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Items: 42

1.

New antimicrobials targeting bacterial RNA polymerase holoenzyme assembly identified with an in vivo BRET-based discovery platform.

Sartini S, Levati E, Maccesi M, Guerra M, Spadoni G, Bach S, Benincasa M, Scocchi M, Ottonello S, Rivara S, Montanini B.

ACS Chem Biol. 2019 Jul 16. doi: 10.1021/acschembio.9b00178. [Epub ahead of print]

PMID:
31310497
2.

Alu RNA Modulates the Expression of Cell Cycle Genes in Human Fibroblasts.

Cantarella S, Carnevali D, Morselli M, Conti A, Pellegrini M, Montanini B, Dieci G.

Int J Mol Sci. 2019 Jul 5;20(13). pii: E3315. doi: 10.3390/ijms20133315.

3.

Identification and first characterization of DinJ-YafQ toxin-antitoxin systems in Lactobacillus species of biotechnological interest.

Ferrari A, Maggi S, Montanini B, Levante A, Lazzi C, Yamaguchi Y, Rivetti C, Folli C.

Sci Rep. 2019 May 21;9(1):7645. doi: 10.1038/s41598-019-44094-6.

4.

Correction: Identification of an early transcriptomic signature of insulin resistance and related diseases in lymphomonocytes of healthy subjects.

Matone A, Derlindati E, Marchetti L, Spigoni V, Dei Cas A, Montanini B, Ardigò D, Zavaroni I, Priami C, Bonadonna RC.

PLoS One. 2019 Jan 23;14(1):e0211394. doi: 10.1371/journal.pone.0211394. eCollection 2019.

5.

Pezizomycetes genomes reveal the molecular basis of ectomycorrhizal truffle lifestyle.

Murat C, Payen T, Noel B, Kuo A, Morin E, Chen J, Kohler A, Krizsán K, Balestrini R, Da Silva C, Montanini B, Hainaut M, Levati E, Barry KW, Belfiori B, Cichocki N, Clum A, Dockter RB, Fauchery L, Guy J, Iotti M, Le Tacon F, Lindquist EA, Lipzen A, Malagnac F, Mello A, Molinier V, Miyauchi S, Poulain J, Riccioni C, Rubini A, Sitrit Y, Splivallo R, Traeger S, Wang M, Žifčáková L, Wipf D, Zambonelli A, Paolocci F, Nowrousian M, Ottonello S, Baldrian P, Spatafora JW, Henrissat B, Nagy LG, Aury JM, Wincker P, Grigoriev IV, Bonfante P, Martin FM.

Nat Ecol Evol. 2018 Dec;2(12):1956-1965. doi: 10.1038/s41559-018-0710-4. Epub 2018 Nov 12.

6.

Author Correction: A family of archaea-like carboxylesterases preferentially expressed in the symbiotic phase of the mycorrhizal fungus Tuber melanosporum.

Cavazzini D, Grossi G, Levati E, Vallese F, Montanini B, Bolchi A, Zanotti G, Ottonello S.

Sci Rep. 2018 Aug 29;8(1):13173. doi: 10.1038/s41598-018-29606-0.

7.

Regulatory networks underlying mycorrhizal development delineated by genome-wide expression profiling and functional analysis of the transcription factor repertoire of the plant symbiotic fungus Laccaria bicolor.

Daguerre Y, Levati E, Ruytinx J, Tisserant E, Morin E, Kohler A, Montanini B, Ottonello S, Brun A, Veneault-Fourrey C, Martin F.

BMC Genomics. 2017 Sep 18;18(1):737. doi: 10.1186/s12864-017-4114-7.

8.

Correction: In vivo targeting of de novo DNA methylation by histone modifications in yeast and mouse.

Morselli M, Pastor WA, Montanini B, Nee K, Ferrari R, Fu K, Bonora G, Rubbi L, Clark AT, Ottonello S, Jacobsen SE, Pellegrini M.

