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Transcriptomic Analysis of Trichoderma atroviride Overgrowing Plant-Wilting Verticillium dahliae Reveals the Role of a New M14 Metallocarboxypeptidase CPA1 in Biocontrol.

Morán-Diez ME, Carrero-Carrón I, Rubio MB, Jiménez-Díaz RM, Monte E, Hermosa R.

Front Microbiol. 2019 May 27;10:1120. doi: 10.3389/fmicb.2019.01120. eCollection 2019.


Extrachloroplastic PP7L Functions in Chloroplast Development and Abiotic Stress Tolerance.

Xu D, Marino G, Klingl A, Enderle B, Monte E, Kurth J, Hiltbrunner A, Leister D, Kleine T.

Plant Physiol. 2019 May;180(1):323-341. doi: 10.1104/pp.19.00070. Epub 2019 Feb 13.


Bayesian pharmacokinetic-guided prophylaxis with recombinant factor VIII in severe or moderate haemophilia A.

Megías-Vericat JE, Bonanad S, Haya S, Cid AR, Marqués MR, Monte E, Pérez-Alenda S, Bosch P, Querol F, Poveda JL.

Thromb Res. 2019 Feb;174:151-162. doi: 10.1016/j.thromres.2018.12.027. Epub 2019 Jan 3.


Distribution and Genetic Variability of Fusarium oxysporum Associated with Tomato Diseases in Algeria and a Biocontrol Strategy with Indigenous Trichoderma spp.

Debbi A, Boureghda H, Monte E, Hermosa R.

Front Microbiol. 2018 Feb 21;9:282. doi: 10.3389/fmicb.2018.00282. eCollection 2018.


Circadian Waves of Transcriptional Repression Shape PIF-Regulated Photoperiod-Responsive Growth in Arabidopsis.

Martín G, Rovira A, Veciana N, Soy J, Toledo-Ortiz G, Gommers CMM, Boix M, Henriques R, Minguet EG, Alabadí D, Halliday KJ, Leivar P, Monte E.

Curr Biol. 2018 Jan 22;28(2):311-318.e5. doi: 10.1016/j.cub.2017.12.021. Epub 2018 Jan 11.


Seedling Establishment: A Dimmer Switch-Regulated Process between Dark and Light Signaling.

Gommers CMM, Monte E.

Plant Physiol. 2018 Feb;176(2):1061-1074. doi: 10.1104/pp.17.01460. Epub 2017 Dec 7. Review. No abstract available.


Involvement of the Transcriptional Coactivator ThMBF1 in the Biocontrol Activity of Trichoderma harzianum.

Rubio MB, Pardal AJ, Cardoza RE, Gutiérrez S, Monte E, Hermosa R.

Front Microbiol. 2017 Nov 21;8:2273. doi: 10.3389/fmicb.2017.02273. eCollection 2017.


High-Resolution Mapping of Chromatin Conformation in Cardiac Myocytes Reveals Structural Remodeling of the Epigenome in Heart Failure.

Rosa-Garrido M, Chapski DJ, Schmitt AD, Kimball TH, Karbassi E, Monte E, Balderas E, Pellegrini M, Shih TT, Soehalim E, Liem D, Ping P, Galjart NJ, Ren S, Wang Y, Ren B, Vondriska TM.

Circulation. 2017 Oct 24;136(17):1613-1625. doi: 10.1161/CIRCULATIONAHA.117.029430. Epub 2017 Aug 11.


The Munich MIDY Pig Biobank - A unique resource for studying organ crosstalk in diabetes.

