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Developmental dynamics of stem starch accumulation in Sorghum bicolor.

McKinley BA, Casto AL, Rooney WL, Mullet JE.

Plant Direct. 2018 Aug 20;2(8):e00074. doi: 10.1002/pld3.74. eCollection 2018 Aug.


Sorghum stem aerenchyma formation is regulated by SbNAC_D during internode development.

Casto AL, McKinley BA, Yu KMJ, Rooney WL, Mullet JE.

Plant Direct. 2018 Nov 12;2(11):e00085. doi: 10.1002/pld3.85. eCollection 2018 Nov.


Maturity2, a novel regulator of flowering time in Sorghum bicolor, increases expression of SbPRR37 and SbCO in long days delaying flowering.

Casto AL, Mattison AJ, Olson SN, Thakran M, Rooney WL, Mullet JE.

PLoS One. 2019 Apr 10;14(4):e0212154. doi: 10.1371/journal.pone.0212154. eCollection 2019.


Variation in energy sorghum hybrid TX08001 biomass composition and lignin chemistry during development under irrigated and non-irrigated field conditions.

McKinley BA, Olson SN, Ritter KB, Herb DW, Karlen SD, Lu F, Ralph J, Rooney WL, Mullet JE.

PLoS One. 2018 Apr 23;13(4):e0195863. doi: 10.1371/journal.pone.0195863. eCollection 2018.


The Sorghum bicolor reference genome: improved assembly, gene annotations, a transcriptome atlas, and signatures of genome organization.

McCormick RF, Truong SK, Sreedasyam A, Jenkins J, Shu S, Sims D, Kennedy M, Amirebrahimi M, Weers BD, McKinley B, Mattison A, Morishige DT, Grimwood J, Schmutz J, Mullet JE.

Plant J. 2018 Jan;93(2):338-354. doi: 10.1111/tpj.13781. Epub 2017 Dec 28.


Sorghum Dw2 Encodes a Protein Kinase Regulator of Stem Internode Length.

Hilley JL, Weers BD, Truong SK, McCormick RF, Mattison AJ, McKinley BA, Morishige DT, Mullet JE.

Sci Rep. 2017 Jul 4;7(1):4616. doi: 10.1038/s41598-017-04609-5.


Dynamics of gene expression during development and expansion of vegetative stem internodes of bioenergy sorghum.

Kebrom TH, McKinley B, Mullet JE.

Biotechnol Biofuels. 2017 Jun 21;10:159. doi: 10.1186/s13068-017-0848-3. eCollection 2017.


High-biomass C4 grasses-Filling the yield gap.

Mullet JE.

Plant Sci. 2017 Aug;261:10-17. doi: 10.1016/j.plantsci.2017.05.003. Epub 2017 May 16. Review.


Bioenergy Sorghum Crop Model Predicts VPD-Limited Transpiration Traits Enhance Biomass Yield in Water-Limited Environments.

Truong SK, McCormick RF, Mullet JE.

Front Plant Sci. 2017 Mar 21;8:335. doi: 10.3389/fpls.2017.00335. eCollection 2017.


3D Sorghum Reconstructions from Depth Images Identify QTL Regulating Shoot Architecture.

McCormick RF, Truong SK, Mullet JE.

Plant Physiol. 2016 Oct;172(2):823-834. Epub 2016 Aug 15.


Transcriptome Profiling of Tiller Buds Provides New Insights into PhyB Regulation of Tillering and Indeterminate Growth in Sorghum.

Kebrom TH, Mullet JE.

Plant Physiol. 2016 Apr;170(4):2232-50. doi: 10.1104/pp.16.00014. Epub 2016 Feb 18.


Harnessing Genetic Variation in Leaf Angle to Increase Productivity of Sorghum bicolor.

Truong SK, McCormick RF, Rooney WL, Mullet JE.

Genetics. 2015 Nov;201(3):1229-38. doi: 10.1534/genetics.115.178608. Epub 2015 Aug 31.


RIG: Recalibration and interrelation of genomic sequence data with the GATK.

McCormick RF, Truong SK, Mullet JE.

G3 (Bethesda). 2015 Feb 13;5(4):655-65. doi: 10.1534/g3.115.017012.


Photosynthetic leaf area modulates tiller bud outgrowth in sorghum.

Kebrom TH, Mullet JE.

Plant Cell Environ. 2015 Aug;38(8):1471-8. doi: 10.1111/pce.12500. Epub 2015 Feb 14.


Drought adaptation of stay-green sorghum is associated with canopy development, leaf anatomy, root growth, and water uptake.

Borrell AK, Mullet JE, George-Jaeggli B, van Oosterom EJ, Hammer GL, Klein PE, Jordan DR.

