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Items: 1 to 50 of 85

1.

Streptococcus pyogenes transcriptome changes in inflammatory environment of necrotizing fasciitis.

Hirose Y, Yamaguchi M, Okuzaki D, Motooka D, Hamamoto H, Hanada T, Sumitomo T, Nakata M, Kawabata S.

Appl Environ Microbiol. 2019 Aug 30. pii: AEM.01428-19. doi: 10.1128/AEM.01428-19. [Epub ahead of print]

2.

Specific increase of Fusobacterium in the faecal microbiota of neonatal calves infected with Cryptosporidium parvum.

Ichikawa-Seki M, Motooka D, Kinami A, Murakoshi F, Takahashi Y, Aita J, Hayashi K, Tashibu A, Nakamura S, Iida T, Horii T, Nishikawa Y.

Sci Rep. 2019 Aug 29;9(1):12517. doi: 10.1038/s41598-019-48969-6.

3.

Distinct methylation levels of mature microRNAs in gastrointestinal cancers.

Konno M, Koseki J, Asai A, Yamagata A, Shimamura T, Motooka D, Okuzaki D, Kawamoto K, Mizushima T, Eguchi H, Takiguchi S, Satoh T, Mimori K, Ochiya T, Doki Y, Ofusa K, Mori M, Ishii H.

Nat Commun. 2019 Aug 29;10(1):3888. doi: 10.1038/s41467-019-11826-1.

4.

Phosphorothioation of foreign DNA influences the transformation efficiency in Clostridium perfringens NCTC8239.

Yasugi M, Motooka D, Nakamura S, Miyake M.

Anaerobe. 2019 Aug 8:102085. doi: 10.1016/j.anaerobe.2019.102085. [Epub ahead of print]

PMID:
31401257
5.

Characterization of human pegivirus infection in liver transplantation recipients.

Izumi T, Sakata K, Okuzaki D, Inokuchi S, Tamura T, Motooka D, Nakamura S, Ono C, Shimokawa M, Matsuura Y, Mori M, Fukuhara T, Yoshizumi T.

J Med Virol. 2019 Jul 27. doi: 10.1002/jmv.25555. [Epub ahead of print]

PMID:
31350911
6.

Comprehensive subspecies identification of 175 nontuberculous mycobacteria species based on 7547 genomic profiles.

Matsumoto Y, Kinjo T, Motooka D, Nabeya D, Jung N, Uechi K, Horii T, Iida T, Fujita J, Nakamura S.

Emerg Microbes Infect. 2019;8(1):1043-1053. doi: 10.1080/22221751.2019.1637702.

7.

Conjunctival dysbiosis in mucosa-associated lymphoid tissue lymphoma.

Asao K, Hashida N, Ando S, Motooka D, Kurakami H, Nakamura S, Yamashita D, Maruyama K, Kawasaki S, Yamada T, Iida T, Nishida K.

Sci Rep. 2019 Jun 10;9(1):8424. doi: 10.1038/s41598-019-44861-5.

8.

Characterization of a carbapenem- and colistin-resistant Enterobacter cloacae carrying Tn6901 in bla NDM-1 genomic context.

Le-Ha TD, Le L, Le-Vo HN, Anda M, Motooka D, Nakamura S, Tran LK, Tran PT, Iida T, Cao V.

Infect Drug Resist. 2019 Apr 3;12:733-739. doi: 10.2147/IDR.S194495. eCollection 2019.

9.

BATF2 prevents T-cell-mediated intestinal inflammation through regulation of the IL-23/IL-17 pathway.

Kayama H, Tani H, Kitada S, Opasawatchai A, Okumura R, Motooka D, Nakamura S, Takeda K.

Int Immunol. 2019 May 21;31(6):371-383. doi: 10.1093/intimm/dxz014.

10.

Urinary tract infection due to anaerobic bacteria in a two-month-old infant.

Tao C, Kinoshita N, Shoji K, Motooka D, Nakamura S, Eura R, Ueoka K, Kubota M, Ishiguro A, Miyairi I.

