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Items: 1 to 50 of 55

1.

Boost-HiC: Computational enhancement of long-range contacts in chromosomal contact maps.

Carron L, Morlot JB, Matthys V, Lesne A, Mozziconacci J.

Bioinformatics. 2019 Jan 4. doi: 10.1093/bioinformatics/bty1059. [Epub ahead of print]

PMID:
30615061
2.

High-salt-recovered sequences are associated with the active chromosomal compartment and with large ribonucleoprotein complexes including nuclear bodies.

Baudement MO, Cournac A, Court F, Seveno M, Parrinello H, Reynes C, Sabatier R, Bouschet T, Yi Z, Sallis S, Tancelin M, Rebouissou C, Cathala G, Lesne A, Mozziconacci J, Journot L, Forné T.

Genome Res. 2018 Nov;28(11):1733-1746. doi: 10.1101/gr.237073.118. Epub 2018 Oct 4.

PMID:
30287550
3.

Kinetic Signature of Cooperativity in the Irreversible Collapse of a Polymer.

Scolari VF, Mercy G, Koszul R, Lesne A, Mozziconacci J.

Phys Rev Lett. 2018 Aug 3;121(5):057801. doi: 10.1103/PhysRevLett.121.057801.

PMID:
30118310
4.

Characterizing meiotic chromosomes' structure and pairing using a designer sequence optimized for Hi-C.

Muller H, Scolari VF, Agier N, Piazza A, Thierry A, Mercy G, Descorps-Declere S, Lazar-Stefanita L, Espeli O, Llorente B, Fischer G, Mozziconacci J, Koszul R.

Mol Syst Biol. 2018 Jul 16;14(7):e8293. doi: 10.15252/msb.20188293.

5.

Multiscale Structuring of the E. coli Chromosome by Nucleoid-Associated and Condensin Proteins.

Lioy VS, Cournac A, Marbouty M, Duigou S, Mozziconacci J, Espéli O, Boccard F, Koszul R.

Cell. 2018 Feb 8;172(4):771-783.e18. doi: 10.1016/j.cell.2017.12.027. Epub 2018 Jan 18.

PMID:
29358050
6.

P-Body Purification Reveals the Condensation of Repressed mRNA Regulons.

Hubstenberger A, Courel M, Bénard M, Souquere S, Ernoult-Lange M, Chouaib R, Yi Z, Morlot JB, Munier A, Fradet M, Daunesse M, Bertrand E, Pierron G, Mozziconacci J, Kress M, Weil D.

Mol Cell. 2017 Oct 5;68(1):144-157.e5. doi: 10.1016/j.molcel.2017.09.003. Epub 2017 Sep 28.

7.

Cohesins and condensins orchestrate the 4D dynamics of yeast chromosomes during the cell cycle.

Lazar-Stefanita L, Scolari VF, Mercy G, Muller H, Guérin TM, Thierry A, Mozziconacci J, Koszul R.

EMBO J. 2017 Sep 15;36(18):2684-2697. doi: 10.15252/embj.201797342. Epub 2017 Jul 20.

8.

3D organization of synthetic and scrambled chromosomes.

Mercy G, Mozziconacci J, Scolari VF, Yang K, Zhao G, Thierry A, Luo Y, Mitchell LA, Shen M, Shen Y, Walker R, Zhang W, Wu Y, Xie ZX, Luo Z, Cai Y, Dai J, Yang H, Yuan YJ, Boeke JD, Bader JS, Muller H, Koszul R.

Science. 2017 Mar 10;355(6329). pii: eaaf4597. doi: 10.1126/science.aaf4597.

9.

The 3D folding of metazoan genomes correlates with the association of similar repetitive elements.

Cournac A, Koszul R, Mozziconacci J.

Nucleic Acids Res. 2016 Jan 8;44(1):245-55. doi: 10.1093/nar/gkv1292. Epub 2015 Nov 24.

10.

Generation and Analysis of Chromosomal Contact Maps of Yeast Species.

