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Items: 1 to 50 of 160

1.

18F-Sodium fluoride PET/CT predicts overall survival in patients with advanced genitourinary malignancies treated with cabozantinib and nivolumab with or without ipilimumab.

Lim I, Lindenberg ML, Mena E, Verdini N, Shih JH, Mayfield C, Thompson R, Lin J, Vega A, Mallek M, Cadena J, Diaz C, Mortazavi A, Knopp M, Wright C, Stein M, Pal S, Choyke PL, Apolo AB.

Eur J Nucl Med Mol Imaging. 2019 Sep 14. doi: 10.1007/s00259-019-04483-5. [Epub ahead of print]

PMID:
31522271
2.

Identification of bovine uterine transcriptomic hub genes using Bayesian network algorithms.

Mortazavi A, Rashidi A, Ghaderi-Zefrehei M, Moradi P, Razmkabir M.

Asian-Australas J Anim Sci. 2019 Aug 3. doi: 10.5713/ajas.18.0959. [Epub ahead of print]

3.

Intra-individual changes in methylome profiles: an epigenetic 'scar' of early-life adversity?

Mortazavi A, Baram TZ.

Neuropsychopharmacology. 2019 Aug 30. doi: 10.1038/s41386-019-0496-3. [Epub ahead of print] No abstract available.

PMID:
31471558
4.

Individualised axitinib regimen for patients with metastatic renal cell carcinoma after treatment with checkpoint inhibitors: a multicentre, single-arm, phase 2 study.

Ornstein MC, Pal SK, Wood LS, Tomer JM, Hobbs BP, Jia XS, Allman KD, Martin A, Olencki T, Davis NB, Gilligan TD, Mortazavi A, Rathmell WK, Garcia JA, Rini BI.

Lancet Oncol. 2019 Oct;20(10):1386-1394. doi: 10.1016/S1470-2045(19)30513-3. Epub 2019 Aug 16.

PMID:
31427205
5.

Phase II California Cancer Consortium Trial of Gemcitabine-Eribulin Combination in Cisplatin-Ineligible Patients With Metastatic Urothelial Carcinoma: Final Report (NCI-9653).

Sadeghi S, Groshen SG, Tsao-Wei DD, Parikh R, Mortazavi A, Dorff TB, Kefauver C, Hoimes C, Doyle L, Quinn DI, Newman E, Lara PN Jr.

J Clin Oncol. 2019 Oct 10;37(29):2682-2688. doi: 10.1200/JCO.19.00861. Epub 2019 Aug 7.

PMID:
31390274
6.

The genome of Peromyscus leucopus, natural host for Lyme disease and other emerging infections.

Long AD, Baldwin-Brown J, Tao Y, Cook VJ, Balderrama-Gutierrez G, Corbett-Detig R, Mortazavi A, Barbour AG.

Sci Adv. 2019 Jul 24;5(7):eaaw6441. doi: 10.1126/sciadv.aaw6441. eCollection 2019 Jul.

7.

Use of Fish Oil Nanoencapsulated with Gum Arabic Carrier in Low Fat Probiotic Fermented Milk.

Moghadam FV, Pourahmad R, Mortazavi A, Davoodi D, Azizinezhad R.

Food Sci Anim Resour. 2019 Apr;39(2):309-323. doi: 10.5851/kosfa.2019.e25. Epub 2019 Apr 30.

8.

Hybrid Assembly of the Genome of the Entomopathogenic Nematode Steinernema carpocapsae Identifies the X-Chromosome.

Serra L, Macchietto M, Macias-Muñoz A, McGill CJ, Rodriguez IM, Rodriguez B, Murad R, Mortazavi A.

G3 (Bethesda). 2019 Aug 8;9(8):2687-2697. doi: 10.1534/g3.119.400180.

9.

A core set of venom proteins is released by entomopathogenic nematodes in the genus Steinernema.

Chang DZ, Serra L, Lu D, Mortazavi A, Dillman AR.