J Infect Chemother. 2019 May;25(5):368-370. doi: 10.1016/j.jiac.2018.11.016. Epub 2019 Jan 25.

PMID:
30686700
11.

Extremely strong infiltration of WT1-specific CTLs into mouse tumor by the combination vaccine with WT1-specific CTL and helper peptides.

Nakata J, Nakajima H, Hayashibara H, Imafuku K, Morimoto S, Fujiki F, Motooka D, Okuzaki D, Hasegawa K, Hosen N, Tsuboi A, Oka Y, Kumanogoh A, Oji Y, Sugiyama H.

Oncotarget. 2018 Nov 13;9(89):36029-36038. doi: 10.18632/oncotarget.26338. eCollection 2018 Nov 13.

12.

Spreading Patterns of NDM-Producing Enterobacteriaceae in Clinical and Environmental Settings in Yangon, Myanmar.

Sugawara Y, Akeda Y, Hagiya H, Sakamoto N, Takeuchi D, Shanmugakani RK, Motooka D, Nishi I, Zin KN, Aye MM, Myint T, Tomono K, Hamada S.

Antimicrob Agents Chemother. 2019 Feb 26;63(3). pii: e01924-18. doi: 10.1128/AAC.01924-18. Print 2019 Mar.

13.

Genomic Characterization of Carbapenemase-Producing Klebsiella pneumoniae with Chromosomally Carried bla NDM-1.

Sakamoto N, Akeda Y, Sugawara Y, Takeuchi D, Motooka D, Yamamoto N, Laolerd W, Santanirand P, Hamada S.

Antimicrob Agents Chemother. 2018 Nov 26;62(12). pii: e01520-18. doi: 10.1128/AAC.01520-18. Print 2018 Dec.

14.

Diffusely Adherent Escherichia coli Strains Isolated from Healthy Carriers Suppress Cytokine Secretions of Epithelial Cells Stimulated by Inflammatory Substances.

Tanimoto Y, Tamai S, Matsuzaki T, Takeuchi N, Noju T, Yanagida S, Kage-Nakadai E, Yamaguchi Y, Kodama T, Nakamura S, Motooka D, Iida T, Nishikawa Y.

Infect Immun. 2018 Dec 19;87(1). pii: e00683-18. doi: 10.1128/IAI.00683-18. Print 2019 Jan.

15.

Regnase-1 controls colon epithelial regeneration via regulation of mTOR and purine metabolism.

Nagahama Y, Shimoda M, Mao G, Singh SK, Kozakai Y, Sun X, Motooka D, Nakamura S, Tanaka H, Satoh T, Maeda K, Akira S.

Proc Natl Acad Sci U S A. 2018 Oct 23;115(43):11036-11041. doi: 10.1073/pnas.1809575115. Epub 2018 Oct 8.

16.

A Convolutional Neural Network Uses Microscopic Images to Differentiate between Mouse and Human Cell Lines and Their Radioresistant Clones.

Toratani M, Konno M, Asai A, Koseki J, Kawamoto K, Tamari K, Li Z, Sakai D, Kudo T, Satoh T, Sato K, Motooka D, Okuzaki D, Doki Y, Mori M, Ogawa K, Ishii H.

Cancer Res. 2018 Dec 1;78(23):6703-6707. doi: 10.1158/0008-5472.CAN-18-0653. Epub 2018 Sep 25.

PMID:
30254144
17.

WU polyomavirus detected in children with severe respiratory failure.

Uda K, Koyama-Wakai C, Shoji K, Iwase N, Motooka D, Nakamura S, Miyairi I.

J Clin Virol. 2018 Oct;107:25-28. doi: 10.1016/j.jcv.2018.08.003. Epub 2018 Aug 9.

PMID:
30114678
18.

Heme ameliorates dextran sodium sulfate-induced colitis through providing intestinal macrophages with noninflammatory profiles.

Kayama H, Kohyama M, Okuzaki D, Motooka D, Barman S, Okumura R, Muneta M, Hoshino K, Sasaki I, Ise W, Matsuno H, Nishimura J, Kurosaki T, Nakamura S, Arase H, Kaisho T, Takeda K.