Cournac A, Marbouty M, Mozziconacci J, Koszul R.

Methods Mol Biol. 2016;1361:227-45. doi: 10.1007/978-1-4939-3079-1_13.

11.

Spatial reorganization of telomeres in long-lived quiescent cells.

Guidi M, Ruault M, Marbouty M, Loïodice I, Cournac A, Billaudeau C, Hocher A, Mozziconacci J, Koszul R, Taddei A.

Genome Biol. 2015 Sep 23;16:206. doi: 10.1186/s13059-015-0766-2.

12.

Condensin- and Replication-Mediated Bacterial Chromosome Folding and Origin Condensation Revealed by Hi-C and Super-resolution Imaging.

Marbouty M, Le Gall A, Cattoni DI, Cournac A, Koh A, Fiche JB, Mozziconacci J, Murray H, Koszul R, Nollmann M.

Mol Cell. 2015 Aug 20;59(4):588-602. doi: 10.1016/j.molcel.2015.07.020.

13.

Filling the gap: Micro-C accesses the nucleosomal fiber at 100-1000 bp resolution.

Mozziconacci J, Koszul R.

Genome Biol. 2015 Aug 21;16:169. doi: 10.1186/s13059-015-0744-8.

14.

Principles of chromatin organization in yeast: relevance of polymer models to describe nuclear organization and dynamics.

Wang R, Mozziconacci J, Bancaud A, Gadal O.

Curr Opin Cell Biol. 2015 Jun;34:54-60. doi: 10.1016/j.ceb.2015.04.004. Epub 2015 May 15. Review.

15.

Metagenomic chromosome conformation capture (meta3C) unveils the diversity of chromosome organization in microorganisms.

Marbouty M, Cournac A, Flot JF, Marie-Nelly H, Mozziconacci J, Koszul R.

Elife. 2014 Dec 17;3:e03318. doi: 10.7554/eLife.03318.

16.

The polymorphisms of the chromatin fiber.

Boulé JB, Mozziconacci J, Lavelle C.

J Phys Condens Matter. 2015 Jan 28;27(3):033101. doi: 10.1088/0953-8984/27/3/033101. Epub 2014 Dec 1. Review.

PMID:
25437138
17.

Improving docking results via reranking of ensembles of ligand poses in multiple X-ray protein conformations with MM-GBSA.

Greenidge PA, Kramer C, Mozziconacci JC, Sherman W.

J Chem Inf Model. 2014 Oct 27;54(10):2697-717. doi: 10.1021/ci5003735. Epub 2014 Sep 30.

PMID:
25266271
18.

3D genome reconstruction from chromosomal contacts.

Lesne A, Riposo J, Roger P, Cournac A, Mozziconacci J.

Nat Methods. 2014 Nov;11(11):1141-3. doi: 10.1038/nmeth.3104. Epub 2014 Sep 21.

PMID:
25240436
19.

On the topology of chromatin fibres.

Barbi M, Mozziconacci J, Victor JM, Wong H, Lavelle C.

Interface Focus. 2012 Oct 6;2(5):546-54. doi: 10.1098/rsfs.2011.0101. Epub 2012 Feb 1.

20.

High-throughput chromatin motion tracking in living yeast reveals the flexibility of the fiber throughout the genome.

Hajjoul H, Mathon J, Ranchon H, Goiffon I, Mozziconacci J, Albert B, Carrivain P, Victor JM, Gadal O, Bystricky K, Bancaud A.

Genome Res. 2013 Nov;23(11):1829-38. doi: 10.1101/gr.157008.113. Epub 2013 Sep 27.

21.

Systematic characterization of the conformation and dynamics of budding yeast chromosome XII.

Albert B, Mathon J, Shukla A, Saad H, Normand C, Léger-Silvestre I, Villa D, Kamgoue A, Mozziconacci J, Wong H, Zimmer C, Bhargava P, Bancaud A, Gadal O.

J Cell Biol. 2013 Jul 22;202(2):201-10. doi: 10.1083/jcb.201208186.