PLoS Pathog. 2019 May 1;15(5):e1007626. doi: 10.1371/journal.ppat.1007626. eCollection 2019 May.

10.

miR-128 Restriction of LINE-1 (L1) Retrotransposition Is Dependent on Targeting hnRNPA1 mRNA.

Fung L, Guzman H, Sevrioukov E, Idica A, Park E, Bochnakian A, Daugaard I, Jury D, Mortazavi A, Zisoulis DG, Pedersen IM.

Int J Mol Sci. 2019 Apr 21;20(8). pii: E1955. doi: 10.3390/ijms20081955.

11.

Feedforward regulation of Myc coordinates lineage-specific with housekeeping gene expression during B cell progenitor cell differentiation.

Ferreirós-Vidal I, Carroll T, Zhang T, Lagani V, Ramirez RN, Ing-Simmons E, Gómez-Valadés AG, Cooper L, Liang Z, Papoutsoglou G, Dharmalingam G, Guo Y, Tarazona S, Fernandes SJ, Noori P, Silberberg G, Fisher AG, Tsamardinos I, Mortazavi A, Lenhard B, Conesa A, Tegner J, Merkenschlager M, Gomez-Cabrero D.

PLoS Biol. 2019 Apr 12;17(4):e2006506. doi: 10.1371/journal.pbio.2006506. eCollection 2019 Apr.

12.

Intra-individual methylomics detects the impact of early-life adversity.

Jiang S, Kamei N, Bolton JL, Ma X, Stern HS, Baram TZ, Mortazavi A.

Life Sci Alliance. 2019 Apr 1;2(2). pii: e201800204. doi: 10.26508/lsa.201800204. Print 2019 Apr.

13.

Dural Arteriovenous Fistulas with Venous Drainage Patterns Inducing Ocular Manifestations Mimicking a Carotid Cavernous Fistula: Report of 2 Cases.

Ghorbani M, Asaadi S, Wipplinger C, Griessenauer CJ, Zangi-Abadi F, Mortazavi A.

World Neurosurg. 2019 Jul;127:216-219. doi: 10.1016/j.wneu.2019.03.136. Epub 2019 Mar 23.

PMID:
30910749
14.

Cabozantinib in advanced non-clear-cell renal cell carcinoma: a multicentre, retrospective, cohort study.

Martínez Chanzá N, Xie W, Asim Bilen M, Dzimitrowicz H, Burkart J, Geynisman DM, Balakrishnan A, Bowman IA, Jain R, Stadler W, Zakharia Y, Narayan V, Beuselinck B, McKay RR, Tripathi A, Pachynski R, Hahn AW, Hsu J, Shah SA, Lam ET, Rose TL, Mega AE, Vogelzang N, Harrison MR, Mortazavi A, Plimack ER, Vaishampayan U, Hammers H, George S, Haas N, Agarwal N, Pal SK, Srinivas S, Carneiro BA, Heng DYC, Bosse D, Choueiri TK, Harshman LC.

Lancet Oncol. 2019 Apr;20(4):581-590. doi: 10.1016/S1470-2045(18)30907-0. Epub 2019 Feb 28.

PMID:
30827746
15.

Phase I Immunotherapy Trial with Two Chimeric HER-2 B-Cell Peptide Vaccines Emulsified in Montanide ISA 720VG and Nor-MDP Adjuvant in Patients with Advanced Solid Tumors.

Bekaii-Saab T, Wesolowski R, Ahn DH, Wu C, Mortazavi A, Lustberg M, Ramaswamy B, Fowler J, Wei L, Overholser J, Kaumaya PTP.

Clin Cancer Res. 2019 Jun 15;25(12):3495-3507. doi: 10.1158/1078-0432.CCR-18-3997. Epub 2019 Feb 25.

PMID:
30804020
16.
17.

Judging Domestic Violence From the Bench: A Narrative Analysis of Judicial Anecdotes About Domestic Violence Protective Order Cases.