Elife. 2017 Aug 31;6. pii: e30948. doi: 10.7554/eLife.30948. No abstract available.

9.

A family of archaea-like carboxylesterases preferentially expressed in the symbiotic phase of the mychorrizal fungus Tuber melanosporum.

Cavazzini D, Grossi G, Levati E, Vallese F, Montanini B, Bolchi A, Zanotti G, Ottonello S.

Sci Rep. 2017 Aug 9;7(1):7628. doi: 10.1038/s41598-017-08007-9. Erratum in: Sci Rep. 2018 Aug 29;8(1):13173.

10.

Identification of an early transcriptomic signature of insulin resistance and related diseases in lymphomonocytes of healthy subjects.

Matone A, Derlindati E, Marchetti L, Spigoni V, Dei Cas A, Montanini B, Ardigò D, Zavaroni I, Priami C, Bonadonna RC.

PLoS One. 2017 Aug 4;12(8):e0182559. doi: 10.1371/journal.pone.0182559. eCollection 2017. Erratum in: PLoS One. 2019 Jan 23;14(1):e0211394.

11.

Screening for Protein-Protein Interaction Inhibitors Using a Bioluminescence Resonance Energy Transfer (BRET)-Based Assay in Yeast.

Corbel C, Sartini S, Levati E, Colas P, Maillet L, Couturier C, Montanini B, Bach S.

SLAS Discov. 2017 Jul;22(6):751-759. doi: 10.1177/2472555216689530. Epub 2017 Jan 31.

PMID:
28346092
12.

Photoreceptors in the dark: A functional white collar-like complex and other putative light-sensing components encoded by the genome of the subterranean fungus Tuber melanosporum.

Gerace R, Montanini B, Proietto M, Levati E, De Luca C, Brenna A, Filetici P, Kohler A, Ottonello S, Ballario P.

Fungal Biol. 2017 Mar;121(3):253-263. doi: 10.1016/j.funbio.2016.12.003. Epub 2017 Jan 5.

PMID:
28215352
13.

Targeting mitochondrial dysfunction can restore antiviral activity of exhausted HBV-specific CD8 T cells in chronic hepatitis B.

Fisicaro P, Barili V, Montanini B, Acerbi G, Ferracin M, Guerrieri F, Salerno D, Boni C, Massari M, Cavallo MC, Grossi G, Giuberti T, Lampertico P, Missale G, Levrero M, Ottonello S, Ferrari C.

Nat Med. 2017 Mar;23(3):327-336. doi: 10.1038/nm.4275. Epub 2017 Feb 6.

PMID:
28165481
14.

A metaproteomic approach dissecting major bacterial functions in the rhizosphere of plants living in serpentine soil.

Mattarozzi M, Manfredi M, Montanini B, Gosetti F, Sanangelantoni AM, Marengo E, Careri M, Visioli G.

Anal Bioanal Chem. 2017 Mar;409(9):2327-2339. doi: 10.1007/s00216-016-0175-8. Epub 2017 Jan 12.

PMID:
28083663
15.

Dry and wet approaches for genome-wide functional annotation of conventional and unconventional transcriptional activators.

Levati E, Sartini S, Ottonello S, Montanini B.

Comput Struct Biotechnol J. 2016 Jun 29;14:262-70. doi: 10.1016/j.csbj.2016.06.004. eCollection 2016. Review.

16.

Virus-Mediated Metalloproteinase 1 Induction Revealed by Transcriptome Profiling of Bovine Herpesvirus 4-Infected Bovine Endometrial Stromal Cells.

Tebaldi G, Jacca S, Montanini B, Capra E, Rosamilia A, Sala A, Stella A, Castiglioni B, Ottonello S, Donofrio G.

Biol Reprod. 2016 Jul;95(1):12. doi: 10.1095/biolreprod.116.139097. Epub 2016 Jun 8.

PMID:
27281703
17.

Moonlighting transcriptional activation function of a fungal sulfur metabolism enzyme.

