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Items: 1 to 50 of 88

1.

Two lineages of kingfisher feather lice exhibit differing degrees of cospeciation with their hosts.

Catanach TA, Johnson KP, Marks BD, Moyle RG, Valim MP, Weckstein JD.

Parasitology. 2019 Jul;146(8):1083-1095. doi: 10.1017/S0031182019000453. Epub 2019 May 3.

PMID:
31046855
2.

Earth history and the passerine superradiation.

Oliveros CH, Field DJ, Ksepka DT, Barker FK, Aleixo A, Andersen MJ, Alström P, Benz BW, Braun EL, Braun MJ, Bravo GA, Brumfield RT, Chesser RT, Claramunt S, Cracraft J, Cuervo AM, Derryberry EP, Glenn TC, Harvey MG, Hosner PA, Joseph L, Kimball RT, Mack AL, Miskelly CM, Peterson AT, Robbins MB, Sheldon FH, Silveira LF, Smith BT, White ND, Moyle RG, Faircloth BC.

Proc Natl Acad Sci U S A. 2019 Apr 16;116(16):7916-7925. doi: 10.1073/pnas.1813206116. Epub 2019 Apr 1.

3.

Near-complete phylogeny and taxonomic revision of the world's babblers (Aves: Passeriformes).

Cai T, Cibois A, Alström P, Moyle RG, Kennedy JD, Shao S, Zhang R, Irestedt M, Ericson PGP, Gelang M, Qu Y, Lei F, Fjeldså J.

Mol Phylogenet Evol. 2019 Jan;130:346-356. doi: 10.1016/j.ympev.2018.10.010. Epub 2018 Oct 12.

PMID:
30321696
4.

Multiple and Independent Phases of Transposable Element Amplification in the Genomes of Piciformes (Woodpeckers and Allies).

Manthey JD, Moyle RG, Boissinot S.

Genome Biol Evol. 2018 Jun 1;10(6):1445-1456. doi: 10.1093/gbe/evy105.

5.

Comprehensive molecular phylogeny of the grassbirds and allies (Locustellidae) reveals extensive non-monophyly of traditional genera, and a proposal for a new classification.

Alström P, Cibois A, Irestedt M, Zuccon D, Gelang M, Fjeldså J, Andersen MJ, Moyle RG, Pasquet E, Olsson U.

Mol Phylogenet Evol. 2018 Oct;127:367-375. doi: 10.1016/j.ympev.2018.03.029. Epub 2018 Apr 3.

PMID:
29625229
6.

Analysis of the Complete Genome Sequence of Cucumber mosaic virus Strain K.

Moyle R, Pretorius LS, Shuey LS, Nowak E, Schenk PM.

Genome Announc. 2018 Feb 15;6(7). pii: e00053-18. doi: 10.1128/genomeA.00053-18.

7.

Genomic data resolve gene tree discordance in spiderhunters (Nectariniidae, Arachnothera).

Campillo LC, Oliveros CH, Sheldon FH, Moyle RG.

Mol Phylogenet Evol. 2018 Mar;120:151-157. doi: 10.1016/j.ympev.2017.12.011. Epub 2017 Dec 11.

PMID:
29242166
8.

Complete Nucleotide Sequence of Australian Tomato spotted wilt virus Isolate TSWV-QLD2.

Moyle RL, Pretorius L, Carvalhais LC, Schenk PM.

Genome Announc. 2017 Nov 22;5(47). pii: e01267-17. doi: 10.1128/genomeA.01267-17.

9.

An Optimized Transient Dual Luciferase Assay for Quantifying MicroRNA Directed Repression of Targeted Sequences.

Moyle RL, Carvalhais LC, Pretorius LS, Nowak E, Subramaniam G, Dalton-Morgan J, Schenk PM.

Front Plant Sci. 2017 Sep 20;8:1631. doi: 10.3389/fpls.2017.01631. eCollection 2017.

10.

Evolutionary and ecological forces influencing population diversification in Bornean montane passerines.

Chua VL, Smith BT, Burner RC, Rahman MA, Lakim M, Prawiradilaga DM, Moyle RG, Sheldon FH.

Mol Phylogenet Evol. 2017 Aug;113:139-149. doi: 10.1016/j.ympev.2017.05.016. Epub 2017 May 22.

PMID:
28545973
11.

A genome-wide assessment of stages of elevational parapatry in Bornean passerine birds reveals no introgression: implications for processes and patterns of speciation.

