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Items: 1 to 50 of 79

1.

Challenges in determining soil moisture and evaporation fluxes using distributed temperature sensing methods.

Lagos M, Serna JL, Muñoz JF, Suárez F.

J Environ Manage. 2020 May 1;261:110232. doi: 10.1016/j.jenvman.2020.110232. Epub 2020 Mar 2.

PMID:
32148302
2.

Comparison of clinical outcomes in STEMI patients treated with primary PCI according to day-time of medical attention and its relationship with circadian pattern.

Rodríguez-Arias JJ, Ortega-Paz L, Brugaletta S, Freixa X, Masotti M, Regueiro A, Ariza A, Carrillo X, Lidon RM, Garcia J, Cardenas M, Rojas SG, Muñoz JF, Zielonka M, Tizon-Marcos H, Sabaté M.

Int J Cardiol. 2020 Apr 15;305:35-41. doi: 10.1016/j.ijcard.2020.01.041. Epub 2020 Jan 21.

PMID:
32008846
3.

Human Blastomycosis in South Africa Caused by Blastomyces percursus and Blastomyces emzantsi sp. nov., 1967 to 2014.

Maphanga TG, Birkhead M, Muñoz JF, Allam M, Zulu TG, Cuomo CA, Schwartz IS, Ismail A, Naicker SD, Mpembe RS, Corcoran C, de Hoog S, Kenyon C, Borman AM, Frean JA, Govender NP.

J Clin Microbiol. 2020 Feb 24;58(3). pii: e01661-19. doi: 10.1128/JCM.01661-19. Print 2020 Feb 24.

PMID:
31896663
4.

Emergomyces: The global rise of new dimorphic fungal pathogens.

Schwartz IS, Govender NP, Sigler L, Jiang Y, Maphanga TG, Toplis B, Botha A, Dukik K, Hoving JC, Muñoz JF, de Hoog S, Cuomo CA, Colebunders R, Kenyon C.

PLoS Pathog. 2019 Sep 19;15(9):e1007977. doi: 10.1371/journal.ppat.1007977. eCollection 2019 Sep. Review. No abstract available.

5.

Identification of Candida auris by Use of the Updated Vitek 2 Yeast Identification System, Version 8.01: a Multilaboratory Evaluation Study.

Ambaraghassi G, Dufresne PJ, Dufresne SF, Vallières É, Muñoz JF, Cuomo CA, Berkow EL, Lockhart SR, Luong ML.

J Clin Microbiol. 2019 Oct 23;57(11). pii: e00884-19. doi: 10.1128/JCM.00884-19. Print 2019 Nov.

PMID:
31413079
6.

Association of KIR2DL2 gene with anti-cyclic citrullinated protein antibodies for serodiagnosis in rheumatoid arthritis.

Ramírez S, Ramírez MG, Muñoz JF, Martínez GE, Velarde EE, Sánchez PE.

Medicina (B Aires). 2019;79(3):161-166.

7.

Coordinated host-pathogen transcriptional dynamics revealed using sorted subpopulations and single macrophages infected with Candida albicans.

Muñoz JF, Delorey T, Ford CB, Li BY, Thompson DA, Rao RP, Cuomo CA.

Nat Commun. 2019 Apr 8;10(1):1607. doi: 10.1038/s41467-019-09599-8.

8.

Erratum for Kim et al., "Genetic Analysis of Candida auris Implicates Hsp90 in Morphogenesis and Azole Tolerance and Cdr1 in Azole Resistance".

Kim SH, Iyer KR, Pardeshi L, Muñoz JF, Robbins N, Cuomo CA, Wong KH, Cowen LE.

mBio. 2019 Mar 19;10(2). pii: e00346-19. doi: 10.1128/mBio.00346-19. No abstract available.

9.

Genetic Analysis of Candida auris Implicates Hsp90 in Morphogenesis and Azole Tolerance and Cdr1 in Azole Resistance.