Kafka JM, Moracco KE, Barrington C, Mortazavi AL.

Qual Health Res. 2019 Jul;29(8):1132-1144. doi: 10.1177/1049732318821691. Epub 2019 Jan 4.

PMID:
30608215
18.

Mocetinostat for patients with previously treated, locally advanced/metastatic urothelial carcinoma and inactivating alterations of acetyltransferase genes.

Grivas P, Mortazavi A, Picus J, Hahn NM, Milowsky MI, Hart LL, Alva A, Bellmunt J, Pal SK, Bambury RM, O'Donnell PH, Gupta S, Guancial EA, Sonpavde GP, Faltaos D, Potvin D, Christensen JG, Chao RC, Rosenberg JE.

Cancer. 2019 Feb 15;125(4):533-540. doi: 10.1002/cncr.31817. Epub 2018 Dec 20.

19.

Transmembrane Helix Integrity versus Fraying To Expose Hydrogen Bonds at a Membrane-Water Interface.

Afrose F, McKay MJ, Mortazavi A, Suresh Kumar V, Greathouse DV, Koeppe RE 2nd.

Biochemistry. 2019 Feb 12;58(6):633-645. doi: 10.1021/acs.biochem.8b01119. Epub 2019 Jan 3.

PMID:
30565458
20.

A limited capacity for microglial repopulation in the adult brain.

Najafi AR, Crapser J, Jiang S, Ng W, Mortazavi A, West BL, Green KN.

Glia. 2018 Nov;66(11):2385-2396. doi: 10.1002/glia.23477. Epub 2018 Oct 28.

21.

The Effect of Omega-3 Fatty Acids on Serum Apelin Levels in Cardiovascular Disease: A Randomized, Double-Blind, Placebo-Controlled Trial.

Mortazavi A, Nematipoor E, Djalali M, Keshavarz SA, Samavat S, Zarei M, Javanbakht MH.

Rep Biochem Mol Biol. 2018 Oct;7(1):59-66.

22.

Multicenter Phase 2 Trial of Gemcitabine, Carboplatin, and Sorafenib in Patients With Metastatic or Unresectable Transitional-Cell Carcinoma.

Hurwitz ME, Markowski P, Yao X, Deshpande H, Patel J, Mortazavi A, Donadio A, Stein MN, Kelly WK, Petrylak DP, Mehnert JM.

Clin Genitourin Cancer. 2018 Dec;16(6):437-444.e6. doi: 10.1016/j.clgc.2018.07.021. Epub 2018 Jul 29.

PMID:
30177237
23.

Phase II randomized, double-blind, placebo-controlled study of tivantinib in men with asymptomatic or minimally symptomatic metastatic castration-resistant prostate cancer (mCRPC).

Monk P, Liu G, Stadler WM, Geyer S, Huang Y, Wright J, Villalona-Calero M, Wade J, Szmulewitz R, Gupta S, Mortazavi A, Dreicer R, Pili R, Dawson N, George S, Garcia JA.

Invest New Drugs. 2018 Oct;36(5):919-926. doi: 10.1007/s10637-018-0630-9. Epub 2018 Aug 7.

24.

Cruciferous Vegetables, Isothiocyanates, and Bladder Cancer Prevention.

Abbaoui B, Lucas CR, Riedl KM, Clinton SK, Mortazavi A.

Mol Nutr Food Res. 2018 Sep;62(18):e1800079. doi: 10.1002/mnfr.201800079. Epub 2018 Aug 29. Review.

25.

Corrigendum: SQANTI: extensive characterization of long-read transcript sequences for quality control in full-length transcriptome identification and quantification.

Tardaguila M, de la Fuente L, Marti C, Pereira C, Pardo-Palacios FJ, Del Risco H, Ferrell M, Mellado M, Macchietto M, Verheggen K, Edelmann M, Ezkurdia I, Vazquez J, Tress M, Mortazavi A, Martens L, Rodriguez-Navarro S, Moreno-Manzano V, Conesa A.