Moyle RG, Manthey JD, Hosner PA, Rahman M, Lakim M, Sheldon FH.

PeerJ. 2017 May 18;5:e3335. doi: 10.7717/peerj.3335. eCollection 2017.

12.

Complete Nucleotide Sequence of an Australian Isolate of Turnip mosaic virus before and after Seven Years of Serial Passaging.

Pretorius L, Moyle RL, Dalton-Morgan J, Hussein N, Schenk PM.

Genome Announc. 2016 Nov 17;4(6). pii: e01269-16. doi: 10.1128/genomeA.01269-16.

13.

Tectonic collision and uplift of Wallacea triggered the global songbird radiation.

Moyle RG, Oliveros CH, Andersen MJ, Hosner PA, Benz BW, Manthey JD, Travers SL, Brown RM, Faircloth BC.

Nat Commun. 2016 Aug 30;7:12709. doi: 10.1038/ncomms12709.

14.

Mutations in different pigmentation genes are associated with parallel melanism in island flycatchers.

Uy JA, Cooper EA, Cutie S, Concannon MR, Poelstra JW, Moyle RG, Filardi CE.

Proc Biol Sci. 2016 Jul 13;283(1834). pii: 20160731. doi: 10.1098/rspb.2016.0731.

15.

Comparison of Target-Capture and Restriction-Site Associated DNA Sequencing for Phylogenomics: A Test in Cardinalid Tanagers (Aves, Genus: Piranga).

Manthey JD, Campillo LC, Burns KJ, Moyle RG.

Syst Biol. 2016 Jul;65(4):640-50. doi: 10.1093/sysbio/syw005. Epub 2016 Jan 28.

16.

A genomic investigation of the putative contact zone between divergent Brown Creeper (Certhia americana) lineages: chromosomal patterns of genetic differentiation.

Manthey JD, Robbins MB, Moyle RG.

Genome. 2016 Feb;59(2):115-25. doi: 10.1139/gen-2015-0093. Epub 2015 Nov 20.

PMID:
26794151
17.

Genetic Differentiation in Insular Lowland Rainforests: Insights from Historical Demographic Patterns in Philippine Birds.

Sánchez-González LA, Hosner PA, Moyle RG.

PLoS One. 2015 Aug 27;10(8):e0134284. doi: 10.1371/journal.pone.0134284. eCollection 2015.

18.

Rapid diversification and secondary sympatry in Australo-Pacific kingfishers (Aves: Alcedinidae: Todiramphus).

Andersen MJ, Shult HT, Cibois A, Thibault JC, Filardi CE, Moyle RG.

R Soc Open Sci. 2015 Feb 4;2(2):140375. doi: 10.1098/rsos.140375. eCollection 2015 Feb.

19.

Isolation by environment in White-breasted Nuthatches (Sitta carolinensis) of the Madrean Archipelago sky islands: a landscape genomics approach.

Manthey JD, Moyle RG.

Mol Ecol. 2015 Jul;24(14):3628-38. doi: 10.1111/mec.13258. Epub 2015 Jul 2.

PMID:
26037653
20.

Training for cleanliness.

Moyle R.

JEMS. 2014 Oct;39(10):14. No abstract available.

PMID:
25632499
21.

Phylogeny of the monarch flycatchers reveals extensive paraphyly and novel relationships within a major Australo-Pacific radiation.

Andersen MJ, Hosner PA, Filardi CE, Moyle RG.

Mol Phylogenet Evol. 2015 Feb;83:118-36. doi: 10.1016/j.ympev.2014.11.010. Epub 2014 Nov 22.

PMID:
25463752
22.

Untangling taxonomic confusion and diversification patterns of the Streak-breasted Scimitar Babblers (Timaliidae: Pomatorhinus ruficollis complex) in southern Asia.

Reddy S, Sharief S, Yohe LR, Witkowski J, Hosner PA, Nyári ÁS, Moyle RG.

Mol Phylogenet Evol. 2015 Jan;82 Pt A:183-92. doi: 10.1016/j.ympev.2014.10.013. Epub 2014 Oct 27.

PMID:
25450499
23.

Phylogeny and biogeography of Ficedula flycatchers (Aves: Muscicapidae): novel results from fresh source material.

Moyle RG, Hosner PA, Jones AW, Outlaw DC.

