adenovirus type 5 proteome.

Lehmberg E, Traina JA, Chakel JA, Chang RJ, Parkman M, McCaman MT, Murakami PK, Lahidji V, Nelson JW, Hancock WS, Nestaas E, Pungor E Jr.

J Chromatogr B Biomed Sci Appl. 1999 Sep 24;732(2):411-23.


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