Blutke A, Renner S, Flenkenthaler F, Backman M, Haesner S, Kemter E, Ländström E, Braun-Reichhart C, Albl B, Streckel E, Rathkolb B, Prehn C, Palladini A, Grzybek M, Krebs S, Bauersachs S, Bähr A, Brühschwein A, Deeg CA, De Monte E, Dmochewitz M, Eberle C, Emrich D, Fux R, Groth F, Gumbert S, Heitmann A, Hinrichs A, Keßler B, Kurome M, Leipig-Rudolph M, Matiasek K, Öztürk H, Otzdorff C, Reichenbach M, Reichenbach HD, Rieger A, Rieseberg B, Rosati M, Saucedo MN, Schleicher A, Schneider MR, Simmet K, Steinmetz J, Übel N, Zehetmaier P, Jung A, Adamski J, Coskun Ü, Hrabě de Angelis M, Simmet C, Ritzmann M, Meyer-Lindenberg A, Blum H, Arnold GJ, Fröhlich T, Wanke R, Wolf E.

Mol Metab. 2017 Jun 13;6(8):931-940. doi: 10.1016/j.molmet.2017.06.004. eCollection 2017 Aug.


Neural Circuit-Specialized Astrocytes: Transcriptomic, Proteomic, Morphological, and Functional Evidence.

Chai H, Diaz-Castro B, Shigetomi E, Monte E, Octeau JC, Yu X, Cohn W, Rajendran PS, Vondriska TM, Whitelegge JP, Coppola G, Khakh BS.

Neuron. 2017 Aug 2;95(3):531-549.e9. doi: 10.1016/j.neuron.2017.06.029. Epub 2017 Jul 14.


Epigenomic Disruption of Cardiovascular Care: What It Will Take.

Monte E, Fischer MA, Vondriska TM.

Circ Res. 2017 May 26;120(11):1692-1693. doi: 10.1161/CIRCRESAHA.117.311072. No abstract available.


The Combination of Trichoderma harzianum and Chemical Fertilization Leads to the Deregulation of Phytohormone Networking, Preventing the Adaptive Responses of Tomato Plants to Salt Stress.

Rubio MB, Hermosa R, Vicente R, Gómez-Acosta FA, Morcuende R, Monte E, Bettiol W.

Front Plant Sci. 2017 Mar 2;8:294. doi: 10.3389/fpls.2017.00294. eCollection 2017.


Tomato progeny inherit resistance to the nematode Meloidogyne javanica linked to plant growth induced by the biocontrol fungus Trichoderma atroviride.

Medeiros HA, Araújo Filho JV, Freitas LG, Castillo P, Rubio MB, Hermosa R, Monte E.

Sci Rep. 2017 Jan 10;7:40216. doi: 10.1038/srep40216.


Undiscovered Physiology of Transcript and Protein Networks.

Monte E, Rosa-Garrido M, Vondriska TM, Wang J.

Compr Physiol. 2016 Sep 15;6(4):1851-1872. doi: 10.1002/cphy.c160003. Review.


Nitrogen Metabolism and Growth Enhancement in Tomato Plants Challenged with Trichoderma harzianum Expressing the Aspergillus nidulans Acetamidase amdS Gene.

Domínguez S, Rubio MB, Cardoza RE, Gutiérrez S, Nicolás C, Bettiol W, Hermosa R, Monte E.

Front Microbiol. 2016 Aug 3;7:1182. doi: 10.3389/fmicb.2016.01182. eCollection 2016.


Interferon-gamma activity is potentiated by an intracellular peptide derived from the human 19S ATPase regulatory subunit 4 of the proteasome.

Monte ER, Rossato C, Llanos RP, Russo LC, de Castro LM, Gozzo FC, de Araujo CB, Peron JP, Sant'Anna OA, Ferro ES, Rioli V.

J Proteomics. 2017 Jan 16;151:74-82. doi: 10.1016/j.jprot.2016.08.003. Epub 2016 Aug 11.


Genomic Analysis Reveals Contrasting PIFq Contribution to Diurnal Rhythmic Gene Expression in PIF-Induced and -Repressed Genes.

Martin G, Soy J, Monte E.

Front Plant Sci. 2016 Jul 4;7:962. doi: 10.3389/fpls.2016.00962. eCollection 2016.


Trichothecenes and aspinolides produced by Trichoderma arundinaceum regulate expression of Botrytis cinerea genes involved in virulence and growth.

