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Items: 1 to 50 of 127

1.

Catabolism of Alkylphenols in Rhodococcus via a Meta-Cleavage Pathway Associated With Genomic Islands.

Levy-Booth DJ, Fetherolf MM, Stewart GR, Liu J, Eltis LD, Mohn WW.

Front Microbiol. 2019 Aug 20;10:1862. doi: 10.3389/fmicb.2019.01862. eCollection 2019.

2.

Reduced genetic potential for butyrate fermentation in the gut microbiome of infants who develop allergic sensitization.

Cait A, Cardenas E, Dimitriu PA, Amenyogbe N, Dai D, Cait J, Sbihi H, Stiemsma L, Subbarao P, Mandhane PJ, Becker AB, Moraes TJ, Sears MR, Lefebvre DL, Azad MB, Kollmann T, Turvey SE, Mohn WW.

J Allergy Clin Immunol. 2019 Jul 3. pii: S0091-6749(19)30891-7. doi: 10.1016/j.jaci.2019.06.029. [Epub ahead of print]

PMID:
31279007
3.

New Insights into the Intrinsic and Extrinsic Factors That Shape the Human Skin Microbiome.

Dimitriu PA, Iker B, Malik K, Leung H, Mohn WW, Hillebrand GG.

MBio. 2019 Jul 2;10(4). pii: e00839-19. doi: 10.1128/mBio.00839-19.

4.

IL-22 Preserves Gut Epithelial Integrity and Promotes Disease Remission during Chronic Salmonella Infection.

Lo BC, Shin SB, Canals Hernaez D, Refaeli I, Yu HB, Goebeler V, Cait A, Mohn WW, Vallance BA, McNagny KM.

J Immunol. 2019 Feb 1;202(3):956-965. doi: 10.4049/jimmunol.1801308. Epub 2019 Jan 7.

PMID:
30617224
5.

Association between the intestinal microbiota and allergic sensitization, eczema, and asthma: A systematic review.

Zimmermann P, Messina N, Mohn WW, Finlay BB, Curtis N.

J Allergy Clin Immunol. 2019 Feb;143(2):467-485. doi: 10.1016/j.jaci.2018.09.025. Epub 2018 Dec 29.

PMID:
30600099
6.

Seasonal and ecohydrological regulation of active microbial populations involved in DOC, CO2, and CH4 fluxes in temperate rainforest soil.

Levy-Booth DJ, Giesbrecht IJW, Kellogg CTE, Heger TJ, D'Amore DV, Keeling PJ, Hallam SJ, Mohn WW.

ISME J. 2019 Apr;13(4):950-963. doi: 10.1038/s41396-018-0334-3. Epub 2018 Dec 11.

7.

Bacterial contributions to delignification and lignocellulose degradation in forest soils with metagenomic and quantitative stable isotope probing.

Wilhelm RC, Singh R, Eltis LD, Mohn WW.

ISME J. 2019 Feb;13(2):413-429. doi: 10.1038/s41396-018-0279-6. Epub 2018 Sep 26.

8.

Effects of timber harvesting on the genetic potential for carbon and nitrogen cycling in five North American forest ecozones.

Cardenas E, Orellana LH, Konstantinidis KT, Mohn WW.

Sci Rep. 2018 Feb 16;8(1):3142. doi: 10.1038/s41598-018-21197-0.

9.

High-throughput environmental sequencing reveals high diversity of litter and moss associated protist communities along a gradient of drainage and tree productivity.

Heger TJ, Giesbrecht IJW, Gustavsen J, Del Campo J, Kellogg CTE, Hoffman KM, Lertzman K, Mohn WW, Keeling PJ.

Environ Microbiol. 2018 Mar;20(3):1185-1203. doi: 10.1111/1462-2920.14061. Epub 2018 Mar 12.

PMID:
29417706
10.

Metagenomes Reveal Global Distribution of Bacterial Steroid Catabolism in Natural, Engineered, and Host Environments.