Genome Res. 2018 Jul;28(7):1096. doi: 10.1101/gr.239137.118. No abstract available.

26.

TranscriptClean: variant-aware correction of indels, mismatches and splice junctions in long-read transcripts.

Wyman D, Mortazavi A.

Bioinformatics. 2019 Jan 15;35(2):340-342. doi: 10.1093/bioinformatics/bty483.

27.

Efficacy of BGJ398, a Fibroblast Growth Factor Receptor 1-3 Inhibitor, in Patients with Previously Treated Advanced Urothelial Carcinoma with FGFR3 Alterations.

Pal SK, Rosenberg JE, Hoffman-Censits JH, Berger R, Quinn DI, Galsky MD, Wolf J, Dittrich C, Keam B, Delord JP, Schellens JHM, Gravis G, Medioni J, Maroto P, Sriuranpong V, Charoentum C, Burris HA, Grünwald V, Petrylak D, Vaishampayan U, Gez E, De Giorgi U, Lee JL, Voortman J, Gupta S, Sharma S, Mortazavi A, Vaughn DJ, Isaacs R, Parker K, Chen X, Yu K, Porter D, Graus Porta D, Bajorin DF.

Cancer Discov. 2018 Jul;8(7):812-821. doi: 10.1158/2159-8290.CD-18-0229. Epub 2018 May 30.

28.

Spatially Restricting Bioorthogonal Nucleoside Biosynthesis Enables Selective Metabolic Labeling of the Mitochondrial Transcriptome.

Nguyen K, Aggarwal MB, Feng C, Balderrama G, Fazio M, Mortazavi A, Spitale RC.

ACS Chem Biol. 2018 Jun 15;13(6):1474-1479. doi: 10.1021/acschembio.8b00262. Epub 2018 May 17.

29.

Effect of metal opaquer on the final color of 3 ceramic crown types on 3 abutment configurations.

Arif R, Yilmaz B, Mortazavi A, Ozcelik TB, Johnston WM.

J Prosthet Dent. 2018 Sep;120(3):375-381. doi: 10.1016/j.prosdent.2017.11.030. Epub 2018 Apr 30.

PMID:
29724553
30.

Effects of a Group-Mediated Exercise and Dietary Intervention in the Treatment of Prostate Cancer Patients Undergoing Androgen Deprivation Therapy: Results From the IDEA-P Trial.

Focht BC, Lucas AR, Grainger E, Simpson C, Fairman CM, Thomas-Ahner JM, Buell J, Monk JP, Mortazavi A, Clinton SK.

Ann Behav Med. 2018 Apr 19;52(5):412-428. doi: 10.1093/abm/kax002.

31.

Integrating ChIP-seq with other functional genomics data.

Jiang S, Mortazavi A.

Brief Funct Genomics. 2018 Mar 1;17(2):104-115. doi: 10.1093/bfgp/ely002. Review.

32.

Adapting the Smart-seq2 Protocol for Robust Single Worm RNA-seq.

Serra L, Chang DZ, Macchietto M, Williams K, Murad R, Lu D, Dillman AR, Mortazavi A.

Bio Protoc. 2018 Feb 20;8(4). pii: e2729. doi: 10.21769/BioProtoc.2729.

33.

SQANTI: extensive characterization of long-read transcript sequences for quality control in full-length transcriptome identification and quantification.

Tardaguila M, de la Fuente L, Marti C, Pereira C, Pardo-Palacios FJ, Del Risco H, Ferrell M, Mellado M, Macchietto M, Verheggen K, Edelmann M, Ezkurdia I, Vazquez J, Tress M, Mortazavi A, Martens L, Rodriguez-Navarro S, Moreno-Manzano V, Conesa A.

Genome Res. 2018 Feb 9. doi: 10.1101/gr.222976.117. [Epub ahead of print] Erratum in: Genome Res. 2018 Jul;28(7):1096.

34.