Mol Phylogenet Evol. 2015 Jan;82 Pt A:87-94. doi: 10.1016/j.ympev.2014.09.029. Epub 2014 Oct 13.

PMID:
25307119
24.

The pineapple AcMADS1 promoter confers high level expression in tomato and Arabidopsis flowering and fruiting tissues, but AcMADS1 does not complement the tomato LeMADS-RIN (rin) mutant.

Moyle RL, Koia JH, Vrebalov J, Giovannoni J, Botella JR.

Plant Mol Biol. 2014 Nov;86(4-5):395-407. doi: 10.1007/s11103-014-0236-3. Epub 2014 Aug 20.

PMID:
25139231
25.

Climate-driven diversification and Pleistocene refugia in Philippine birds: evidence from phylogeographic structure and paleoenvironmental niche modeling.

Hosner PA, Sánchez-González LA, Peterson AT, Moyle RG.

Evolution. 2014 Sep;68(9):2658-74. doi: 10.1111/evo.12459. Epub 2014 Jul 10.

PMID:
24890129
26.
27.

A molecular phylogeny of Pacific honeyeaters (Aves: Meliphagidae) reveals extensive paraphyly and an isolated Polynesian radiation.

Andersen MJ, Naikatini A, Moyle RG.

Mol Phylogenet Evol. 2014 Feb;71:308-15. doi: 10.1016/j.ympev.2013.11.014. Epub 2013 Dec 6.

PMID:
24315868
28.

Diversity of sequences and expression patterns among alleles of a sugarcane loading stem gene.

Moyle RL, Birch RG.

Theor Appl Genet. 2013 Jul;126(7):1775-82. doi: 10.1007/s00122-013-2091-z. Epub 2013 Apr 2.

PMID:
23546592
29.

Sugarcane Loading Stem Gene promoters drive transgene expression preferentially in the stem.

Moyle RL, Birch RG.

Plant Mol Biol. 2013 May;82(1-2):51-8. doi: 10.1007/s11103-013-0034-3. Epub 2013 Mar 12.

PMID:
23479084
30.

Mature-stem expression of a silencing-resistant sucrose isomerase gene drives isomaltulose accumulation to high levels in sugarcane.

Mudge SR, Basnayake SW, Moyle RL, Osabe K, Graham MW, Morgan TE, Birch RG.

Plant Biotechnol J. 2013 May;11(4):502-9. doi: 10.1111/pbi.12038. Epub 2013 Jan 9.

31.

Pineapple translation factor SUI1 and ribosomal protein L36 promoters drive constitutive transgene expression patterns in Arabidopsis thaliana.

Koia J, Moyle R, Hendry C, Lim L, Botella JR.

Plant Mol Biol. 2013 Mar;81(4-5):327-36. doi: 10.1007/s11103-012-0002-3. Epub 2012 Dec 22.

PMID:
23263857
32.

Microarray analysis of gene expression profiles in ripening pineapple fruits.

Koia JH, Moyle RL, Botella JR.

BMC Plant Biol. 2012 Dec 18;12:240. doi: 10.1186/1471-2229-12-240.

33.

A reconsideration of Gallicolumba (Aves: Columbidae) relationships using fresh source material reveals pseudogenes, chimeras, and a novel phylogenetic hypothesis.

Moyle RG, Jones RM, Andersen MJ.

Mol Phylogenet Evol. 2013 Mar;66(3):1060-6. doi: 10.1016/j.ympev.2012.11.024. Epub 2012 Dec 6.

PMID:
23220516
34.

The phylogenetic position of some Philippine "babblers" spans the muscicapoid and sylvioid bird radiations.

Oliveros CH, Reddy S, Moyle RG.

Mol Phylogenet Evol. 2012 Nov;65(2):799-804. doi: 10.1016/j.ympev.2012.07.029. Epub 2012 Aug 2.

PMID:
22877643
35.

Molecular phylogeny and insular biogeography of the lowland tailorbirds of Southeast Asia (Cisticolidae: Orthotomus).

Sheldon FH, Oliveros CH, Taylor SS, McKay B, Lim HC, Abdul Rahman M, Mays H, Moyle RG.

Mol Phylogenet Evol. 2012 Oct;65(1):54-63. doi: 10.1016/j.ympev.2012.05.023. Epub 2012 Jun 9.

PMID:
22687636
36.

Phylogeny and biogeography of the core babblers (Aves: Timaliidae).