Holert J, Cardenas E, Bergstrand LH, Zaikova E, Hahn AS, Hallam SJ, Mohn WW.

MBio. 2018 Jan 30;9(1). pii: e02345-17. doi: 10.1128/mBio.02345-17.

11.

Microbiome-driven allergic lung inflammation is ameliorated by short-chain fatty acids.

Cait A, Hughes MR, Antignano F, Cait J, Dimitriu PA, Maas KR, Reynolds LA, Hacker L, Mohr J, Finlay BB, Zaph C, McNagny KM, Mohn WW.

Mucosal Immunol. 2018 May;11(3):785-795. doi: 10.1038/mi.2017.75. Epub 2017 Oct 25.

PMID:
29067994
12.

A metagenomic survey of forest soil microbial communities more than a decade after timber harvesting.

Wilhelm RC, Cardenas E, Leung H, Maas K, Hartmann M, Hahn A, Hallam S, Mohn WW.

Sci Data. 2017 Jul 25;4:170092. doi: 10.1038/sdata.2017.92. eCollection 2017.

13.

Biogeography and organic matter removal shape long-term effects of timber harvesting on forest soil microbial communities.

Wilhelm RC, Cardenas E, Maas KR, Leung H, McNeil L, Berch S, Chapman W, Hope G, Kranabetter JM, Dubé S, Busse M, Fleming R, Hazlett P, Webster KL, Morris D, Scott DA, Mohn WW.

ISME J. 2017 Nov;11(11):2552-2568. doi: 10.1038/ismej.2017.109. Epub 2017 Jul 28.

14.

Corrigendum: Long-Term Enrichment of Stress-Tolerant Cellulolytic Soil Populations following Timber Harvesting Evidenced by Multi-Omic Stable Isotope Probing.

Wilhelm RC, Cardenas E, Leung H, Szeitz A, Jensen LD, Mohn WW.

Front Microbiol. 2017 Jun 20;8:1170. doi: 10.3389/fmicb.2017.01170. eCollection 2017.

15.

Long-Term Enrichment of Stress-Tolerant Cellulolytic Soil Populations following Timber Harvesting Evidenced by Multi-Omic Stable Isotope Probing.

Wilhelm RC, Cardenas E, Leung H, Szeitz A, Jensen LD, Mohn WW.

Front Microbiol. 2017 Apr 11;8:537. doi: 10.3389/fmicb.2017.00537. eCollection 2017. Erratum in: Front Microbiol. 2017 Jun 20;8:1170.

16.

Transfer of 13 C between paired Douglas-fir seedlings reveals plant kinship effects and uptake of exudates by ectomycorrhizas.

Pickles BJ, Wilhelm R, Asay AK, Hahn AS, Simard SW, Mohn WW.

New Phytol. 2017 Apr;214(1):400-411. doi: 10.1111/nph.14325. Epub 2016 Nov 21.

17.

Shifts in Lachnospira and Clostridium sp. in the 3-month stool microbiome are associated with preschool age asthma.

Stiemsma LT, Arrieta MC, Dimitriu PA, Cheng J, Thorson L, Lefebvre DL, Azad MB, Subbarao P, Mandhane P, Becker A, Sears MR, Kollmann TR; Canadian Healthy Infant Longitudinal Development (CHILD) Study Investigators, Mohn WW, Finlay BB, Turvey SE.

Clin Sci (Lond). 2016 Dec 1;130(23):2199-2207. Epub 2016 Sep 15.

PMID:
27634868
18.

Erratum for Bergstrand et al., Delineation of Steroid-Degrading Microorganisms through Comparative Genomic Analysis.

Bergstrand LH, Cardenas E, Holert J, Van Hamme JD, Mohn WW.

MBio. 2016 Jul 26;7(4). pii: e00865-16. doi: 10.1128/mBio.00865-16. No abstract available.

19.

