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Items: 1 to 50 of 108

1.

Double-negative (CD27-IgD-) B cells are expanded in NSCLC and inversely correlate with affinity-matured B cell populations.

Centuori SM, Gomes CJ, Kim SS, Putnam CW, Larsen BT, Garland LL, Mount DW, Martinez JD.

J Transl Med. 2018 Feb 15;16(1):30. doi: 10.1186/s12967-018-1404-z.

2.

Using logistic regression to improve the prognostic value of microarray gene expression data sets: application to early-stage squamous cell carcinoma of the lung and triple negative breast carcinoma.

Mount DW, Putnam CW, Centouri SM, Manziello AM, Pandey R, Garland LL, Martinez JD.

BMC Med Genomics. 2014 Jun 10;7:33. doi: 10.1186/1755-8794-7-33.

3.

Alisertib added to rituximab and vincristine is synthetic lethal and potentially curative in mice with aggressive DLBCL co-overexpressing MYC and BCL2.

Mahadevan D, Morales C, Cooke LS, Manziello A, Mount DW, Persky DO, Fisher RI, Miller TP, Qi W.

PLoS One. 2014 Jun 3;9(6):e95184. doi: 10.1371/journal.pone.0095184. eCollection 2014.

4.

Comparative study of the neurotrophic effects elicited by VEGF-B and GDNF in preclinical in vivo models of Parkinson's disease.

Yue X, Hariri DJ, Caballero B, Zhang S, Bartlett MJ, Kaut O, Mount DW, Wüllner U, Sherman SJ, Falk T.

Neuroscience. 2014 Jan 31;258:385-400. doi: 10.1016/j.neuroscience.2013.11.038. Epub 2013 Nov 27.

5.

In Vitro Assessment of the Inflammatory Breast Cancer Cell Line SUM 149: Discovery of 2 Single Nucleotide Polymorphisms in the RNase L Gene.

Nokes BT, Cunliffe HE, Lafleur B, Mount DW, Livingston RB, Futscher BW, Lang JE.

J Cancer. 2013;4(2):104-16. doi: 10.7150/jca.5002. Epub 2013 Jan 10.

6.

Using multiple sequence alignment editors and formatters.

Mount DW.

Cold Spring Harb Protoc. 2009 Jul;2009(7):pdb.top45. doi: 10.1101/pdb.top45.

PMID:
20147226
7.

Using iterative methods for global multiple sequence alignment.

Mount DW.

Cold Spring Harb Protoc. 2009 Jul;2009(7):pdb.top44. doi: 10.1101/pdb.top44.

PMID:
20147225
8.

Using progressive methods for global multiple sequence alignment.

Mount DW.

Cold Spring Harb Protoc. 2009 Jul;2009(7):pdb.top43. doi: 10.1101/pdb.top43.

PMID:
20147224
9.

Using hidden Markov models to align multiple sequences.

Mount DW.

Cold Spring Harb Protoc. 2009 Jul;2009(7):pdb.top41. doi: 10.1101/pdb.top41.

PMID:
20147223
10.

Comparing programs and methods to use for global multiple sequence alignment.

Mount DW.

Cold Spring Harb Protoc. 2009 Jul;2009(7):pdb.ip61. doi: 10.1101/pdb.ip61.

PMID:
20147201
11.

Using gaps and gap penalties to optimize pairwise sequence alignments.

Mount DW.

CSH Protoc. 2008 Jun 1;2008:pdb.top40. doi: 10.1101/pdb.top40.

PMID:
21356856
12.

Using BLOSUM in Sequence Alignments.

Mount DW.

CSH Protoc. 2008 Jun 1;2008:pdb.top39. doi: 10.1101/pdb.top39.

PMID:
21356855
13.

Using PAM Matrices in Sequence Alignments.

Mount DW.

CSH Protoc. 2008 Jun 1;2008:pdb.top38. doi: 10.1101/pdb.top38.

PMID:
21356854
14.

Studies of varying alignment algorithm, amino Acid scoring matrix, and gap penalties.

Mount DW.

CSH Protoc. 2008 Jun 1;2008:pdb.ip60. doi: 10.1101/pdb.ip60.

PMID:
21356841
15.

Comparison of the PAM and BLOSUM Amino Acid Substitution Matrices.

Mount DW.

CSH Protoc. 2008 Jun 1;2008:pdb.ip59. doi: 10.1101/pdb.ip59.

PMID:
21356840
16.

A test of the markov model of evolution in proteins.

Mount DW.

CSH Protoc. 2008 Jun 1;2008:pdb.ip58. doi: 10.1101/pdb.ip58.

PMID:
21356839
17.

The maximum likelihood approach for phylogenetic prediction.

Mount DW.

CSH Protoc. 2008 Apr 1;2008:pdb.top34. doi: 10.1101/pdb.top34.

PMID:
21356817
18.

Distance methods for phylogenetic prediction.

Mount DW.

CSH Protoc. 2008 Apr 1;2008:pdb.top33. doi: 10.1101/pdb.top33.

PMID:
21356816
19.

Maximum parsimony method for phylogenetic prediction.

Mount DW.

CSH Protoc. 2008 Apr 1;2008:pdb.top32. doi: 10.1101/pdb.top32.

PMID:
21356815
20.

Choosing a method for phylogenetic prediction.

Mount DW.

