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Role of Macrophage Dopamine Receptors in Mediating Cytokine Production: Implications for Neuroinflammation in the Context of HIV-Associated Neurocognitive Disorders.

Nolan RA, Muir R, Runner K, Haddad EK, Gaskill PJ.

J Neuroimmune Pharmacol. 2018 Dec 5. doi: 10.1007/s11481-018-9825-2. [Epub ahead of print]


Subcortical Brain Involvement Is Associated With Impaired Performance on the Psychomotor Vigilance Task After Minor Stroke.

Malik PRA, Muir RT, Black SE, Gao F, Swartz RH, Murray BJ, Boulos MI.

Neurorehabil Neural Repair. 2018 Nov;32(11):999-1007. doi: 10.1177/1545968318804415. Epub 2018 Oct 24.


Author Correction: Maternal obesity-induced decreases in plasma, hepatic and uterine polyunsaturated fatty acids during labour is reversed through improved nutrition at conception.

Muir R, Liu G, Khan R, Shmygol A, Quenby S, Gibson RA, Muhlhausler B, Elmes M.

Sci Rep. 2018 Sep 27;8(1):14716. doi: 10.1038/s41598-018-33001-0.


Oral vancomycin induces clinical and mucosal remission of colitis in children with primary sclerosing cholangitis-ulcerative colitis.

Tan LZ, Reilly CR, Steward-Harrison LC, Balouch F, Muir R, Lewindon PJ.

Gut. 2018 Aug 21. pii: gutjnl-2018-316599. doi: 10.1136/gutjnl-2018-316599. [Epub ahead of print] No abstract available.


Rapid HIV RNA rebound after antiretroviral treatment interruption in persons durably suppressed in Fiebig I acute HIV infection.

Colby DJ, Trautmann L, Pinyakorn S, Leyre L, Pagliuzza A, Kroon E, Rolland M, Takata H, Buranapraditkun S, Intasan J, Chomchey N, Muir R, Haddad EK, Tovanabutra S, Ubolyam S, Bolton DL, Fullmer BA, Gorelick RJ, Fox L, Crowell TA, Trichavaroj R, O'Connell R, Chomont N, Kim JH, Michael NL, Robb ML, Phanuphak N, Ananworanich J; RV411 study group.

Nat Med. 2018 Jul;24(7):923-926. doi: 10.1038/s41591-018-0026-6. Epub 2018 Jun 11.


Maternal obesity-induced decreases in plasma, hepatic and uterine polyunsaturated fatty acids during labour is reversed through improved nutrition at conception.

Muir R, Liu G, Khan R, Shmygol A, Quenby S, Gibson RA, Muhlhausler B, Elmes M.

Sci Rep. 2018 Feb 21;8(1):3389. doi: 10.1038/s41598-018-21809-9. Erratum in: Sci Rep. 2018 Sep 27;8(1):14716.


FDC:TFH Interactions within Cervical Lymph Nodes of SIV-Infected Rhesus Macaques.

Dave RS, Sharma RK, Muir RR, Haddad E, Gumber S, Villinger F, Nehra AP, Khan ZK, Wigdahl B, Ansari AA, Byrareddy SN, Jain P.

J Neuroimmune Pharmacol. 2018 Jun;13(2):204-218. doi: 10.1007/s11481-017-9775-0. Epub 2017 Dec 29.


cAMP signaling regulates DNA hydroxymethylation by augmenting the intracellular labile ferrous iron pool.

Camarena V, Sant DW, Huff TC, Mustafi S, Muir RK, Aron AT, Chang CJ, Renslo AR, Monje PV, Wang G.

Elife. 2017 Dec 14;6. pii: e29750. doi: 10.7554/eLife.29750.


Single-shot optical recorder with sub-picosecond resolution and scalable record length on a semiconductor wafer.

Muir R, Heebner J.

Opt Lett. 2017 Nov 1;42(21):4414-4417. doi: 10.1364/OL.42.004414.


The leading-edge vortex of swift wing-shaped delta wings.

Muir RE, Arredondo-Galeana A, Viola IM.

R Soc Open Sci. 2017 Aug 23;4(8):170077. doi: 10.1098/rsos.170077. eCollection 2017 Aug.