Malmierca MG, Izquierdo-Bueno I, McCormick SP, Cardoza RE, Alexander NJ, Barua J, Lindo L, Casquero PA, Collado IG, Monte E, Gutiérrez S.

Environ Microbiol. 2016 Nov;18(11):3991-4004. doi: 10.1111/1462-2920.13410. Epub 2016 Jul 15.


Relationship of disease-associated gene expression to cardiac phenotype is buffered by genetic diversity and chromatin regulation.

Karbassi E, Monte E, Chapski DJ, Lopez R, Rosa Garrido M, Kim J, Wisniewski N, Rau CD, Wang JJ, Weiss JN, Wang Y, Lusis AJ, Vondriska TM.

Physiol Genomics. 2016 Aug 1;48(8):601-15. doi: 10.1152/physiolgenomics.00035.2016. Epub 2016 Jun 10.


Reciprocal Regulation of the Cardiac Epigenome by Chromatin Structural Proteins Hmgb and Ctcf: IMPLICATIONS FOR TRANSCRIPTIONAL REGULATION.

Monte E, Rosa-Garrido M, Karbassi E, Chen H, Lopez R, Rau CD, Wang J, Nelson SF, Wu Y, Stefani E, Lusis AJ, Wang Y, Kurdistani SK, Franklin S, Vondriska TM.

J Biol Chem. 2016 Jul 22;291(30):15428-46. doi: 10.1074/jbc.M116.719633. Epub 2016 May 16.


Phytochrome and retrograde signalling pathways converge to antagonistically regulate a light-induced transcriptional network.

Martín G, Leivar P, Ludevid D, Tepperman JM, Quail PH, Monte E.

Nat Commun. 2016 May 6;7:11431. doi: 10.1038/ncomms11431.


Molecular convergence of clock and photosensory pathways through PIF3-TOC1 interaction and co-occupancy of target promoters.

Soy J, Leivar P, González-Schain N, Martín G, Diaz C, Sentandreu M, Al-Sady B, Quail PH, Monte E.

Proc Natl Acad Sci U S A. 2016 Apr 26;113(17):4870-5. doi: 10.1073/pnas.1603745113. Epub 2016 Apr 11.


Anti-inflammatory nutritional intervention in patients with relapsing-remitting and primary-progressive multiple sclerosis: A pilot study.

Riccio P, Rossano R, Larocca M, Trotta V, Mennella I, Vitaglione P, Ettorre M, Graverini A, De Santis A, Di Monte E, Coniglio MG.

Exp Biol Med (Maywood). 2016 Mar;241(6):620-35. doi: 10.1177/1535370215618462. Epub 2016 Jan 18.


Not low hanging but still sweet: Metabolic proteomes in cardiovascular disease.

Monte E, Lopez R, Vondriska TM.

J Mol Cell Cardiol. 2016 Jan;90:70-3. doi: 10.1016/j.yjmcc.2015.11.022. Epub 2015 Nov 22.


The importance of chorismate mutase in the biocontrol potential of Trichoderma parareesei.

Pérez E, Rubio MB, Cardoza RE, Gutiérrez S, Bettiol W, Monte E, Hermosa R.

Front Microbiol. 2015 Oct 27;6:1181. doi: 10.3389/fmicb.2015.01181. eCollection 2015.


Botrydial and botcinins produced by Botrytis cinerea regulate the expression of Trichoderma arundinaceum genes involved in trichothecene biosynthesis.

Malmierca MG, Izquierdo-Bueno I, Mccormick SP, Cardoza RE, Alexander NJ, Moraga J, Gomes EV, Proctor RH, Collado IG, Monte E, Gutiérrez S.

Mol Plant Pathol. 2016 Sep;17(7):1017-31. doi: 10.1111/mpp.12343. Epub 2016 Feb 8.


Trichodiene Production in a Trichoderma harzianum erg1-Silenced Strain Provides Evidence of the Importance of the Sterol Biosynthetic Pathway in Inducing Plant Defense-Related Gene Expression.