Kim SH, Iyer KR, Pardeshi L, Muñoz JF, Robbins N, Cuomo CA, Wong KH, Cowen LE.

mBio. 2019 Jan 29;10(1). pii: e02529-18. doi: 10.1128/mBio.02529-18. Erratum in: mBio. 2019 Mar 19;10(2):.

10.

Genomic insights into multidrug-resistance, mating and virulence in Candida auris and related emerging species.

Muñoz JF, Gade L, Chow NA, Loparev VN, Juieng P, Berkow EL, Farrer RA, Litvintseva AP, Cuomo CA.

Nat Commun. 2018 Dec 17;9(1):5346. doi: 10.1038/s41467-018-07779-6.

11.

Poly- and Perfluoroalkyl Substances in Runoff Water and Wastewater Sampled at a Firefighter Training Area.

Dauchy X, Boiteux V, Colin A, Bach C, Rosin C, Munoz JF.

Arch Environ Contam Toxicol. 2019 Feb;76(2):206-215. doi: 10.1007/s00244-018-0585-z. Epub 2018 Dec 4.

PMID:
30515647
12.

Deep seepage of per- and polyfluoroalkyl substances through the soil of a firefighter training site and subsequent groundwater contamination.

Dauchy X, Boiteux V, Colin A, Hémard J, Bach C, Rosin C, Munoz JF.

Chemosphere. 2019 Jan;214:729-737. doi: 10.1016/j.chemosphere.2018.10.003. Epub 2018 Oct 2.

PMID:
30293026
13.

Pathways of Pathogenicity: Transcriptional Stages of Germination in the Fatal Fungal Pathogen Rhizopus delemar.

Sephton-Clark PCS, Muñoz JF, Ballou ER, Cuomo CA, Voelz K.

mSphere. 2018 Sep 26;3(5). pii: e00403-18. doi: 10.1128/mSphere.00403-18.

14.

Draft Genome Sequences of Two Sporothrix schenckii Clinical Isolates Associated with Human Sporotrichosis in Colombia.

Gomez OM, Alvarez LC, Muñoz JF, Misas E, Gallo JE, Jimenez MDP, Arango M, McEwen JG, Hernandez O, Clay OK.

Genome Announc. 2018 Jun 14;6(24). pii: e00495-18. doi: 10.1128/genomeA.00495-18.

15.

GROUT-CONCRETE INTERFACE BOND PERFORMANCE: EFFECT OF INTERFACE MOISTURE ON THE TENSILE BOND STRENGTH AND GROUT MICROSTRUCTURE.

De la Varga I, Muñoz JF, Bentz DP, Spragg RP, Stutzman PE, Graybeal BA.

Constr Build Mater. 2018 May;170:747-756. doi: 10.1016/j.conbuildmat.2018.03.076. Epub 2018 Mar 23.

16.

Genome analysis reveals evolutionary mechanisms of adaptation in systemic dimorphic fungi.

Muñoz JF, McEwen JG, Clay OK, Cuomo CA.

Sci Rep. 2018 Mar 14;8(1):4473. doi: 10.1038/s41598-018-22816-6.

17.

Influence of Substrate Moisture State and Roughness on Interface Microstructure and Bond Strength: Slant Shear vs. Pull-Off Testing.

Bentz DP, De la Varga I, Muñoz JF, Spragg RP, Graybeal BA, Hussey DS, Jacobson DL, Jones SZ, LaManna JM.

Cem Concr Compos. 2018 Mar;87:63-72. doi: 10.1016/j.cemconcomp.2017.12.005. Epub 2017 Dec 8.

18.

Per- and polyfluoroalkyl substances in firefighting foam concentrates and water samples collected near sites impacted by the use of these foams.

Dauchy X, Boiteux V, Bach C, Rosin C, Munoz JF.

Chemosphere. 2017 Sep;183:53-61. doi: 10.1016/j.chemosphere.2017.05.056. Epub 2017 May 13.

PMID:
28531559
19.

Oral Cyanocobalamin is Effective in the Treatment of Vitamin B12 Deficiency in Crohn's Disease.

Gomollón F, Gargallo CJ, Muñoz JF, Vicente R, Lue A, Mir A, García-Alvarado M, Gracia M, García-López S.