Reply to: "Periodic Limb Movements During Sleep and White Matter MRI Hyperintensity in Minor Stroke or TIA".

Boulos MI, Muir RT, Gao F, Lim AS, Swartz RH, Black SE, Walters AS, Murray BJ.

Sleep. 2017 May 1;40(5). doi: 10.1093/sleep/zsx060. No abstract available.


Delayed differentiation of potent effector CD8+ T cells reducing viremia and reservoir seeding in acute HIV infection.

Takata H, Buranapraditkun S, Kessing C, Fletcher JL, Muir R, Tardif V, Cartwright P, Vandergeeten C, Bakeman W, Nichols CN, Pinyakorn S, Hansasuta P, Kroon E, Chalermchai T, O'Connell R, Kim J, Phanuphak N, Robb ML, Michael NL, Chomont N, Haddad EK, Ananworanich J, Trautmann L; RV254/SEARCH010 and the RV304/SEARCH013 Study Groups.

Sci Transl Med. 2017 Feb 15;9(377). pii: eaag1809. doi: 10.1126/scitranslmed.aag1809.


A randomised placebo-controlled trial investigating efficacy and mechanisms of low-dose intradermal allergen immunotherapy in treatment of seasonal allergic rhinitis.

Slovick A, Douiri A, Muir R, Guerra A, Tsioulos K, Haye E, Lam EPS, Kelly J, Peacock JL, Ying S, Shamji MH, Cousins DJ, Durham SR, Till SJ.

Southampton (UK): NIHR Journals Library; 2016 Dec.


Intradermal grass pollen immunotherapy increases TH2 and IgE responses and worsens respiratory allergic symptoms.

Slovick A, Douiri A, Muir R, Guerra A, Tsioulos K, Hay E, Lam EPS, Kelly J, Peacock JL, Ying S, Shamji MH, Cousins DJ, Durham SR, Till SJ.

J Allergy Clin Immunol. 2017 Jun;139(6):1830-1839.e13. doi: 10.1016/j.jaci.2016.09.024. Epub 2016 Oct 20.


Nonnegative matrix factorization and sparse representation for the automated detection of periodic limb movements in sleep.

Shokrollahi M, Krishnan S, Dopsa DD, Muir RT, Black SE, Swartz RH, Murray BJ, Boulos MI.

Med Biol Eng Comput. 2016 Nov;54(11):1641-1654. Epub 2016 Feb 13.


Altered Memory Circulating T Follicular Helper-B Cell Interaction in Early Acute HIV Infection.

Muir R, Metcalf T, Tardif V, Takata H, Phanuphak N, Kroon E, Colby DJ, Trichavaroj R, Valcour V, Robb ML, Michael NL, Ananworanich J, Trautmann L, Haddad EK; RV254/SEARCH010 RV304/SEARCH 013 Study Groups.

PLoS Pathog. 2016 Jul 27;12(7):e1005777. doi: 10.1371/journal.ppat.1005777. eCollection 2016 Jul.


The m.13051G>A mitochondrial DNA mutation results in variable neurology and activated mitophagy.

Dombi E, Diot A, Morten K, Carver J, Lodge T, Fratter C, Ng YS, Liao C, Muir R, Blakely EL, Hargreaves I, Al-Dosary M, Sarkar G, Hickman SJ, Downes SM, Jayawant S, Yu-Wai-Man P, Taylor RW, Poulton J.

Neurology. 2016 May 17;86(20):1921-3. doi: 10.1212/WNL.0000000000002688. Epub 2016 Apr 22. No abstract available.


Determination of ubiquitin fitness landscapes under different chemical stresses in a classroom setting.

Mavor D, Barlow K, Thompson S, Barad BA, Bonny AR, Cario CL, Gaskins G, Liu Z, Deming L, Axen SD, Caceres E, Chen W, Cuesta A, Gate RE, Green EM, Hulce KR, Ji W, Kenner LR, Mensa B, Morinishi LS, Moss SM, Mravic M, Muir RK, Niekamp S, Nnadi CI, Palovcak E, Poss EM, Ross TD, Salcedo EC, See SK, Subramaniam M, Wong AW, Li J, Thorn KS, Conchúir SÓ, Roscoe BP, Chow ED, DeRisi JL, Kortemme T, Bolon DN, Fraser JS.