Malmierca MG, McCormick SP, Cardoza RE, Monte E, Alexander NJ, Gutiérrez S.

Mol Plant Microbe Interact. 2015 Nov;28(11):1181-97. doi: 10.1094/MPMI-06-15-0127-R. Epub 2015 Oct 16.


Effects of Trichothecene Production on the Plant Defense Response and Fungal Physiology: Overexpression of the Trichoderma arundinaceum tri4 Gene in T. harzianum.

Cardoza RE, McCormick SP, Malmierca MG, Olivera ER, Alexander NJ, Monte E, Gutiérrez S.

Appl Environ Microbiol. 2015 Sep;81(18):6355-66. doi: 10.1128/AEM.01626-15. Epub 2015 Jul 6.


Trichoderma genes in plants for stress tolerance- status and prospects.

Nicolás C, Hermosa R, Rubio B, Mukherjee PK, Monte E.

Plant Sci. 2014 Nov;228:71-8. doi: 10.1016/j.plantsci.2014.03.005. Epub 2014 Mar 12. Review.


Epigenomes: the missing heritability in human cardiovascular disease?

Monte E, Vondriska TM.

Proteomics Clin Appl. 2014 Aug;8(7-8):480-7. doi: 10.1002/prca.201400031. Review.


Novel aspinolide production by Trichoderma arundinaceum with a potential role in Botrytis cinerea antagonistic activity and plant defence priming.

Malmierca MG, Barua J, McCormick SP, Izquierdo-Bueno I, Cardoza RE, Alexander NJ, Hermosa R, Collado IG, Monte E, Gutiérrez S.

Environ Microbiol. 2015 Apr;17(4):1103-18. doi: 10.1111/1462-2920.12514. Epub 2014 Jun 25.


Production of trichodiene by Trichoderma harzianum alters the perception of this biocontrol strain by plants and antagonized fungi.

Malmierca MG, McCormick SP, Cardoza RE, Alexander NJ, Monte E, Gutiérrez S.

Environ Microbiol. 2015 Aug;17(8):2628-46. doi: 10.1111/1462-2920.12506. Epub 2014 Jun 3.


A novel intracellular peptide derived from g1/s cyclin d2 induces cell death.

de Araujo CB, Russo LC, Castro LM, Forti FL, do Monte ER, Rioli V, Gozzo FC, Colquhoun A, Ferro ES.

J Biol Chem. 2014 Jun 13;289(24):16711-26. doi: 10.1074/jbc.M113.537118. Epub 2014 Apr 24.


Positive feedback in cardioprotection: can more mechanism lead to translation?

Chapski DJ, Monte E, Vondriska TM.

Circ Res. 2014 Apr 11;114(8):1225-7. doi: 10.1161/CIRCRESAHA.114.303785. No abstract available.


Salicylic acid prevents Trichoderma harzianum from entering the vascular system of roots.

Alonso-Ramírez A, Poveda J, Martín I, Hermosa R, Monte E, Nicolás C.

Mol Plant Pathol. 2014 Oct;15(8):823-31. doi: 10.1111/mpp.12141. Epub 2014 May 7.


PIFs: systems integrators in plant development.

Leivar P, Monte E.

Plant Cell. 2014 Jan;26(1):56-78. doi: 10.1105/tpc.113.120857. Epub 2014 Jan 30. Review.


PIF1 promotes phytochrome-regulated growth under photoperiodic conditions in Arabidopsis together with PIF3, PIF4, and PIF5.

Soy J, Leivar P, Monte E.

J Exp Bot. 2014 Jun;65(11):2925-36. doi: 10.1093/jxb/ert465. Epub 2014 Jan 13.


Identifying beneficial qualities of Trichoderma parareesei for plants.

Rubio MB, Quijada NM, Pérez E, Domínguez S, Monte E, Hermosa R.

Appl Environ Microbiol. 2014 Mar;80(6):1864-73. doi: 10.1128/AEM.03375-13. Epub 2014 Jan 10.


The contribution of Trichoderma to balancing the costs of plant growth and defense.