Proc Natl Acad Sci U S A. 2018 Aug 14;115(33):8418-8423. doi: 10.1073/pnas.1808426115. Epub 2018 Jul 30.

19.

Allergic conversion of protective mucosal immunity against nasal bacteria in patients with chronic rhinosinusitis with nasal polyposis.

Takeda K, Sakakibara S, Yamashita K, Motooka D, Nakamura S, El Hussien MA, Katayama J, Maeda Y, Nakata M, Hamada S, Standley DM, Hayama M, Shikina T, Inohara H, Kikutani H.

J Allergy Clin Immunol. 2019 Mar;143(3):1163-1175.e15. doi: 10.1016/j.jaci.2018.07.006. Epub 2018 Jul 25.

PMID:
30053529
20.

High salt intake increases plasma trimethylamine N-oxide (TMAO) concentration and produces gut dysbiosis in rats.

Bielinska K, Radkowski M, Grochowska M, Perlejewski K, Huc T, Jaworska K, Motooka D, Nakamura S, Ufnal M.

Nutrition. 2018 Oct;54:33-39. doi: 10.1016/j.nut.2018.03.004. Epub 2018 Mar 22.

PMID:
29705499
21.

The presence of colistin resistance gene mcr-1 and -3 in ESBL producing Escherichia coli isolated from food in Ho Chi Minh City, Vietnam.

Yamaguchi T, Kawahara R, Harada K, Teruya S, Nakayama T, Motooka D, Nakamura S, Nguyen PD, Kumeda Y, Van Dang C, Hirata K, Yamamoto Y.

FEMS Microbiol Lett. 2018 Jun 1;365(11). doi: 10.1093/femsle/fny100.

PMID:
29684127
22.

Non-Ischemic Heart Failure With Reduced Ejection Fraction Is Associated With Altered Intestinal Microbiota.

Katsimichas T, Ohtani T, Motooka D, Tsukamoto Y, Kioka H, Nakamoto K, Konishi S, Chimura M, Sengoku K, Miyawaki H, Sakaguchi T, Okumura R, Theofilis K, Iida T, Takeda K, Nakamura S, Sakata Y.

Circ J. 2018 May 25;82(6):1640-1650. doi: 10.1253/circj.CJ-17-1285. Epub 2018 Mar 30.

23.

A case of severe soft tissue infection due to Streptococcus tigurinus diagnosed by necropsy in which genomic analysis was useful for clarifying its pathogenicity.

Yoshizawa H, Motooka D, Matsumoto Y, Katada R, Nakamura S, Morii E, Iida T, Matsumoto H.

Pathol Int. 2018 May;68(5):301-306. doi: 10.1111/pin.12656. Epub 2018 Mar 23.

PMID:
29570912
24.

Identification of a Golgi GPI-N-acetylgalactosamine transferase with tandem transmembrane regions in the catalytic domain.

Hirata T, Mishra SK, Nakamura S, Saito K, Motooka D, Takada Y, Kanzawa N, Murakami Y, Maeda Y, Fujita M, Yamaguchi Y, Kinoshita T.

Nat Commun. 2018 Jan 26;9(1):405. doi: 10.1038/s41467-017-02799-0.

25.

Molecular Characterization of IMP-1-Producing Enterobacter cloacae Complex Isolates in Tokyo.

Aoki K, Harada S, Yahara K, Ishii Y, Motooka D, Nakamura S, Akeda Y, Iida T, Tomono K, Iwata S, Moriya K, Tateda K.

Antimicrob Agents Chemother. 2018 Feb 23;62(3). pii: e02091-17. doi: 10.1128/AAC.02091-17. Print 2018 Mar.

26.

Hydrogen-Rich Saline Regulates Intestinal Barrier Dysfunction, Dysbiosis, and Bacterial Translocation in a Murine Model of Sepsis.

Ikeda M, Shimizu K, Ogura H, Kurakawa T, Umemoto E, Motooka D, Nakamura S, Ichimaru N, Takeda K, Takahara S, Hirano SI, Shimazu T.