Elife. 2016 Apr 25;5. pii: e15802. doi: 10.7554/eLife.15802.


Spectral X-Ray Diffraction using a 6 Megapixel Photon Counting Array Detector.

Muir RD, Pogranichniy NR, Muir JL, Sullivan SZ, Battaile KP, Mulichak AM, Toth SJ, Keefe LJ, Simpson GJ.

Proc SPIE Int Soc Opt Eng. 2015 Mar 12;9401:940109.


Synchronous-digitization for Video Rate Polarization Modulated Beam Scanning Second Harmonic Generation Microscopy.

Sullivan SZ, DeWalt EL, Schmitt PD, Muir RM, Simpson GJ.

Proc SPIE Int Soc Opt Eng. 2015 Mar 9;9330:93300A.


Multi-channel beam-scanning imaging at kHz frame rates by Lissajous trajectory microscopy.

Newman JA, Sullivan SZ, Muir RD, Sreehari S, Bouman CA, Simpson GJ.

Proc SPIE Int Soc Opt Eng. 2015 Mar 9;9330:933009.


Early Mucosal Healing with Exclusive Enteral Nutrition is Associated with Improved Outcomes in Newly Diagnosed Children with Luminal Crohn's disease.

Grover Z, Burgess C, Muir R, Reilly C, Lewindon PJ.

J Crohns Colitis. 2016 Oct;10(10):1159-64. doi: 10.1093/ecco-jcc/jjw075. Epub 2016 Mar 15.


Mitochondrial content is central to nuclear gene expression: Profound implications for human health.

Muir R, Diot A, Poulton J.

Bioessays. 2016 Feb;38(2):150-6. doi: 10.1002/bies.201500105. Epub 2016 Jan 3. Review.


Periodic Limb Movements and White Matter Hyperintensities in First-Ever Minor Stroke or High-Risk Transient Ischemic Attack.

Boulos MI, Murray BJ, Muir RT, Gao F, Szilagyi GM, Huroy M, Kiss A, Walters AS, Black SE, Lim AS, Swartz RH.

Sleep. 2017 Mar 1;40(3). doi: 10.1093/sleep/zsw080.


Reversible Reprogramming of Circulating Memory T Follicular Helper Cell Function during Chronic HIV Infection.

Cubas R, van Grevenynghe J, Wills S, Kardava L, Santich BH, Buckner CM, Muir R, Tardif V, Nichols C, Procopio F, He Z, Metcalf T, Ghneim K, Locci M, Ancuta P, Routy JP, Trautmann L, Li Y, McDermott AB, Koup RA, Petrovas C, Migueles SA, Connors M, Tomaras GD, Moir S, Crotty S, Haddad EK.

J Immunol. 2015 Dec 15;195(12):5625-36. doi: 10.4049/jimmunol.1501524. Epub 2015 Nov 6.


Modelling maternal obesity: the effects of a chronic high-fat, high-cholesterol diet on uterine expression of contractile-associated proteins and ex vivo contractile activity during labour in the rat.

Muir R, Ballan J, Clifford B, McMullen S, Khan R, Shmygol A, Quenby S, Elmes M.

Clin Sci (Lond). 2016 Feb;130(3):183-92. doi: 10.1042/CS20150539. Epub 2015 Nov 5.


Innate Lymphoid Cells Are the Predominant Source of IL-17A during the Early Pathogenesis of Acute Respiratory Distress Syndrome.

Muir R, Osbourn M, Dubois AV, Doran E, Small DM, Monahan A, O'Kane CM, McAllister K, Fitzgerald DC, Kissenpfennig A, McAuley DF, Ingram RJ.

Am J Respir Crit Care Med. 2016 Feb 15;193(4):407-16. doi: 10.1164/rccm.201410-1782OC.


Validity of Self-Report of Cardiovascular Risk Factors in a Population at High Risk for Stroke.

Dey AK, Alyass A, Muir RT, Black SE, Swartz RH, Murray BJ, Boulos MI.

J Stroke Cerebrovasc Dis. 2015 Dec;24(12):2860-5. doi: 10.1016/j.jstrokecerebrovasdis.2015.08.022. Epub 2015 Sep 26.