TCF7L1 suppresses primitive streak gene expression to support human embryonic stem cell pluripotency.

Sierra RA, Hoverter NP, Ramirez RN, Vuong LM, Mortazavi A, Merrill BJ, Waterman ML, Donovan PJ.

Development. 2018 Feb 23;145(4). pii: dev161075. doi: 10.1242/dev.161075.

35.

Wound Regeneration Deficit in Rats Correlates with Low Morphogenetic Potential and Distinct Transcriptome Profile of Epidermis.

Guerrero-Juarez CF, Astrowski AA, Murad R, Dang CT, Shatrova VO, Astrowskaja A, Lim CH, Ramos R, Wang X, Liu Y, Lee HL, Pham KT, Hsi TC, Oh JW, Crocker D, Mortazavi A, Ito M, Plikus MV.

J Invest Dermatol. 2018 Jun;138(6):1409-1419. doi: 10.1016/j.jid.2017.12.030. Epub 2018 Jan 6.

36.

A Potential Role for Adjuvant Chemotherapy and Radiotherapy for Patients With High-Risk Bladder Cancer Treated With Cystectomy in the United States.

Diaz DA, Mortazavi A, Lee CT.

JAMA Surg. 2018 Jan 17;153(1):e174592. doi: 10.1001/jamasurg.2017.4592. Epub 2018 Jan 17. No abstract available.

PMID:
29188276
37.

Quantitative Assessment of Heterogeneity in Bladder Tumor MRI Diffusivity: Can Response be Predicted Prior to Neoadjuvant Chemotherapy?

Nguyen HT, Mortazavi A, Pohar KS, Zynger DL, Wei L, Shah ZK, Jia G, Knopp MV.

Bladder Cancer. 2017 Oct 27;3(4):237-244. doi: 10.3233/BLC-170110.

38.

Analytic validation and real-time clinical application of an amplicon-based targeted gene panel for advanced cancer.

Wing MR, Reeser JW, Smith AM, Reeder M, Martin D, Jewell BM, Datta J, Miya J, Monk JP, Mortazavi A, Otterson GA, Goldberg RM, VanDeusen JB, Cole S, Dittmar K, Jaiswal S, Kinzie M, Waikhom S, Freud AG, Zhou XP, Chen W, Bhatt D, Roychowdhury S.

Oncotarget. 2017 Sep 1;8(44):75822-75833. doi: 10.18632/oncotarget.20616. eCollection 2017 Sep 29.

39.

Comprehensive phylogeny of acariform mites (Acariformes) provides insights on the origin of the four-legged mites (Eriophyoidea), a long branch.

Klimov PB, OConnor BM, Chetverikov PE, Bolton SJ, Pepato AR, Mortazavi AL, Tolstikov AV, Bauchan GR, Ochoa R.

Mol Phylogenet Evol. 2018 Feb;119:105-117. doi: 10.1016/j.ympev.2017.10.017. Epub 2017 Oct 23.

40.

Comparative Transcriptomics of Steinernema and Caenorhabditis Single Embryos Reveals Orthologous Gene Expression Convergence during Late Embryogenesis.

Macchietto M, Angdembey D, Heidarpour N, Serra L, Rodriguez B, El-Ali N, Mortazavi A.

Genome Biol Evol. 2017 Oct 1;9(10):2681-2696. doi: 10.1093/gbe/evx195.

41.

Prostaglandin E2 Leads to the Acquisition of DNMT3A-Dependent Tolerogenic Functions in Human Myeloid-Derived Suppressor Cells.

Rodríguez-Ubreva J, Català-Moll F, Obermajer N, Álvarez-Errico D, Ramirez RN, Company C, Vento-Tormo R, Moreno-Bueno G, Edwards RP, Mortazavi A, Kalinski P, Ballestar E.

Cell Rep. 2017 Oct 3;21(1):154-167. doi: 10.1016/j.celrep.2017.09.018.

42.

Prevention of C5aR1 signaling delays microglial inflammatory polarization, favors clearance pathways and suppresses cognitive loss.