Delineation of Steroid-Degrading Microorganisms through Comparative Genomic Analysis.

Bergstrand LH, Cardenas E, Holert J, Van Hamme JD, Mohn WW.

MBio. 2016 Mar 8;7(2):e00166. doi: 10.1128/mBio.00166-16. Erratum in: MBio. 2016;7(4). pii: e00865-16. doi: 10.1128/mBio.00865-16.

20.

Stable isotope probing implicates a species of Cortinarius in carbon transfer through ectomycorrhizal fungal mycelial networks in Arctic tundra.

Deslippe JR, Hartmann M, Grayston SJ, Simard SW, Mohn WW.

New Phytol. 2016 Apr;210(2):383-90. doi: 10.1111/nph.13797. Epub 2015 Dec 17. No abstract available.

21.

Early infancy microbial and metabolic alterations affect risk of childhood asthma.

Arrieta MC, Stiemsma LT, Dimitriu PA, Thorson L, Russell S, Yurist-Doutsch S, Kuzeljevic B, Gold MJ, Britton HM, Lefebvre DL, Subbarao P, Mandhane P, Becker A, McNagny KM, Sears MR, Kollmann T; CHILD Study Investigators, Mohn WW, Turvey SE, Finlay BB.

Sci Transl Med. 2015 Sep 30;7(307):307ra152. doi: 10.1126/scitranslmed.aab2271.

PMID:
26424567
22.

Long-term effects of timber harvesting on hemicellulolytic microbial populations in coniferous forest soils.

Leung HT, Maas KR, Wilhelm RC, Mohn WW.

ISME J. 2016 Feb;10(2):363-75. doi: 10.1038/ismej.2015.118. Epub 2015 Aug 14.

23.

The mycobacterial P55 efflux pump is required for optimal growth on cholesterol.

Ramón-García S, Stewart GR, Hui ZK, Mohn WW, Thompson CJ.

Virulence. 2015;6(5):444-8. doi: 10.1080/21505594.2015.1044195.

24.

Host Response to the Lung Microbiome in Chronic Obstructive Pulmonary Disease.

Sze MA, Dimitriu PA, Suzuki M, McDonough JE, Campbell JD, Brothers JF, Erb-Downward JR, Huffnagle GB, Hayashi S, Elliott WM, Cooper J, Sin DD, Lenburg ME, Spira A, Mohn WW, Hogg JC.

Am J Respir Crit Care Med. 2015 Aug 15;192(4):438-45. doi: 10.1164/rccm.201502-0223OC.

25.

Forest harvesting reduces the soil metagenomic potential for biomass decomposition.

Cardenas E, Kranabetter JM, Hope G, Maas KR, Hallam S, Mohn WW.

ISME J. 2015 Nov;9(11):2465-76. doi: 10.1038/ismej.2015.57. Epub 2015 Apr 24.

26.

Non-symbiotic Bradyrhizobium ecotypes dominate North American forest soils.

VanInsberghe D, Maas KR, Cardenas E, Strachan CR, Hallam SJ, Mohn WW.

ISME J. 2015 Nov;9(11):2435-41. doi: 10.1038/ismej.2015.54. Epub 2015 Apr 24.

27.

Local adaptation in migrated interior Douglas-fir seedlings is mediated by ectomycorrhizas and other soil factors.

Pickles BJ, Twieg BD, O'Neill GA, Mohn WW, Simard SW.

New Phytol. 2015 Aug;207(3):858-71. doi: 10.1111/nph.13360. Epub 2015 Mar 10.

28.
29.

Sensitive, Efficient Quantitation of 13C-Enriched Nucleic Acids via Ultrahigh-Performance Liquid Chromatography-Tandem Mass Spectrometry for Applications in Stable Isotope Probing.

Wilhelm R, Szeitz A, Klassen TL, Mohn WW.

Appl Environ Microbiol. 2014 Dec;80(23):7206-11. doi: 10.1128/AEM.02223-14. Epub 2014 Sep 12.