Trail Making Test Elucidates Neural Substrates of Specific Poststroke Executive Dysfunctions.

Muir RT, Lam B, Honjo K, Harry RD, McNeely AA, Gao FQ, Ramirez J, Scott CJ, Ganda A, Zhao J, Zhou XJ, Graham SJ, Rangwala N, Gibson E, Lobaugh NJ, Kiss A, Stuss DT, Nyenhuis DL, Lee BC, Kang Y, Black SE.

Stroke. 2015 Oct;46(10):2755-61. doi: 10.1161/STROKEAHA.115.009936. Epub 2015 Sep 17.


A novel quantitative assay of mitophagy: Combining high content fluorescence microscopy and mitochondrial DNA load to quantify mitophagy and identify novel pharmacological tools against pathogenic heteroplasmic mtDNA.

Diot A, Hinks-Roberts A, Lodge T, Liao C, Dombi E, Morten K, Brady S, Fratter C, Carver J, Muir R, Davis R, Green CJ, Johnston I, Hilton-Jones D, Sue C, Mortiboys H, Poulton J.

Pharmacol Res. 2015 Oct;100:24-35. doi: 10.1016/j.phrs.2015.07.014. Epub 2015 Jul 18.


Video-rate two-photon excited fluorescence lifetime imaging system with interleaved digitization.

Dow XY, Sullivan SZ, Muir RD, Simpson GJ.

Opt Lett. 2015 Jul 15;40(14):3296-9. doi: 10.1364/OL.40.003296.


Neuropsychological profiles of patients with juvenile myoclonic epilepsy and their siblings: An extended study.

Iqbal N, Caswell H, Muir R, Cadden A, Ferguson S, Mackenzie H, Watson P, Duncan S.

Epilepsia. 2015 Aug;56(8):1301-8. doi: 10.1111/epi.13061. Epub 2015 Jun 15.


Unexpected Role for Adaptive αβTh17 Cells in Acute Respiratory Distress Syndrome.

Li JT, Melton AC, Su G, Hamm DE, LaFemina M, Howard J, Fang X, Bhat S, Huynh KM, O'Kane CM, Ingram RJ, Muir RR, McAuley DF, Matthay MA, Sheppard D.

J Immunol. 2015 Jul 1;195(1):87-95. doi: 10.4049/jimmunol.1500054. Epub 2015 May 22.


Evaluation of exposure to airborne heavy metals at gun shooting ranges.

Lach K, Steer B, Gorbunov B, Mička V, Muir RB.

Ann Occup Hyg. 2015 Apr;59(3):307-23. doi: 10.1093/annhyg/meu097. Epub 2014 Dec 1.


High frame-rate multichannel beam-scanning microscopy based on Lissajous trajectories.

Sullivan SZ, Muir RD, Newman JA, Carlsen MS, Sreehari S, Doerge C, Begue NJ, Everly RM, Bouman CA, Simpson GJ.

Opt Express. 2014 Oct 6;22(20):24224-34. doi: 10.1364/OE.22.024224.


Linear fitting of multi-threshold counting data with a pixel-array detector for spectral X-ray imaging.

Muir RD, Pogranichney NR, Muir JL, Sullivan SZ, Battaile KP, Mulichak AM, Toth SJ, Keefe LJ, Simpson GJ.

J Synchrotron Radiat. 2014 Sep;21(Pt 5):1180-7. doi: 10.1107/S1600577514014167. Epub 2014 Aug 15.


Polarization-modulated second harmonic generation ellipsometric microscopy at video rate.

DeWalt EL, Sullivan SZ, Schmitt PD, Muir RD, Simpson GJ.

Anal Chem. 2014 Aug 19;86(16):8448-56. doi: 10.1021/ac502124v. Epub 2014 Jul 31.


Synchronous digitization for high dynamic range lock-in amplification in beam-scanning microscopy.

Muir RD, Sullivan SZ, Oglesbee RA, Simpson GJ.

Rev Sci Instrum. 2014 Mar;85(3):033703. doi: 10.1063/1.4865116.


Digital deconvolution filter derived from linear discriminant analysis and application for multiphoton fluorescence microscopy.

Sullivan SZ, Schmitt PD, Muir RD, DeWalt EL, Simpson GJ.