Levati E, Sartini S, Bolchi A, Ottonello S, Montanini B.

Sci Rep. 2016 Apr 28;6:25165. doi: 10.1038/srep25165.

18.

In vivo targeting of de novo DNA methylation by histone modifications in yeast and mouse.

Morselli M, Pastor WA, Montanini B, Nee K, Ferrari R, Fu K, Bonora G, Rubbi L, Clark AT, Ottonello S, Jacobsen SE, Pellegrini M.

Elife. 2015 Apr 7;4:e06205. doi: 10.7554/eLife.06205. Erratum in: Elife. 2017 Aug 31;6:.

19.

Transcriptomic analysis of human polarized macrophages: more than one role of alternative activation?

Derlindati E, Dei Cas A, Montanini B, Spigoni V, Curella V, Aldigeri R, Ardigò D, Zavaroni I, Bonadonna RC.

PLoS One. 2015 Mar 23;10(3):e0119751. doi: 10.1371/journal.pone.0119751. eCollection 2015.

20.

A comprehensive resource of genomic, epigenomic and transcriptomic sequencing data for the black truffle Tuber melanosporum.

Chen PY, Montanini B, Liao WW, Morselli M, Jaroszewicz A, Lopez D, Ottonello S, Pellegrini M.

Gigascience. 2014 Oct 30;3:25. doi: 10.1186/2047-217X-3-25. eCollection 2014.

21.

Non-exhaustive DNA methylation-mediated transposon silencing in the black truffle genome, a complex fungal genome with massive repeat element content.

Montanini B, Chen PY, Morselli M, Jaroszewicz A, Lopez D, Martin F, Ottonello S, Pellegrini M.

Genome Biol. 2014 Jul 31;15(7):411. doi: 10.1186/s13059-014-0411-5.

22.

Integrative gene transfer in the truffle Tuber borchii by Agrobacterium tumefaciens-mediated transformation.

Brenna A, Montanini B, Muggiano E, Proietto M, Filetici P, Ottonello S, Ballario P.

AMB Express. 2014 May 29;4:43. doi: 10.1186/s13568-014-0043-x. eCollection 2014.

23.

Global genome transcription profiling of Bifidobacterium bifidum PRL2010 under in vitro conditions and identification of reference genes for quantitative real-time PCR.

Turroni F, Foroni E, Montanini B, Viappiani A, Strati F, Duranti S, Ferrarini A, Delledonne M, van Sinderen D, Ventura M.

Appl Environ Microbiol. 2011 Dec;77(24):8578-87. doi: 10.1128/AEM.06352-11. Epub 2011 Oct 14.

24.

Ability of Bifidobacterium breve to grow on different types of milk: exploring the metabolism of milk through genome analysis.

Turroni F, Foroni E, Serafini F, Viappiani A, Montanini B, Bottacini F, Ferrarini A, Bacchini PL, Rota C, Delledonne M, Ottonello S, van Sinderen D, Ventura M.

Appl Environ Microbiol. 2011 Oct;77(20):7408-17. doi: 10.1128/AEM.05336-11. Epub 2011 Aug 19.

25.

Tapping genomics to unravel ectomycorrhizal symbiosis.

Plett JM, Montanini B, Kohler A, Ottonello S, Martin F.

Methods Mol Biol. 2011;722:249-81. doi: 10.1007/978-1-61779-040-9_19.

PMID:
21590427
26.

Structure-function analysis of a CVNH-LysM lectin expressed during plant infection by the rice blast fungus Magnaporthe oryzae.

Koharudin LM, Viscomi AR, Montanini B, Kershaw MJ, Talbot NJ, Ottonello S, Gronenborn AM.

Structure. 2011 May 11;19(5):662-74. doi: 10.1016/j.str.2011.03.004.

27.

Genome-wide search and functional identification of transcription factors in the mycorrhizal fungus Tuber melanosporum.