Nutrients. 2017 Mar 20;9(3). pii: E308. doi: 10.3390/nu9030308.

20.

Novel taxa of thermally dimorphic systemic pathogens in the Ajellomycetaceae (Onygenales).

Dukik K, Muñoz JF, Jiang Y, Feng P, Sigler L, Stielow JB, Freeke J, Jamalian A, Gerrits van den Ende B, McEwen JG, Clay OK, Schwartz IS, Govender NP, Maphanga TG, Cuomo CA, Moreno LF, Kenyon C, Borman AM, de Hoog S.

Mycoses. 2017 May;60(5):296-309. doi: 10.1111/myc.12601. Epub 2017 Feb 7.

21.

Concentrations and patterns of perfluoroalkyl and polyfluoroalkyl substances in a river and three drinking water treatment plants near and far from a major production source.

Boiteux V, Dauchy X, Bach C, Colin A, Hemard J, Sagres V, Rosin C, Munoz JF.

Sci Total Environ. 2017 Apr 1;583:393-400. doi: 10.1016/j.scitotenv.2017.01.079. Epub 2017 Jan 20.

PMID:
28117151
22.

Paracoccidioides spp. catalases and their role in antioxidant defense against host defense responses.

Tamayo D, Muñoz JF, Almeida AJ, Puerta JD, Restrepo Á, Cuomo CA, McEwen JG, Hernández O.

Fungal Genet Biol. 2017 Mar;100:22-32. doi: 10.1016/j.fgb.2017.01.005. Epub 2017 Jan 16.

23.

The impact of two fluoropolymer manufacturing facilities on downstream contamination of a river and drinking water resources with per- and polyfluoroalkyl substances.

Bach C, Dauchy X, Boiteux V, Colin A, Hemard J, Sagres V, Rosin C, Munoz JF.

Environ Sci Pollut Res Int. 2017 Feb;24(5):4916-4925. doi: 10.1007/s11356-016-8243-3. Epub 2016 Dec 17.

PMID:
27988902
24.

Mass flows and fate of per- and polyfluoroalkyl substances (PFASs) in the wastewater treatment plant of a fluorochemical manufacturing facility.

Dauchy X, Boiteux V, Bach C, Colin A, Hemard J, Rosin C, Munoz JF.

Sci Total Environ. 2017 Jan 15;576:549-558. doi: 10.1016/j.scitotenv.2016.10.130. Epub 2016 Oct 27.

PMID:
27810744
25.

Genome Diversity, Recombination, and Virulence across the Major Lineages of Paracoccidioides.

Muñoz JF, Farrer RA, Desjardins CA, Gallo JE, Sykes S, Sakthikumar S, Misas E, Whiston EA, Bagagli E, Soares CM, Teixeira MM, Taylor JW, Clay OK, McEwen JG, Cuomo CA.

mSphere. 2016 Sep 28;1(5). pii: e00213-16. eCollection 2016 Sep-Oct.

26.
27.

From NGS assembly challenges to instability of fungal mitochondrial genomes: A case study in genome complexity.

Misas E, Muñoz JF, Gallo JE, McEwen JG, Clay OK.

Comput Biol Chem. 2016 Apr;61:258-69. doi: 10.1016/j.compbiolchem.2016.02.016. Epub 2016 Feb 21.

PMID:
26970210
28.

Identification and Analysis of the Role of Superoxide Dismutases Isoforms in the Pathogenesis of Paracoccidioides spp.

Tamayo D, Muñoz JF, Lopez Á, Urán M, Herrera J, Borges CL, Restrepo Á, Soares CM, Taborda CP, Almeida AJ, McEwen JG, Hernández O.

PLoS Negl Trop Dis. 2016 Mar 10;10(3):e0004481. doi: 10.1371/journal.pntd.0004481. eCollection 2016 Mar.

29.

50 Years of Emmonsia Disease in Humans: The Dramatic Emergence of a Cluster of Novel Fungal Pathogens.

Schwartz IS, Kenyon C, Feng P, Govender NP, Dukik K, Sigler L, Jiang Y, Stielow JB, Muñoz JF, Cuomo CA, Botha A, Stchigel AM, de Hoog GS.