Shock. 2018 Dec;50(6):640-647. doi: 10.1097/SHK.0000000000001098.

PMID:
29293174
27.

N-Glycan-dependent protein folding and endoplasmic reticulum retention regulate GPI-anchor processing.

Liu YS, Guo XY, Hirata T, Rong Y, Motooka D, Kitajima T, Murakami Y, Gao XD, Nakamura S, Kinoshita T, Fujita M.

J Cell Biol. 2018 Feb 5;217(2):585-599. doi: 10.1083/jcb.201706135. Epub 2017 Dec 18.

28.

Clonal evolution and antigen recognition of anti-nuclear antibodies in acute systemic lupus erythematosus.

Sakakibara S, Arimori T, Yamashita K, Jinzai H, Motooka D, Nakamura S, Li S, Takeda K, Katayama J, El Hussien MA, Narazaki M, Tanaka T, Standley DM, Takagi J, Kikutani H.

Sci Rep. 2017 Nov 27;7(1):16428. doi: 10.1038/s41598-017-16681-y.

29.

Mutation accumulation under UV radiation in Escherichia coli.

Shibai A, Takahashi Y, Ishizawa Y, Motooka D, Nakamura S, Ying BW, Tsuru S.

Sci Rep. 2017 Nov 6;7(1):14531. doi: 10.1038/s41598-017-15008-1.

30.

Corrigendum to "Plasmid dynamics in Vibrio parahaemolyticus strains related to shrimp Acute Hepatopancreatic Necrosis Syndrome (AHPNS)" [Infect. Genet. Evol. (2017) 51: 211-218].

Theethakaew C, Nakamura S, Motooka D, Matsuda S, Kodama T, Chonsin K, Suthienkul O, Iida T.

Infect Genet Evol. 2018 Jan;57:185. doi: 10.1016/j.meegid.2017.10.012. Epub 2017 Oct 18. No abstract available.

PMID:
29054533
31.

Addendum: Guidance of regulatory T cell development by Satb1-dependent super-enhancer establishment.

Kitagawa Y, Ohkura N, Kidani Y, Vandenbon A, Hirota K, Kawakami R, Yasuda K, Motooka D, Nakamura S, Kondo M, Taniuchi I, Kohwi-Shigematsu T, Sakaguchi S.

Nat Immunol. 2017 Oct 18;18(11):1270. doi: 10.1038/ni1117-1270a.

PMID:
29044238
32.

Genetic characterization of blaNDM-harboring plasmids in carbapenem-resistant Escherichia coli from Myanmar.

Sugawara Y, Akeda Y, Sakamoto N, Takeuchi D, Motooka D, Nakamura S, Hagiya H, Yamamoto N, Nishi I, Yoshida H, Okada K, Zin KN, Aye MM, Tomono K, Hamada S.

PLoS One. 2017 Sep 14;12(9):e0184720. doi: 10.1371/journal.pone.0184720. eCollection 2017. Erratum in: PLoS One. 2017 Dec 6;12 (12 ):e0189435.

33.

Highly sensitive detection of ESR1 mutations in cell-free DNA from patients with metastatic breast cancer using molecular barcode sequencing.

Masunaga N, Kagara N, Motooka D, Nakamura S, Miyake T, Tanei T, Naoi Y, Shimoda M, Shimazu K, Kim SJ, Noguchi S.

Breast Cancer Res Treat. 2018 Jan;167(1):49-58. doi: 10.1007/s10549-017-4487-y. Epub 2017 Sep 13.

PMID:
28905136
34.

Whole-Genome Sequence of Streptococcus tigurinus Strain osk_001, Isolated from Postmortem Material.

Yoshizawa H, Motooka D, Katada R, Matsumoto Y, Nakamura S, Morii E, Iida T, Matsumoto H.

Genome Announc. 2017 Aug 31;5(35). pii: e00878-17. doi: 10.1128/genomeA.00878-17.

35.