30.

Perinatal antibiotic-induced shifts in gut microbiota have differential effects on inflammatory lung diseases.

Russell SL, Gold MJ, Reynolds LA, Willing BP, Dimitriu P, Thorson L, Redpath SA, Perona-Wright G, Blanchet MR, Mohn WW, Finlay BB, McNagny KM.

J Allergy Clin Immunol. 2015 Jan;135(1):100-9. doi: 10.1016/j.jaci.2014.06.027. Epub 2014 Aug 18.

PMID:
25145536
31.

The essential role of nitrogen limitation in expression of xplA and degradation of hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) in Gordonia sp. strain KTR9.

Zhu SH, Reuther J, Liu J, Crocker FH, Indest KJ, Eltis LD, Mohn WW.

Appl Microbiol Biotechnol. 2015 Jan;99(1):459-67. doi: 10.1007/s00253-014-6013-z. Epub 2014 Aug 22.

PMID:
25142696
32.

Metagenomic scaffolds enable combinatorial lignin transformation.

Strachan CR, Singh R, VanInsberghe D, Ievdokymenko K, Budwill K, Mohn WW, Eltis LD, Hallam SJ.

Proc Natl Acad Sci U S A. 2014 Jul 15;111(28):10143-8. doi: 10.1073/pnas.1401631111. Epub 2014 Jun 30.

33.

Pattern recognition receptor-mediated cytokine response in infants across 4 continents.

Smolen KK, Ruck CE, Fortuno ES 3rd, Ho K, Dimitriu P, Mohn WW, Speert DP, Cooper PJ, Esser M, Goetghebuer T, Marchant A, Kollmann TR.

J Allergy Clin Immunol. 2014 Mar;133(3):818-26.e4. doi: 10.1016/j.jaci.2013.09.038. Epub 2013 Nov 28.

34.

Actinobacterial acyl coenzyme A synthetases involved in steroid side-chain catabolism.

Casabon I, Swain K, Crowe AM, Eltis LD, Mohn WW.

J Bacteriol. 2014 Feb;196(3):579-87. doi: 10.1128/JB.01012-13. Epub 2013 Nov 15.

35.

Rhodococcus jostii porin A (RjpA) functions in cholate uptake.

Somalinga V, Mohn WW.

Appl Environ Microbiol. 2013 Oct;79(19):6191-3. doi: 10.1128/AEM.01242-13. Epub 2013 Jul 26.

36.

Regulation of the KstR2 regulon of Mycobacterium tuberculosis by a cholesterol catabolite.

Casabon I, Zhu SH, Otani H, Liu J, Mohn WW, Eltis LD.

Mol Microbiol. 2013 Sep;89(6):1201-12. doi: 10.1111/mmi.12340. Epub 2013 Aug 14.

37.

Temporal stability of the mouse gut microbiota in relation to innate and adaptive immunity.

Dimitriu PA, Boyce G, Samarakoon A, Hartmann M, Johnson P, Mohn WW.

Environ Microbiol Rep. 2013 Apr;5(2):200-10. doi: 10.1111/j.1758-2229.2012.00393.x. Epub 2012 Oct 8.

PMID:
23584963
38.

Isolation of a substantial proportion of forest soil bacterial communities detected via pyrotag sequencing.

VanInsberghe D, Hartmann M, Stewart GR, Mohn WW.

Appl Environ Microbiol. 2013 Mar;79(6):2096-8. doi: 10.1128/AEM.03112-12. Epub 2013 Jan 11.

39.

Role of nitrogen limitation in transformation of RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine) by Gordonia sp. strain KTR9.

Indest KJ, Hancock DE, Jung CM, Eberly JO, Mohn WW, Eltis LD, Crocker FH.

Appl Environ Microbiol. 2013 Mar;79(5):1746-50. doi: 10.1128/AEM.03905-12. Epub 2012 Dec 28.