22.

MM/GBSA binding energy prediction on the PDBbind data set: successes, failures, and directions for further improvement.

Greenidge PA, Kramer C, Mozziconacci JC, Wolf RM.

J Chem Inf Model. 2013 Jan 28;53(1):201-9. doi: 10.1021/ci300425v. Epub 2012 Dec 27.

PMID:
23268595
23.

Pulling chromatin apart: Unstacking or Unwrapping?

Victor JM, Zlatanova J, Barbi M, Mozziconacci J.

BMC Biophys. 2012 Nov 27;5:21. doi: 10.1186/2046-1682-5-21.

24.

DNA topology in chromosomes: a quantitative survey and its physiological implications.

Barbi M, Mozziconacci J, Wong H, Victor JM.

J Math Biol. 2014 Jan;68(1-2):145-79. doi: 10.1007/s00285-012-0621-y. Epub 2012 Nov 20.

PMID:
23179130
25.

Normalization of a chromosomal contact map.

Cournac A, Marie-Nelly H, Marbouty M, Koszul R, Mozziconacci J.

BMC Genomics. 2012 Aug 30;13:436. doi: 10.1186/1471-2164-13-436.

26.

Nucleosome positioning and nucleosome stacking: two faces of the same coin.

Riposo J, Mozziconacci J.

Mol Biosyst. 2012 Apr;8(4):1172-8. doi: 10.1039/c2mb05407h. Epub 2012 Jan 23.

PMID:
22266567
27.

Co-transcriptional architecture in a Y loop in Drosophila melanogaster.

Redhouse JL, Mozziconacci J, White RA.

Chromosoma. 2011 Aug;120(4):399-407. doi: 10.1007/s00412-011-0321-1. Epub 2011 May 10.

PMID:
21556802
28.

Intra- and inter-chromosomal interactions correlate with CTCF binding genome wide.

Botta M, Haider S, Leung IX, Lio P, Mozziconacci J.

Mol Syst Biol. 2010 Nov 2;6:426. doi: 10.1038/msb.2010.79.

29.

[Patient dose: implementation of a clinical practice assessment in medical imaging].

Mozziconacci JG, Ayivi A, Bois Langlois F, Pucheux J.

J Radiol. 2009 Nov;90(11 Pt 1):1725-9. French.

PMID:
19953060
30.

Molecular crowding affects diffusion and binding of nuclear proteins in heterochromatin and reveals the fractal organization of chromatin.

Bancaud A, Huet S, Daigle N, Mozziconacci J, Beaudouin J, Ellenberg J.

EMBO J. 2009 Dec 16;28(24):3785-98. doi: 10.1038/emboj.2009.340.

31.
32.

Sequence-driven telomeric chromatin structure.

Revaud D, Mozziconacci J, Sabatier L, Desmaze C, Lavelle C.

Cell Cycle. 2009 Apr 1;8(7):1099-100. Epub 2009 Apr 4.

PMID:
19270515
33.

Tubulin dimers oligomerize before their incorporation into microtubules.

Mozziconacci J, Sandblad L, Wachsmuth M, Brunner D, Karsenti E.

PLoS One. 2008;3(11):e3821. doi: 10.1371/journal.pone.0003821. Epub 2008 Nov 27.

35.

Nucleosome chiral transition under positive torsional stress in single chromatin fibers.

Bancaud A, Wagner G, Conde E Silva N, Lavelle C, Wong H, Mozziconacci J, Barbi M, Sivolob A, Le Cam E, Mouawad L, Viovy JL, Victor JM, Prunell A.

Mol Cell. 2007 Jul 6;27(1):135-47.

36.

Structural plasticity of single chromatin fibers revealed by torsional manipulation.

Bancaud A, Conde e Silva N, Barbi M, Wagner G, Allemand JF, Mozziconacci J, Lavelle C, Croquette V, Victor JM, Prunell A, Viovy JL.