The cell envelope-associated phospholipid-binding protein LmeA is required for mannan polymerization in mycobacteria.

Rahlwes KC, Ha SA, Motooka D, Mayfield JA, Baumoel LR, Strickland JN, Torres-Ocampo AP, Nakamura S, Morita YS.

J Biol Chem. 2017 Oct 20;292(42):17407-17417. doi: 10.1074/jbc.M117.804377. Epub 2017 Aug 29.

36.

Suppression of HBV replication by the expression of nickase- and nuclease dead-Cas9.

Kurihara T, Fukuhara T, Ono C, Yamamoto S, Uemura K, Okamoto T, Sugiyama M, Motooka D, Nakamura S, Ikawa M, Mizokami M, Maehara Y, Matsuura Y.

Sci Rep. 2017 Jul 21;7(1):6122. doi: 10.1038/s41598-017-05905-w.

37.

Temporal dynamics of bacterial microbiota in the human oral cavity determined using an in situ model of dental biofilms.

Wake N, Asahi Y, Noiri Y, Hayashi M, Motooka D, Nakamura S, Gotoh K, Miura J, Machi H, Iida T, Ebisu S.

NPJ Biofilms Microbiomes. 2016 Aug 10;2:16018. doi: 10.1038/npjbiofilms.2016.18. eCollection 2016.

38.

Draft Genome Sequence of Plasmodium gonderi, a Malaria Parasite of African Old World Monkeys.

Honma H, Kawai S, Motooka D, Nakamura S, Tougan T, Horii T, Arisue N.

Genome Announc. 2017 Jul 13;5(28). pii: e00612-17. doi: 10.1128/genomeA.00612-17.

39.

Wilms tumour 1 peptide vaccine as a cure-oriented post-chemotherapy strategy for patients with acute myeloid leukaemia at high risk of relapse.

Nakata J, Nakae Y, Kawakami M, Morimoto S, Motooka D, Hosen N, Fujiki F, Nakajima H, Hasegawa K, Nishida S, Tsuboi A, Oji Y, Oka Y, Kumanogoh A, Sugiyama H.

Br J Haematol. 2018 Jul;182(2):287-290. doi: 10.1111/bjh.14768. Epub 2017 May 23. No abstract available.

PMID:
28542830
40.

Characterization of miR-122-independent propagation of HCV.

Ono C, Fukuhara T, Motooka D, Nakamura S, Okuzaki D, Yamamoto S, Tamura T, Mori H, Sato A, Uemura K, Fauzyah Y, Kurihara T, Suda T, Nishio A, Hmwe SS, Okamoto T, Tatsumi T, Takehara T, Chayama K, Wakita T, Koike K, Matsuura Y.

PLoS Pathog. 2017 May 11;13(5):e1006374. doi: 10.1371/journal.ppat.1006374. eCollection 2017 May.

41.

Genome-Wide Screening Uncovers the Significance of N-Sulfation of Heparan Sulfate as a Host Cell Factor for Chikungunya Virus Infection.

Tanaka A, Tumkosit U, Nakamura S, Motooka D, Kishishita N, Priengprom T, Sa-Ngasang A, Kinoshita T, Takeda N, Maeda Y.

J Virol. 2017 Jun 9;91(13). pii: e00432-17. doi: 10.1128/JVI.00432-17. Print 2017 Jul 1.

42.

Plasmid dynamics in Vibrio parahaemolyticus strains related to shrimp Acute Hepatopancreatic Necrosis Syndrome (AHPNS).

Theethakaew C, Nakamura S, Motooka D, Matsuda S, Kodama T, Chonsin K, Suthienkul O, Iida T.

Infect Genet Evol. 2017 Jul;51:211-218. doi: 10.1016/j.meegid.2017.04.007. Epub 2017 Apr 9. Erratum in: Infect Genet Evol. 2018 Jan;57:185.

PMID:
28404482
43.

Phenotype-genotype correlations of PIGO deficiency with variable phenotypes from infantile lethality to mild learning difficulties.