Anal Chem. 2014 Apr 1;86(7):3508-16. doi: 10.1021/ac404150d. Epub 2014 Mar 11.


Protocol for a double-blind randomised controlled trial of low dose intradermal grass pollen immunotherapy versus a histamine control on symptoms and medication use in adults with seasonal allergic rhinitis (PollenLITE).

Slovick A, Douiri A, Kelly J, Guerra A, Muir R, Tsioulos K, Murphy C, Shamji MH, Ying S, Durham SR, Till SJ.

Clin Transl Allergy. 2013 Aug 21;3(1):27. doi: 10.1186/2045-7022-3-27.


Conserving large populations of lions - the argument for fences has holes.

Creel S, Becker MS, Durant SM, M'Soka J, Matandiko W, Dickman AJ, Christianson D, Dröge E, Mweetwa T, Pettorelli N, Rosenblatt E, Schuette P, Woodroffe R, Bashir S, Beudels-Jamar RC, Blake S, Borner M, Breitenmoser C, Broekhuis F, Cozzi G, Davenport TR, Deutsch J, Dollar L, Dolrenry S, Douglas-Hamilton I, Fitzherbert E, Foley C, Hazzah L, Henschel P, Hilborn R, Hopcraft JG, Ikanda D, Jacobson A, Joubert B, Joubert D, Kelly MS, Lichtenfeld L, Mace GM, Milanzi J, Mitchell N, Msuha M, Muir R, Nyahongo J, Pimm S, Purchase G, Schenck C, Sillero-Zubiri C, Sinclair AR, Songorwa AN, Stanley-Price M, Tehou CA, Trout C, Wall J, Wittemyer G, Zimmermann A.

Ecol Lett. 2013 Nov;16(11):1413, e1-3. doi: 10.1111/ele.12145. Epub 2013 Jul 9.


Diabetes is predictive of longer hospital stay and increased rate of complications in spinal surgery in the UK.

Sharma A, Muir R, Johnston R, Carter E, Bowden G, Wilson-MacDonald J.

Ann R Coll Surg Engl. 2013 May;95(4):275-9. doi: 10.1308/003588413X13511609958299.


Exclusive enteral nutrition induces early clinical, mucosal and transmural remission in paediatric Crohn's disease.

Grover Z, Muir R, Lewindon P.

J Gastroenterol. 2014 Apr;49(4):638-45. doi: 10.1007/s00535-013-0815-0. Epub 2013 Apr 30.


Endogenous IL-21 regulates pathogenic mucosal CD4 T-cell responses during enhanced RSV disease in mice.

Dodd JS, Clark D, Muir R, Korpis C, Openshaw PJ.

Mucosal Immunol. 2013 Jul;6(4):704-17. doi: 10.1038/mi.2012.108. Epub 2012 Nov 21.


Soil biotransformation of thiodiglycol, the hydrolysis product of mustard gas: understanding the factors governing remediation of mustard gas contaminated soil.

Li H, Muir R, McFarlane NR, Soilleux RJ, Yu X, Thompson IP, Jackman SA.

Biodegradation. 2013 Feb;24(1):125-35. doi: 10.1007/s10532-012-9564-7. Epub 2012 Jul 1.


Statistical connection of binomial photon counting and photon averaging in high dynamic range beam-scanning microscopy.

Muir RD, Kissick DJ, Simpson GJ.

Opt Express. 2012 Apr 23;20(9):10406-15. doi: 10.1364/OE.20.010406.


The nature of innate and adaptive interleukin-17A responses in sham or bacterial inoculation.

Chong DL, Ingram RJ, Lowther DE, Muir R, Sriskandan S, Altmann DM.

Immunology. 2012 Jul;136(3):325-33. doi: 10.1111/j.1365-2567.2012.03584.x.


Mechanism of gallic acid biosynthesis in bacteria (Escherichia coli) and walnut (Juglans regia).

Muir RM, Ibáñez AM, Uratsu SL, Ingham ES, Leslie CA, McGranahan GH, Batra N, Goyal S, Joseph J, Jemmis ED, Dandekar AM.

Plant Mol Biol. 2011 Apr;75(6):555-65. doi: 10.1007/s11103-011-9739-3. Epub 2011 Jan 30.

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