Nat Struct Mol Biol. 2006 May;13(5):444-50. Epub 2006 Apr 16.

PMID:
16622406
37.

A physical model for the condensation and decondensation of eukaryotic chromosomes.

Mozziconacci J, Lavelle C, Barbi M, Lesne A, Victor JM.

FEBS Lett. 2006 Jan 23;580(2):368-72. Epub 2005 Dec 27.

38.

[Place of the radiation safety officer in the implementation of the ALARA principle through European directive 97-43 items].

Mozziconacci JG, Ayivi J, Loat A, Ifergan J, Mourbrun M, Drevet B.

J Radiol. 2005 May;86(5 Pt 1):455-60. French.

PMID:
16114200
39.

How the chromatin fiber deals with topological constraints.

Barbi M, Mozziconacci J, Victor JM.

Phys Rev E Stat Nonlin Soft Matter Phys. 2005 Mar;71(3 Pt 1):031910. Epub 2005 Mar 23.

PMID:
15903462
40.

Optimization and validation of a docking-scoring protocol; application to virtual screening for COX-2 inhibitors.

Mozziconacci JC, Arnoult E, Bernard P, Do QT, Marot C, Morin-Allory L.

J Med Chem. 2005 Feb 24;48(4):1055-68.

PMID:
15715473
41.

[A case of renocolic fistula complicating xanthogranulomatous pyelonephritis treated by laparoscopy].

Bachelier MN, Carteron M, Gazaigne J, Mornet M, Mozziconacci JG, Ntarundenga U.

Prog Urol. 2004 Feb;14(1):67-9. French.

PMID:
15098757
42.

2D QSAR consensus prediction for high-throughput virtual screening. An application to COX-2 inhibition modeling and screening of the NCI database.

Baurin N, Mozziconacci JC, Arnoult E, Chavatte P, Marot C, Morin-Allory L.

J Chem Inf Comput Sci. 2004 Jan-Feb;44(1):276-85.

PMID:
14741037
43.

Nucleosome gaping supports a functional structure for the 30nm chromatin fiber.

Mozziconacci J, Victor JM.

J Struct Biol. 2003 Jul;143(1):72-6.

PMID:
12892727
44.

[Transcaval ureter].

Gazaigne J, Alkhouja AS, Sebe P, Mozziconacci JG.

Prog Urol. 2002 Jun;12(3):486-9. French.

PMID:
12189763
45.

AML1-MTG16 fusion gene in therapy-related acute leukemia with t(16;21)(q24;q22): two new cases.

Salomon-Nguyen F, Busson-Le Coniat M, Lafage Pochitaloff M, Mozziconacci J, Berger R, Bernard OA.

Leukemia. 2000 Sep;14(9):1704-5. No abstract available.

PMID:
10995019
46.

[Sarcomatoid carcinoma of the bladder with major osseous metaplasia].

Gazaigne J, Mozziconacci JG, Provendier B, Sebe P.

Prog Urol. 1998 Dec;8(6):1051-3. French.

PMID:
9894268
47.

[Pseudotumoral xanthogranulomatous pyelonephritis. A propos of 2 cases].

Mozziconacci JG, Gazaigne J, Labussière AS, Boisserie P.

J Radiol. 1996 Jul;77(7):503-8. Review. French.

PMID:
8760618
48.

Epididymal and renal sarcoidosis.

Gazaigne J, Mozziconacci JG, Mornet M, Provendier B.

Br J Urol. 1995 Mar;75(3):413-4. No abstract available.

PMID:
7735814
49.

[Ureteral stenosis caused by pelvic actinomycosis].

Gazaigne J, Mornet M, Mozziconacci JG, Portal B, Provendier B.

J Urol (Paris). 1994;100(2):109-12. French.

PMID:
7995966
50.

[Colonic adenocarcinoma after Coffey's operation. A case].

Gazaigne J, Mozziconacci JG, Chebrou DM, Ntarudenga U.

J Urol (Paris). 1993;99(3):146-9. French.

PMID:
7745273

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