J Exp Bot. 2014 Nov;65(21):6251-63. doi: 10.1093/jxb/eru232. Epub 2014 Jun 13.


Resolution of genetic map expansion caused by excess heterozygosity in plant recombinant inbred populations.

Truong SK, McCormick RF, Morishige DT, Mullet JE.

G3 (Bethesda). 2014 Aug 15;4(10):1963-9. doi: 10.1534/g3.114.012468.


Sorghum phytochrome B inhibits flowering in long days by activating expression of SbPRR37 and SbGHD7, repressors of SbEHD1, SbCN8 and SbCN12.

Yang S, Murphy RL, Morishige DT, Klein PE, Rooney WL, Mullet JE.

PLoS One. 2014 Aug 14;9(8):e105352. doi: 10.1371/journal.pone.0105352. eCollection 2014.


Stay-green alleles individually enhance grain yield in sorghum under drought by modifying canopy development and water uptake patterns.

Borrell AK, van Oosterom EJ, Mullet JE, George-Jaeggli B, Jordan DR, Klein PE, Hammer GL.

New Phytol. 2014 Aug;203(3):817-30. doi: 10.1111/nph.12869. Epub 2014 Jun 4.


CONSTANS is a photoperiod regulated activator of flowering in sorghum.

Yang S, Weers BD, Morishige DT, Mullet JE.

BMC Plant Biol. 2014 May 28;14:148. doi: 10.1186/1471-2229-14-148.


Digital genotyping of sorghum - a diverse plant species with a large repeat-rich genome.

Morishige DT, Klein PE, Hilley JL, Sahraeian SM, Sharma A, Mullet JE.

BMC Genomics. 2013 Jul 5;14:448. doi: 10.1186/1471-2164-14-448.


Coincident light and clock regulation of pseudoresponse regulator protein 37 (PRR37) controls photoperiodic flowering in sorghum.

Murphy RL, Klein RR, Morishige DT, Brady JA, Rooney WL, Miller FR, Dugas DV, Klein PE, Mullet JE.

Proc Natl Acad Sci U S A. 2011 Sep 27;108(39):16469-74. doi: 10.1073/pnas.1106212108. Epub 2011 Sep 19.


Sequence analysis of bacterial artificial chromosome clones from the apospory-specific genomic region of Pennisetum and Cenchrus.

Conner JA, Goel S, Gunawan G, Cordonnier-Pratt MM, Johnson VE, Liang C, Wang H, Pratt LH, Mullet JE, DeBarry J, Yang L, Bennetzen JL, Klein PE, Ozias-Akins P.

Plant Physiol. 2008 Jul;147(3):1396-411. doi: 10.1104/pp.108.119081. Epub 2008 May 28.


A BAC pooling strategy combined with PCR-based screenings in a large, highly repetitive genome enables integration of the maize genetic and physical maps.

Yim YS, Moak P, Sanchez-Villeda H, Musket TA, Close P, Klein PE, Mullet JE, McMullen MD, Fang Z, Schaeffer ML, Gardiner JM, Coe EH Jr, Davis GL.

BMC Genomics. 2007 Feb 9;8:47.


Sorghum expressed sequence tags identify signature genes for drought, pathogenesis, and skotomorphogenesis from a milestone set of 16,801 unique transcripts.

Pratt LH, Liang C, Shah M, Sun F, Wang H, Reid SP, Gingle AR, Paterson AH, Wing R, Dean R, Klein R, Nguyen HT, Ma HM, Zhao X, Morishige DT, Mullet JE, Cordonnier-Pratt MM.

Plant Physiol. 2005 Oct;139(2):869-84. Epub 2005 Sep 16.


Sorghum bicolor's transcriptome response to dehydration, high salinity and ABA.

Buchanan CD, Lim S, Salzman RA, Kagiampakis I, Morishige DT, Weers BD, Klein RR, Pratt LH, Cordonnier-Pratt MM, Klein PE, Mullet JE.

Plant Mol Biol. 2005 Jul;58(5):699-720.


Comprehensive molecular cytogenetic analysis of sorghum genome architecture: distribution of euchromatin, heterochromatin, genes and recombination in comparison to rice.

Kim JS, Islam-Faridi MN, Klein PE, Stelly DM, Price HJ, Klein RR, Mullet JE.

Genetics. 2005 Dec;171(4):1963-76. Epub 2005 Sep 2.


Fertility restorer locus Rf1 [corrected] of sorghum (Sorghum bicolor L.) encodes a pentatricopeptide repeat protein not present in the colinear region of rice chromosome 12.

Klein RR, Klein PE, Mullet JE, Minx P, Rooney WL, Schertz KF.

Theor Appl Genet. 2005 Oct;111(6):994-1012. Epub 2005 Aug 3. Erratum in: Theor Appl Genet. 2006 Jan;112(2):388.