Hermosa R, Rubio MB, Cardoza RE, Nicolás C, Monte E, Gutiérrez S.

Int Microbiol. 2013 Jun;16(2):69-80. Review.


Systems proteomics of cardiac chromatin identifies nucleolin as a regulator of growth and cellular plasticity in cardiomyocytes.

Monte E, Mouillesseaux K, Chen H, Kimball T, Ren S, Wang Y, Chen JN, Vondriska TM, Franklin S.

Am J Physiol Heart Circ Physiol. 2013 Dec 1;305(11):H1624-38. doi: 10.1152/ajpheart.00529.2013. Epub 2013 Sep 27.


Comparative functional analysis of full-length and N-terminal fragments of phytochrome C, D and E in red light-induced signaling.

Ádám É, Kircher S, Liu P, Mérai Z, González-Schain N, Hörner M, Viczián A, Monte E, Sharrock RA, Schäfer E, Nagy F.

New Phytol. 2013 Oct;200(1):86-96. doi: 10.1111/nph.12364. Epub 2013 Jun 17.


Systems proteomics of healthy and diseased chromatin.

Chen H, Monte E, Vondriska TM, Franklin S.

Methods Mol Biol. 2013;1005:77-93. doi: 10.1007/978-1-62703-386-2_7. Review.


Regulation of chromatin structure in the cardiovascular system.

Rosa-Garrido M, Karbassi E, Monte E, Vondriska TM.

Circ J. 2013;77(6):1389-98. Epub 2013 Apr 10. Review.


Relevance of trichothecenes in fungal physiology: disruption of tri5 in Trichoderma arundinaceum.

Malmierca MG, Cardoza RE, Alexander NJ, McCormick SP, Collado IG, Hermosa R, Monte E, Gutiérrez S.

Fungal Genet Biol. 2013 Apr;53:22-33. doi: 10.1016/j.fgb.2013.02.001. Epub 2013 Feb 27.


Quantitative analysis of chromatin proteomes in disease.

Monte E, Chen H, Kolmakova M, Parvatiyar M, Vondriska TM, Franklin S.

J Vis Exp. 2012 Dec 28;(70). pii: 4294. doi: 10.3791/4294.


Structural considerations for chromatin state models with transcription as a functional readout.

Chen H, Monte E, Parvatiyar MS, Rosa-Garrido M, Franklin S, Vondriska TM.

FEBS Lett. 2012 Oct 19;586(20):3548-54. doi: 10.1016/j.febslet.2012.08.018. Epub 2012 Aug 31.


Involvement of Trichoderma trichothecenes in the biocontrol activity and induction of plant defense-related genes.

Malmierca MG, Cardoza RE, Alexander NJ, McCormick SP, Hermosa R, Monte E, Gutiérrez S.

Appl Environ Microbiol. 2012 Jul;78(14):4856-68. doi: 10.1128/AEM.00385-12. Epub 2012 May 4.


Dynamic antagonism between phytochromes and PIF family basic helix-loop-helix factors induces selective reciprocal responses to light and shade in a rapidly responsive transcriptional network in Arabidopsis.

Leivar P, Tepperman JM, Cohn MM, Monte E, Al-Sady B, Erickson E, Quail PH.

Plant Cell. 2012 Apr;24(4):1398-419. doi: 10.1105/tpc.112.095711. Epub 2012 Apr 18.


Branching of the PIF3 regulatory network in Arabidopsis: roles of PIF3-regulated MIDAs in seedling development in the dark and in response to light.

Sentandreu M, Leivar P, Martín G, Monte E.

Plant Signal Behav. 2012 Apr;7(4):510-3. doi: 10.4161/psb.19339. Epub 2012 Apr 1.


Phytochrome signaling in green Arabidopsis seedlings: impact assessment of a mutually negative phyB-PIF feedback loop.

Leivar P, Monte E, Cohn MM, Quail PH.

Mol Plant. 2012 May;5(3):734-49. doi: 10.1093/mp/sss031. Epub 2012 Apr 5.

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