Montanini B, Levati E, Bolchi A, Kohler A, Morin E, Tisserant E, Martin F, Ottonello S.

New Phytol. 2011 Feb;189(3):736-50. doi: 10.1111/j.1469-8137.2010.03525.x. Epub 2010 Nov 8.

28.

Genome-wide analysis of plant metal transporters, with an emphasis on poplar.

Migeon A, Blaudez D, Wilkins O, Montanini B, Campbell MM, Richaud P, Thomine S, Chalot M.

Cell Mol Life Sci. 2010 Nov;67(22):3763-84. doi: 10.1007/s00018-010-0445-0. Epub 2010 Jul 11. Review.

PMID:
20623158
29.

Périgord black truffle genome uncovers evolutionary origins and mechanisms of symbiosis.

Martin F, Kohler A, Murat C, Balestrini R, Coutinho PM, Jaillon O, Montanini B, Morin E, Noel B, Percudani R, Porcel B, Rubini A, Amicucci A, Amselem J, Anthouard V, Arcioni S, Artiguenave F, Aury JM, Ballario P, Bolchi A, Brenna A, Brun A, Buée M, Cantarel B, Chevalier G, Couloux A, Da Silva C, Denoeud F, Duplessis S, Ghignone S, Hilselberger B, Iotti M, Marçais B, Mello A, Miranda M, Pacioni G, Quesneville H, Riccioni C, Ruotolo R, Splivallo R, Stocchi V, Tisserant E, Viscomi AR, Zambonelli A, Zampieri E, Henrissat B, Lebrun MH, Paolocci F, Bonfante P, Ottonello S, Wincker P.

Nature. 2010 Apr 15;464(7291):1033-8. doi: 10.1038/nature08867. Epub 2010 Mar 28.

PMID:
20348908
30.

Eukaryotic snoRNAs: a paradigm for gene expression flexibility.

Dieci G, Preti M, Montanini B.

Genomics. 2009 Aug;94(2):83-8. doi: 10.1016/j.ygeno.2009.05.002. Epub 2009 May 13. Review.

31.

The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis.

Martin F, Aerts A, Ahrén D, Brun A, Danchin EG, Duchaussoy F, Gibon J, Kohler A, Lindquist E, Pereda V, Salamov A, Shapiro HJ, Wuyts J, Blaudez D, Buée M, Brokstein P, Canbäck B, Cohen D, Courty PE, Coutinho PM, Delaruelle C, Detter JC, Deveau A, DiFazio S, Duplessis S, Fraissinet-Tachet L, Lucic E, Frey-Klett P, Fourrey C, Feussner I, Gay G, Grimwood J, Hoegger PJ, Jain P, Kilaru S, Labbé J, Lin YC, Legué V, Le Tacon F, Marmeisse R, Melayah D, Montanini B, Muratet M, Nehls U, Niculita-Hirzel H, Oudot-Le Secq MP, Peter M, Quesneville H, Rajashekar B, Reich M, Rouhier N, Schmutz J, Yin T, Chalot M, Henrissat B, Kües U, Lucas S, Van de Peer Y, Podila GK, Polle A, Pukkila PJ, Richardson PM, Rouzé P, Sanders IR, Stajich JE, Tunlid A, Tuskan G, Grigoriev IV.

Nature. 2008 Mar 6;452(7183):88-92. doi: 10.1038/nature06556.

PMID:
18322534
32.

A secretory pathway-localized cation diffusion facilitator confers plant manganese tolerance.

Peiter E, Montanini B, Gobert A, Pedas P, Husted S, Maathuis FJ, Blaudez D, Chalot M, Sanders D.

Proc Natl Acad Sci U S A. 2007 May 15;104(20):8532-7. Epub 2007 May 9.

33.
34.

The expanded family of ammonium transporters in the perennial poplar plant.

Couturier J, Montanini B, Martin F, Brun A, Blaudez D, Chalot M.

New Phytol. 2007;174(1):137-50.

35.

A threonine synthase homolog from a mammalian genome.