PLoS Pathog. 2015 Nov 19;11(11):e1005198. doi: 10.1371/journal.ppat.1005198. eCollection 2015. Review. No abstract available.

30.

Do constructed wetlands in grass strips reduce water contamination from drained fields?

Vallée R, Dousset S, Schott FX, Pallez C, Ortar A, Cherrier R, Munoz JF, Benoît M.

Environ Pollut. 2015 Dec;207:365-73. doi: 10.1016/j.envpol.2015.09.027. Epub 2015 Nov 2.

PMID:
26452003
31.

The Dynamic Genome and Transcriptome of the Human Fungal Pathogen Blastomyces and Close Relative Emmonsia.

Muñoz JF, Gauthier GM, Desjardins CA, Gallo JE, Holder J, Sullivan TD, Marty AJ, Carmen JC, Chen Z, Ding L, Gujja S, Magrini V, Misas E, Mitreva M, Priest M, Saif S, Whiston EA, Young S, Zeng Q, Goldman WE, Mardis ER, Taylor JW, McEwen JG, Clay OK, Klein BS, Cuomo CA.

PLoS Genet. 2015 Oct 6;11(10):e1005493. doi: 10.1371/journal.pgen.1005493. eCollection 2015 Oct.

32.

Genome update of the dimorphic human pathogenic fungi causing paracoccidioidomycosis.

Muñoz JF, Gallo JE, Misas E, Priest M, Imamovic A, Young S, Zeng Q, Clay OK, McEwen JG, Cuomo CA.

PLoS Negl Trop Dis. 2014 Dec 4;8(12):e3348. doi: 10.1371/journal.pntd.0003348. eCollection 2014 Dec.

33.

Occurrence, fate and behavior of parabens in aquatic environments: a review.

Haman C, Dauchy X, Rosin C, Munoz JF.

Water Res. 2015 Jan 1;68:1-11. Review.

PMID:
25462712
34.

The complex task of choosing a de novo assembly: lessons from fungal genomes.

Gallo JE, Muñoz JF, Misas E, McEwen JG, Clay OK.

Comput Biol Chem. 2014 Dec;53 Pt A:97-107. doi: 10.1016/j.compbiolchem.2014.08.014. Epub 2014 Aug 29.

PMID:
25262360
35.

Effect of sunlight exposure on the release of intentionally and/or non-intentionally added substances from polyethylene terephthalate (PET) bottles into water: chemical analysis and in vitro toxicity.

Bach C, Dauchy X, Severin I, Munoz JF, Etienne S, Chagnon MC.

Food Chem. 2014 Nov 1;162:63-71. doi: 10.1016/j.foodchem.2014.04.020. Epub 2014 Apr 13.

PMID:
24874358
36.

Occurrence of eight household micropollutants in urban wastewater and their fate in a wastewater treatment plant. Statistical evaluation.

Pasquini L, Munoz JF, Pons MN, Yvon J, Dauchy X, France X, Le ND, France-Lanord C, Görner T.

Sci Total Environ. 2014 May 15;481:459-68. doi: 10.1016/j.scitotenv.2014.02.075. Epub 2014 Mar 12.

PMID:
24631609
37.

Paracoccidioides brasiliensis PbP27 gene: knockdown procedures and functional characterization.

Torres I, Hernandez O, Tamayo D, Muñoz JF, García AM, Gómez BL, Restrepo A, McEwen JG.

FEMS Yeast Res. 2014 Mar;14(2):270-80. doi: 10.1111/1567-1364.12099. Epub 2013 Nov 1.

38.
39.

Is drinking water a major route of human exposure to alkylphenol and bisphenol contaminants in France?

Colin A, Bach C, Rosin C, Munoz JF, Dauchy X.

Arch Environ Contam Toxicol. 2014 Jan;66(1):86-99. doi: 10.1007/s00244-013-9942-0. Epub 2013 Aug 7.

PMID:
23921451
40.