CSH Protoc. 2008 Apr 1;2008:pdb.ip49. doi: 10.1101/pdb.ip49.

PMID:
21356800
21.

Using the Basic Local Alignment Search Tool (BLAST).

Mount DW.

CSH Protoc. 2007 Jul 1;2007:pdb.top17. doi: 10.1101/pdb.top17.

PMID:
21357135
22.

Using a FASTA Sequence Database Similarity Search.

Mount DW.

CSH Protoc. 2007 Jul 1;2007:pdb.top16. doi: 10.1101/pdb.top16.

PMID:
21357134
23.

Strategies for sequence similarity database searches.

Mount DW.

CSH Protoc. 2007 Jul 1;2007:pdb.top15. doi: 10.1101/pdb.top15.

PMID:
21357133
24.

Steps Used by the BLAST Algorithm.

Mount DW.

CSH Protoc. 2007 Jul 1;2007:pdb.ip41. doi: 10.1101/pdb.ip41.

PMID:
21357114
25.

Recommended Steps for a FASTA Search.

Mount DW.

CSH Protoc. 2007 Jul 1;2007:pdb.ip40. doi: 10.1101/pdb.ip40.

PMID:
21357113
26.

Dot matrix pairwise sequence comparison.

Mount DW.

CSH Protoc. 2007 Dec 1;2007:pdb.top31. doi: 10.1101/pdb.top31.

PMID:
21357006
27.

Human laminin-5 and laminin-10 mediated gene expression of prostate carcinoma cells.

Calaluce R, Beck SK, Bair EL, Pandey R, Greer KA, Hoying AM, Hoying JB, Mount DW, Nagle RB.

Prostate. 2006 Sep 15;66(13):1381-90.

PMID:
16804886
28.

Using bioinformatics and genome analysis for new therapeutic interventions.

Mount DW, Pandey R.

Mol Cancer Ther. 2005 Oct;4(10):1636-43. Review.

29.
30.

Modern data security.

Klein RR 3rd, Mount DW, Nagle RB.

Arch Pathol Lab Med. 2004 Mar;128(3):338-40. No abstract available.

PMID:
14987149
31.

Androgen regulation of the human FERM domain encoding gene EHM2 in a cell model of steroid-induced differentiation.

Chauhan S, Pandey R, Way JF, Sroka TC, Demetriou MC, Kunz S, Cress AE, Mount DW, Miesfeld RL.

Biochem Biophys Res Commun. 2003 Oct 17;310(2):421-32.

32.

Arabidopsis UVH6, a homolog of human XPD and yeast RAD3 DNA repair genes, functions in DNA repair and is essential for plant growth.

Liu Z, Hong SW, Escobar M, Vierling E, Mitchell DL, Mount DW, Hall JD.

Plant Physiol. 2003 Jul;132(3):1405-14.

33.

Analysis of histone acetyltransferase and histone deacetylase families of Arabidopsis thaliana suggests functional diversification of chromatin modification among multicellular eukaryotes.

Pandey R, Müller A, Napoli CA, Selinger DA, Pikaard CS, Richards EJ, Bender J, Mount DW, Jorgensen RA.

Nucleic Acids Res. 2002 Dec 1;30(23):5036-55.

34.
35.
37.

DNA repair. Reprogramming transcription.

Mount DW.

Nature. 1996 Oct 31;383(6603):763-4. No abstract available.

PMID:
8892996
38.

Arabidopsis mutants deficient in T-DNA integration.

Sonti RV, Chiurazzi M, Wong D, Davies CS, Harlow GR, Mount DW, Signer ER.

Proc Natl Acad Sci U S A. 1995 Dec 5;92(25):11786-90.

39.

Radiation-sensitive mutants of Arabidopsis thaliana.

Jenkins ME, Harlow GR, Liu Z, Shotwell MA, Ma J, Mount DW.

Genetics. 1995 Jun;140(2):725-32.

40.

Identification of high affinity binding sites for LexA which define new DNA damage-inducible genes in Escherichia coli.

Lewis LK, Harlow GR, Gregg-Jolly LA, Mount DW.

J Mol Biol. 1994 Aug 26;241(4):507-23.

PMID:
8057377
41.

Isolation of uvh1, an Arabidopsis mutant hypersensitive to ultraviolet light and ionizing radiation.

Harlow GR, Jenkins ME, Pittalwala TS, Mount DW.

Plant Cell. 1994 Feb;6(2):227-35.

42.

Analysis of the genetic requirements for viability of Escherichia coli K-12 DNA adenine methylase (dam) mutants.

Peterson KR, Mount DW.

J Bacteriol. 1993 Nov;175(22):7505-8. Erratum in: J Bacteriol 1994 Mar;176(5):1554.

45.

Genetic identification of the DNA binding domain of Escherichia coli LexA protein.

Thliveris AT, Mount DW.

Proc Natl Acad Sci U S A. 1992 May 15;89(10):4500-4.

46.
47.

Sequence of the Salmonella typhimurium LT2 lexA gene and its regulatory region.

Mustard JA, Thliveris AT, Mount DW.

Nucleic Acids Res. 1992 Apr 11;20(7):1813. No abstract available.

49.

Repression of the E coli recA gene requires at least two LexA protein monomers.

Thliveris AT, Little JW, Mount DW.

Biochimie. 1991 Apr;73(4):449-56.

PMID:
1911945
50.

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