Tanigawa J, Mimatsu H, Mizuno S, Okamoto N, Fukushi D, Tominaga K, Kidokoro H, Muramatsu Y, Nishi E, Nakamura S, Motooka D, Nomura N, Hayasaka K, Niihori T, Aoki Y, Nabatame S, Hayakawa M, Natsume J, Ozono K, Kinoshita T, Wakamatsu N, Murakami Y.

Hum Mutat. 2017 Jul;38(7):805-815. doi: 10.1002/humu.23219. Epub 2017 Apr 20.

PMID:
28337824
44.

Quasispecies of Hepatitis C Virus Participate in Cell-Specific Infectivity.

Fukuhara T, Yamamoto S, Ono C, Nakamura S, Motooka D, Mori H, Kurihara T, Sato A, Tamura T, Motomura T, Okamoto T, Imamura M, Ikegami T, Yoshizumi T, Soejima Y, Maehara Y, Chayama K, Matsuura Y.

Sci Rep. 2017 Mar 22;7:45228. doi: 10.1038/srep45228.

45.

Erratum: Guidance of regulatory T cell development by Satb1-dependent super-enhancer establishment.

Kitagawa Y, Ohkura N, Kidani Y, Vandenbon A, Hirota K, Kawakami R, Yasuda K, Motooka D, Nakamura S, Kondo M, Taniuchi I, Kohwi-Shigematsu T, Sakaguchi S.

Nat Immunol. 2017 Mar 22;18(4):474. doi: 10.1038/ni0417-474d. No abstract available.

PMID:
28323270
46.

Fungal ITS1 Deep-Sequencing Strategies to Reconstruct the Composition of a 26-Species Community and Evaluation of the Gut Mycobiota of Healthy Japanese Individuals.

Motooka D, Fujimoto K, Tanaka R, Yaguchi T, Gotoh K, Maeda Y, Furuta Y, Kurakawa T, Goto N, Yasunaga T, Narazaki M, Kumanogoh A, Horii T, Iida T, Takeda K, Nakamura S.

Front Microbiol. 2017 Feb 15;8:238. doi: 10.3389/fmicb.2017.00238. eCollection 2017.

47.

The clinical and phylogenetic investigation for a nosocomial outbreak of respiratory syncytial virus infection in an adult hemato-oncology unit.

Nabeya D, Kinjo T, Parrott GL, Uehara A, Motooka D, Nakamura S, Nahar S, Nakachi S, Nakamatsu M, Maeshiro S, Haranaga S, Tateyama M, Tomoyose T, Masuzaki H, Horii T, Fujita J.

J Med Virol. 2017 Aug;89(8):1364-1372. doi: 10.1002/jmv.24800. Epub 2017 Mar 22.

PMID:
28240370
48.

Postnatal changes in the relative abundance of intestinal Lactobacillus spp. in newborn calves.

Takino T, Kato-Mori Y, Motooka D, Nakamura S, Iida T, Hagiwara K.

J Vet Med Sci. 2017 Mar 18;79(3):452-455. doi: 10.1292/jvms.16-0406. Epub 2017 Jan 8.

49.

Guidance of regulatory T cell development by Satb1-dependent super-enhancer establishment.

Kitagawa Y, Ohkura N, Kidani Y, Vandenbon A, Hirota K, Kawakami R, Yasuda K, Motooka D, Nakamura S, Kondo M, Taniuchi I, Kohwi-Shigematsu T, Sakaguchi S.

Nat Immunol. 2017 Feb;18(2):173-183. doi: 10.1038/ni.3646. Epub 2016 Dec 19. Erratum in: Nat Immunol. 2017 Mar 22;18(4):474. Nat Immunol. 2017 Oct 18;18(11):1270.

50.

An Epidemiological Analysis of Summer Influenza Epidemics in Okinawa.

Sunagawa S, Iha Y, Taira K, Okano S, Kinjo T, Higa F, Kuba K, Tateyama M, Nakamura K, Nakamura S, Motooka D, Horii T, Parrott GL, Fujita J.

Intern Med. 2016;55(24):3579-3584. Epub 2016 Dec 15. Review.

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