Donini S, Percudani R, Credali A, Montanini B, Sartori A, Peracchi A.

Biochem Biophys Res Commun. 2006 Dec 1;350(4):922-8. Epub 2006 Sep 29.

PMID:
17034760
36.

The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).

Tuskan GA, Difazio S, Jansson S, Bohlmann J, Grigoriev I, Hellsten U, Putnam N, Ralph S, Rombauts S, Salamov A, Schein J, Sterck L, Aerts A, Bhalerao RR, Bhalerao RP, Blaudez D, Boerjan W, Brun A, Brunner A, Busov V, Campbell M, Carlson J, Chalot M, Chapman J, Chen GL, Cooper D, Coutinho PM, Couturier J, Covert S, Cronk Q, Cunningham R, Davis J, Degroeve S, Déjardin A, Depamphilis C, Detter J, Dirks B, Dubchak I, Duplessis S, Ehlting J, Ellis B, Gendler K, Goodstein D, Gribskov M, Grimwood J, Groover A, Gunter L, Hamberger B, Heinze B, Helariutta Y, Henrissat B, Holligan D, Holt R, Huang W, Islam-Faridi N, Jones S, Jones-Rhoades M, Jorgensen R, Joshi C, Kangasjärvi J, Karlsson J, Kelleher C, Kirkpatrick R, Kirst M, Kohler A, Kalluri U, Larimer F, Leebens-Mack J, Leplé JC, Locascio P, Lou Y, Lucas S, Martin F, Montanini B, Napoli C, Nelson DR, Nelson C, Nieminen K, Nilsson O, Pereda V, Peter G, Philippe R, Pilate G, Poliakov A, Razumovskaya J, Richardson P, Rinaldi C, Ritland K, Rouzé P, Ryaboy D, Schmutz J, Schrader J, Segerman B, Shin H, Siddiqui A, Sterky F, Terry A, Tsai CJ, Uberbacher E, Unneberg P, Vahala J, Wall K, Wessler S, Yang G, Yin T, Douglas C, Marra M, Sandberg G, Van de Peer Y, Rokhsar D.

Science. 2006 Sep 15;313(5793):1596-604.

37.

Gene expression profiling of the nitrogen starvation stress response in the mycorrhizal ascomycete Tuber borchii.

Montanini B, Gabella S, Abbà S, Peter M, Kohler A, Bonfante P, Chalot M, Martin F, Ottonello S.

Fungal Genet Biol. 2006 Sep;43(9):630-41. Epub 2006 May 15.

PMID:
16698294
38.

Functional properties and differential mode of regulation of the nitrate transporter from a plant symbiotic ascomycete.

Montanini B, Viscomi AR, Bolchi A, Martin Y, Siverio JM, Balestrini R, Bonfante P, Ottonello S.

Biochem J. 2006 Feb 15;394(Pt 1):125-34.

39.

Transcript profiling reveals novel marker genes involved in fruiting body formation in Tuber borchii.

Gabella S, Abbà S, Duplessis S, Montanini B, Martin F, Bonfante P.

Eukaryot Cell. 2005 Sep;4(9):1599-602.

40.

The anti-HIV cyanovirin-N domain is evolutionarily conserved and occurs as a protein module in eukaryotes.

Percudani R, Montanini B, Ottonello S.

Proteins. 2005 Sep 1;60(4):670-8.

PMID:
16003744
41.

Distinctive properties and expression profiles of glutamine synthetase from a plant symbiotic fungus.

Montanini B, Betti M, Márquez AJ, Balestrini R, Bonfante P, Ottonello S.

Biochem J. 2003 Jul 15;373(Pt 2):357-68.

42.

A high-affinity ammonium transporter from the mycorrhizal ascomycete Tuber borchii.

Montanini B, Moretto N, Soragni E, Percudani R, Ottonello S.

Fungal Genet Biol. 2002 Jun;36(1):22-34.

PMID:
12051892

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