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Items: 10

1.

Profiling grapevine trunk pathogens in planta: a case for community-targeted DNA metabarcoding.

Morales-Cruz A, Figueroa-Balderas R, García JF, Tran E, Rolshausen PE, Baumgartner K, Cantu D.

BMC Microbiol. 2018 Dec 14;18(1):214. doi: 10.1186/s12866-018-1343-0.

2.

Whole-Genome Resequencing and Pan-Transcriptome Reconstruction Highlight the Impact of Genomic Structural Variation on Secondary Metabolite Gene Clusters in the Grapevine Esca Pathogen Phaeoacremonium minimum.

Massonnet M, Morales-Cruz A, Minio A, Figueroa-Balderas R, Lawrence DP, Travadon R, Rolshausen PE, Baumgartner K, Cantu D.

Front Microbiol. 2018 Aug 13;9:1784. doi: 10.3389/fmicb.2018.01784. eCollection 2018.

3.

Lipopolysaccharide O-antigen delays plant innate immune recognition of Xylella fastidiosa.

Rapicavoli JN, Blanco-Ulate B, Muszyński A, Figueroa-Balderas R, Morales-Cruz A, Azadi P, Dobruchowska JM, Castro C, Cantu D, Roper MC.

Nat Commun. 2018 Jan 26;9(1):390. doi: 10.1038/s41467-018-02861-5.

4.

Closed-reference metatranscriptomics enables in planta profiling of putative virulence activities in the grapevine trunk disease complex.

Morales-Cruz A, Allenbeck G, Figueroa-Balderas R, Ashworth VE, Lawrence DP, Travadon R, Smith RJ, Baumgartner K, Rolshausen PE, Cantu D.

Mol Plant Pathol. 2018 Feb;19(2):490-503. doi: 10.1111/mpp.12544. Epub 2017 Mar 26.

5.

Phased diploid genome assembly with single-molecule real-time sequencing.

Chin CS, Peluso P, Sedlazeck FJ, Nattestad M, Concepcion GT, Clum A, Dunn C, O'Malley R, Figueroa-Balderas R, Morales-Cruz A, Cramer GR, Delledonne M, Luo C, Ecker JR, Cantu D, Rank DR, Schatz MC.

Nat Methods. 2016 Dec;13(12):1050-1054. doi: 10.1038/nmeth.4035. Epub 2016 Oct 17.

6.

Condition-dependent co-regulation of genomic clusters of virulence factors in the grapevine trunk pathogen Neofusicoccum parvum.

Massonnet M, Morales-Cruz A, Figueroa-Balderas R, Lawrence DP, Baumgartner K, Cantu D.

Mol Plant Pathol. 2018 Jan;19(1):21-34. doi: 10.1111/mpp.12491. Epub 2016 Dec 4.

7.

Developmental and Metabolic Plasticity of White-Skinned Grape Berries in Response to Botrytis cinerea during Noble Rot.

Blanco-Ulate B, Amrine KC, Collins TS, Rivero RM, Vicente AR, Morales-Cruz A, Doyle CL, Ye Z, Allen G, Heymann H, Ebeler SE, Cantu D.

Plant Physiol. 2015 Dec;169(4):2422-43. doi: 10.1104/pp.15.00852. Epub 2015 Oct 8.

8.

Distinctive expansion of gene families associated with plant cell wall degradation, secondary metabolism, and nutrient uptake in the genomes of grapevine trunk pathogens.

Morales-Cruz A, Amrine KC, Blanco-Ulate B, Lawrence DP, Travadon R, Rolshausen PE, Baumgartner K, Cantu D.

BMC Genomics. 2015 Jun 19;16:469. doi: 10.1186/s12864-015-1624-z.

9.

Adaptive genomic structural variation in the grape powdery mildew pathogen, Erysiphe necator.

Jones L, Riaz S, Morales-Cruz A, Amrine KC, McGuire B, Gubler WD, Walker MA, Cantu D.

BMC Genomics. 2014 Dec 9;15:1081. doi: 10.1186/1471-2164-15-1081.

10.

Genome-wide transcriptional profiling of Botrytis cinerea genes targeting plant cell walls during infections of different hosts.

Blanco-Ulate B, Morales-Cruz A, Amrine KC, Labavitch JM, Powell AL, Cantu D.

Front Plant Sci. 2014 Sep 3;5:435. doi: 10.3389/fpls.2014.00435. eCollection 2014.

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