Moyle RG, Andersen MJ, Oliveros CH, Steinheimer FD, Reddy S.

Syst Biol. 2012 Jul;61(4):631-51. doi: 10.1093/sysbio/sys027. Epub 2012 Feb 10.

PMID:
22328569
37.

Molecular systematics and species limits in the Philippine fantails (Aves: Rhipidura).

Sánchez-González LA, Moyle RG.

Mol Phylogenet Evol. 2011 Nov;61(2):290-9. doi: 10.1016/j.ympev.2011.06.013. Epub 2011 Jun 22.

PMID:
21722744
38.

Embryogenic callus proliferation and regeneration conditions for genetic transformation of diverse sugarcane cultivars.

Basnayake SW, Moyle R, Birch RG.

Plant Cell Rep. 2011 Mar;30(3):439-48. doi: 10.1007/s00299-010-0927-4. Epub 2010 Oct 27.

PMID:
20978767
39.

Phylogeny and biogeography of the Asian trogons (Aves: Trogoniformes) inferred from nuclear and mitochondrial DNA sequences.

Hosner PA, Sheldon FH, Lim HC, Moyle RG.

Mol Phylogenet Evol. 2010 Dec;57(3):1219-25. doi: 10.1016/j.ympev.2010.09.008. Epub 2010 Sep 19.

PMID:
20858547
40.

Revisiting Wallace's haunt: coalescent simulations and comparative niche modeling reveal historical mechanisms that promoted avian population divergence in the Malay Archipelago.

Lim HC, Rahman MA, Lim SL, Moyle RG, Sheldon FH.

Evolution. 2011 Feb;65(2):321-34. doi: 10.1111/j.1558-5646.2010.01105.x. Epub 2010 Sep 29.

PMID:
20796023
41.

Origin and diversification of Philippine bulbuls.

Oliveros CH, Moyle RG.

Mol Phylogenet Evol. 2010 Mar;54(3):822-32. doi: 10.1016/j.ympev.2009.12.001. Epub 2009 Dec 6.

PMID:
19995611
42.

Phylogenetic relationships of flowerpeckers (Aves: Dicaeidae): novel insights into the evolution of a tropical passerine clade.

Nyári AS, Peterson AT, Rice NH, Moyle RG.

Mol Phylogenet Evol. 2009 Dec;53(3):613-9. doi: 10.1016/j.ympev.2009.06.014. Epub 2009 Jul 2.

PMID:
19576993
43.
44.

Explosive Pleistocene diversification and hemispheric expansion of a "great speciator".

Moyle RG, Filardi CE, Smith CE, Diamond J.

Proc Natl Acad Sci U S A. 2009 Feb 10;106(6):1863-8. doi: 10.1073/pnas.0809861105. Epub 2009 Jan 30.

45.

Clarifying the systematics of an enigmatic avian lineage: what is a bombycillid?

Spellman GM, Cibois A, Moyle RG, Winker K, Keith Barker F.

Mol Phylogenet Evol. 2008 Dec;49(3):1036-40. doi: 10.1016/j.ympev.2008.09.006. Epub 2008 Sep 18. No abstract available.

46.

Plumage and song differences mediate species recognition between incipient flycatcher species of the Solomon Islands.

Uy JA, Moyle RG, Filardi CE.

Evolution. 2009 Jan;63(1):153-64. doi: 10.1111/j.1558-5646.2008.00530.x. Epub 2008 Sep 18.

PMID:
18803681
47.

The need for proper vouchering in phylogenetic studies of birds.

Peterson AT, Moyle RG, Nyári AS, Robbins MB, Brumfield RT, Remsen JV Jr.

Mol Phylogenet Evol. 2007 Dec;45(3):1042-4. Epub 2007 Sep 18. No abstract available.

PMID:
17962047
48.

Reproduction in male swamp wallabies (Wallabia bicolor): puberty and the effects of season.

Paplinska JZ, Moyle RL, Wreford NG, Temple-Smith PD, Renfree MB.

J Anat. 2007 Oct;211(4):518-33. Epub 2007 Aug 31.

49.

Molecular phylogenetics of the bee-eaters (Aves: Meropidae) based on nuclear and mitochondrial DNA sequence data.

Marks BD, Weckstein JD, Moyle RG.

Mol Phylogenet Evol. 2007 Oct;45(1):23-32. Epub 2007 Jul 18.

PMID:
17716922
50.

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