Hernandez MX, Jiang S, Cole TA, Chu SH, Fonseca MI, Fang MJ, Hohsfield LA, Torres MD, Green KN, Wetsel RA, Mortazavi A, Tenner AJ.

Mol Neurodegener. 2017 Sep 18;12(1):66. doi: 10.1186/s13024-017-0210-z.

43.

Redescription of Eutarsopolipus elongatus Regenfuss, 1968 (Acari: Podapolipidae) parasitising carabid beetles, with first description of the male.

Sobhi M, Hajiqanbar H, Mortazavi A.

Acta Parasitol. 2017 Sep 26;62(3):597-605. doi: 10.1515/ap-2017-0072.

PMID:
28682758
44.

Bcl11b and combinatorial resolution of cell fate in the T-cell gene regulatory network.

Longabaugh WJR, Zeng W, Zhang JA, Hosokawa H, Jansen CS, Li L, Romero-Wolf M, Liu P, Kueh HY, Mortazavi A, Rothenberg EV.

Proc Natl Acad Sci U S A. 2017 Jun 6;114(23):5800-5807. doi: 10.1073/pnas.1610617114.

45.

Management of Hepatic Granulomatous Tuberculosis After BCG Therapy for Bladder Cancer.

Ayati M, Nowroozi MR, Mortazavi A, Ohadian Moghadam S, Ghorani H.

Urol Case Rep. 2017 May 25;13:158-159. doi: 10.1016/j.eucr.2017.04.011. eCollection 2017 Jul.

46.

iPSC-Derived Human Microglia-like Cells to Study Neurological Diseases.

Abud EM, Ramirez RN, Martinez ES, Healy LM, Nguyen CHH, Newman SA, Yeromin AV, Scarfone VM, Marsh SE, Fimbres C, Caraway CA, Fote GM, Madany AM, Agrawal A, Kayed R, Gylys KH, Cahalan MD, Cummings BJ, Antel JP, Mortazavi A, Carson MJ, Poon WW, Blurton-Jones M.

Neuron. 2017 Apr 19;94(2):278-293.e9. doi: 10.1016/j.neuron.2017.03.042.

47.

Activated entomopathogenic nematode infective juveniles release lethal venom proteins.

Lu D, Macchietto M, Chang D, Barros MM, Baldwin J, Mortazavi A, Dillman AR.

PLoS Pathog. 2017 Apr 20;13(4):e1006302. doi: 10.1371/journal.ppat.1006302. eCollection 2017 Apr.

48.

Dynamic Gene Regulatory Networks of Human Myeloid Differentiation.

Ramirez RN, El-Ali NC, Mager MA, Wyman D, Conesa A, Mortazavi A.

Cell Syst. 2017 Apr 26;4(4):416-429.e3. doi: 10.1016/j.cels.2017.03.005. Epub 2017 Mar 29.

49.

A phase 1 trial of the HDAC inhibitor AR-42 in patients with multiple myeloma and T- and B-cell lymphomas.

Sborov DW, Canella A, Hade EM, Mo X, Khountham S, Wang J, Ni W, Poi M, Coss C, Liu Z, Phelps MA, Mortazavi A, Andritsos L, Baiocchi RA, Christian BA, Benson DM, Flynn J, Porcu P, Byrd JC, Pichiorri F, Hofmeister CC.

Leuk Lymphoma. 2017 Oct;58(10):2310-2318. doi: 10.1080/10428194.2017.1298751. Epub 2017 Mar 7.

50.

The impact of cruciferous vegetable isothiocyanates on histone acetylation and histone phosphorylation in bladder cancer.

Abbaoui B, Telu KH, Lucas CR, Thomas-Ahner JM, Schwartz SJ, Clinton SK, Freitas MA, Mortazavi A.

J Proteomics. 2017 Mar 6;156:94-103. doi: 10.1016/j.jprot.2017.01.013. Epub 2017 Jan 27.

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