Transcriptional profiling of sorghum induced by methyl jasmonate, salicylic acid, and aminocyclopropane carboxylic acid reveals cooperative regulation and novel gene responses.

Salzman RA, Brady JA, Finlayson SA, Buchanan CD, Summer EJ, Sun F, Klein PE, Klein RR, Pratt LH, Cordonnier-Pratt MM, Mullet JE.

Plant Physiol. 2005 May;138(1):352-68. Epub 2005 Apr 29.


Molecular cytogenetic maps of sorghum linkage groups 2 and 8.

Kim JS, Klein PE, Klein RR, Price HJ, Mullet JE, Stelly DM.

Genetics. 2005 Feb;169(2):955-65. Epub 2004 Oct 16.


Chromosome identification and nomenclature of Sorghum bicolor.

Kim JS, Klein PE, Klein RR, Price HJ, Mullet JE, Stelly DM.

Genetics. 2005 Feb;169(2):1169-73. Epub 2004 Oct 16.


High-resolution physical mapping in Pennisetum squamulatum reveals extensive chromosomal heteromorphism of the genomic region associated with apomixis.

Akiyama Y, Conner JA, Goel S, Morishige DT, Mullet JE, Hanna WW, Ozias-Akins P.

Plant Physiol. 2004 Apr;134(4):1733-41. Epub 2004 Apr 2.


Sequence-based alignment of sorghum chromosome 3 and rice chromosome 1 reveals extensive conservation of gene order and one major chromosomal rearrangement.

Klein PE, Klein RR, Vrebalov J, Mullet JE.

Plant J. 2003 Jun;34(5):605-21. Erratum in: Plant J. 2003 Nov;36(3):430-2.


A molecular cytogenetic map of sorghum chromosome 1. Fluorescence in situ hybridization analysis with mapped bacterial artificial chromosomes.

Islam-Faridi MN, Childs KL, Klein PE, Hodnett G, Menz MA, Klein RR, Rooney WL, Mullet JE, Stelly DM, Price HJ.

Genetics. 2002 May;161(1):345-53.


A high-density genetic map of Sorghum bicolor (L.) Moench based on 2926 AFLP, RFLP and SSR markers.

Menz MA, Klein RR, Mullet JE, Obert JA, Unruh NC, Klein PE.

Plant Mol Biol. 2002 Mar-Apr;48(5-6):483-99.


Integrated karyotyping of sorghum by in situ hybridization of landed BACs.

Kim JS, Childs KL, Islam-Faridi MN, Menz MA, Klein RR, Klein PE, Price HJ, Mullet JE, Stelly DM.

Genome. 2002 Apr;45(2):402-12.


Sorghum bicolor - an important species for comparative grass genomics and a source of beneficial genes for agriculture.

Mullet JE, Klein RR, Klein PE.

Curr Opin Plant Biol. 2002 Apr;5(2):118-21. Review.


Comparative Assessment of Variation among Sorghum Germplasm Accessions Using Seed Morphology and RAPD Measurements.

Dahlberg JA, Zhang X, Hart GE, Mullet JE.

Crop Sci. 2002 Jan;42(1):291-296.


Analysis of barley chloroplast psbD light-responsive promoter elements in transplastomic tobacco.

Thum KE, Kim M, Morishige DT, Eibl C, Koop HU, Mullet JE.

Plant Mol Biol. 2001 Oct;47(3):353-66.


Mapping genes on an integrated sorghum genetic and physical map using cDNA selection technology.

Childs KL, Klein RR, Klein PE, Morishige DT, Mullet JE.

Plant J. 2001 Aug;27(3):243-55.


Jasmonic acid signaling modulates ozone-induced hypersensitive cell death.

Rao MV, Lee H, Creelman RA, Mullet JE, Davis KR.

Plant Cell. 2000 Sep;12(9):1633-46.


Molecular mapping of QTLs conferring stay-green in grain sorghum (Sorghum bicolor L. Moench).

Xu W, Subudhi PK, Crasta OR, Rosenow DT, Mullet JE, Nguyen HT.

Genome. 2000 Jun;43(3):461-9.


A high-throughput AFLP-based method for constructing integrated genetic and physical maps: progress toward a sorghum genome map.

Klein PE, Klein RR, Cartinhour SW, Ulanch PE, Dong J, Obert JA, Morishige DT, Schlueter SD, Childs KL, Ale M, Mullet JE.

Genome Res. 2000 Jun;10(6):789-807.


The mechanism of rhythmic ethylene production in sorghum. The role of phytochrome B and simulated shading.

Finlayson SA, Lee IJ, Mullet JE, Morgan PW.

Plant Physiol. 1999 Mar;119(3):1083-9. Erratum in: Plant Physiol 1999 May;120(1):341.

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