Inhibition of PbGP43 expression may suggest that gp43 is a virulence factor in Paracoccidioides brasiliensis.

Torres I, Hernandez O, Tamayo D, Muñoz JF, Leitão NP Jr, García AM, Restrepo A, Puccia R, McEwen JG.

PLoS One. 2013 Jul 11;8(7):e68434. doi: 10.1371/journal.pone.0068434. Print 2013.

41.

Impact of certain household micropollutants on bacterial behavior. Toxicity tests/study of extracellular polymeric substances in sludge.

Pasquini L, Merlin C, Hassenboehler L, Munoz JF, Pons MN, Görner T.

Sci Total Environ. 2013 Oct 1;463-464:355-65. doi: 10.1016/j.scitotenv.2013.06.018. Epub 2013 Jul 2.

PMID:
23827359
42.

The eukaryotic genome, its reads, and the unfinished assembly.

Muñoz JF, Gallo JE, Misas E, McEwen JG, Clay OK.

FEBS Lett. 2013 Jul 11;587(14):2090-3. doi: 10.1016/j.febslet.2013.05.048. Epub 2013 May 30.

43.

Effect of temperature on the release of intentionally and non-intentionally added substances from polyethylene terephthalate (PET) bottles into water: chemical analysis and potential toxicity.

Bach C, Dauchy X, Severin I, Munoz JF, Etienne S, Chagnon MC.

Food Chem. 2013 Aug 15;139(1-4):672-80. doi: 10.1016/j.foodchem.2013.01.046. Epub 2013 Jan 29.

PMID:
23561160
44.

Simazine transport in undisturbed soils from a vineyard at the Casablanca valley, Chile.

Suárez F, Guzmán E, Muñoz JF, Bachmann J, Ortiz C, Alister C, Kogan M.

J Environ Manage. 2013 Mar 15;117:32-41. doi: 10.1016/j.jenvman.2012.12.026. Epub 2013 Jan 20.

PMID:
23339800
45.

Involvement of the 90 kDa heat shock protein during adaptation of Paracoccidioides brasiliensis to different environmental conditions.

Tamayo D, Muñoz JF, Torres I, Almeida AJ, Restrepo A, McEwen JG, Hernández O.

Fungal Genet Biol. 2013 Feb;51:34-41. doi: 10.1016/j.fgb.2012.11.005. Epub 2012 Dec 1.

PMID:
23207691
46.

Assessment of the bio-preparedness and of the training of the French hospital laboratories in the event of biological threat.

Merens A, Cavallo JD, Thibault F, Salicis F, Munoz JF, Courcol R, Binder P.

Euro Surveill. 2012 Nov 8;17(45). pii: 20312.

47.

Relationship between industrial discharges and contamination of raw water resources by perfluorinated compounds. Part I: Case study of a fluoropolymer manufacturing plant.

Dauchy X, Boiteux V, Rosin C, Munoz JF.

Bull Environ Contam Toxicol. 2012 Sep;89(3):525-30. doi: 10.1007/s00128-012-0704-x. Epub 2012 Jun 16.

PMID:
22706876
48.

Relationship between industrial discharges and contamination of raw water resources by perfluorinated compounds: part II: Case study of a fluorotelomer polymer manufacturing plant.

Dauchy X, Boiteux V, Rosin C, Munoz JF.

Bull Environ Contam Toxicol. 2012 Sep;89(3):531-6. doi: 10.1007/s00128-012-0705-9. Epub 2012 Jun 15.

PMID:
22699711
49.

False-negative tumor-free margins following mohs surgery for aggressive trichoblastoma.

Umbert P, Muñoz JF.

Am J Dermatopathol. 2012 May;34(3):255-8. doi: 10.1097/DAD.0b013e318213f80d.

PMID:
22513805
50.

National screening study on 10 perfluorinated compounds in raw and treated tap water in France.

Boiteux V, Dauchy X, Rosin C, Munoz JF.

Arch Environ Contam Toxicol. 2012 Jul;63(1):1-12. doi: 10.1007/s00244-012-9754-7. Epub 2012 Mar 9.

PMID:
22402780

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