40.

Two transporters essential for reassimilation of novel cholate metabolites by Rhodococcus jostii RHA1.

Swain K, Casabon I, Eltis LD, Mohn WW.

J Bacteriol. 2012 Dec;194(24):6720-7. doi: 10.1128/JB.01167-12. Epub 2012 Sep 28.

41.

Gene cluster encoding cholate catabolism in Rhodococcus spp.

Mohn WW, Wilbrink MH, Casabon I, Stewart GR, Liu J, van der Geize R, Eltis LD.

J Bacteriol. 2012 Dec;194(24):6712-9. doi: 10.1128/JB.01169-12. Epub 2012 Sep 28.

42.

Genomic and transcriptomic studies of an RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine)-degrading actinobacterium.

Chen HP, Zhu SH, Casabon I, Hallam SJ, Crocker FH, Mohn WW, Indest KJ, Eltis LD.

Appl Environ Microbiol. 2012 Nov;78(21):7798-800. doi: 10.1128/AEM.02120-12. Epub 2012 Aug 24.

43.

Significant and persistent impact of timber harvesting on soil microbial communities in Northern coniferous forests.

Hartmann M, Howes CG, VanInsberghe D, Yu H, Bachar D, Christen R, Henrik Nilsson R, Hallam SJ, Mohn WW.

ISME J. 2012 Dec;6(12):2199-218. doi: 10.1038/ismej.2012.84. Epub 2012 Aug 2. Erratum in: ISME J. 2012 Dec;6(12):2320.

44.

Proteomic analysis of survival of Rhodococcus jostii RHA1 during carbon starvation.

Patrauchan MA, Miyazawa D, LeBlanc JC, Aiga C, Florizone C, Dosanjh M, Davies J, Eltis LD, Mohn WW.

Appl Environ Microbiol. 2012 Sep;78(18):6714-25. doi: 10.1128/AEM.01293-12. Epub 2012 Jul 13.

45.

The lung tissue microbiome in chronic obstructive pulmonary disease.

Sze MA, Dimitriu PA, Hayashi S, Elliott WM, McDonough JE, Gosselink JV, Cooper J, Sin DD, Mohn WW, Hogg JC.

Am J Respir Crit Care Med. 2012 May 15;185(10):1073-80. doi: 10.1164/rccm.201111-2075OC. Epub 2012 Mar 15.

46.

Early life antibiotic-driven changes in microbiota enhance susceptibility to allergic asthma.

Russell SL, Gold MJ, Hartmann M, Willing BP, Thorson L, Wlodarska M, Gill N, Blanchet MR, Mohn WW, McNagny KM, Finlay BB.

EMBO Rep. 2012 May 1;13(5):440-7. doi: 10.1038/embor.2012.32.

47.

Long-term warming alters the composition of Arctic soil microbial communities.

Deslippe JR, Hartmann M, Simard SW, Mohn WW.

FEMS Microbiol Ecol. 2012 Nov;82(2):303-15. doi: 10.1111/j.1574-6941.2012.01350.x. Epub 2012 Apr 2.

48.

V-REVCOMP: automated high-throughput detection of reverse complementary 16S rRNA gene sequences in large environmental and taxonomic datasets.

Hartmann M, Howes CG, Veldre V, Schneider S, Vaishampayan PA, Yannarell AC, Quince C, Johansson P, Björkroth KJ, Abarenkov K, Hallam SJ, Mohn WW, Nilsson RH.

FEMS Microbiol Lett. 2011 Jun;319(2):140-5. doi: 10.1111/j.1574-6968.2011.02274.x. Epub 2011 Apr 27.

49.
50.

Biphenyl and ethylbenzene dioxygenases of Rhodococcus jostii RHA1 transform PBDEs.

Robrock KR, Mohn WW, Eltis LD, Alvarez-Cohen L.

Biotechnol Bioeng. 2011 Feb;108(2):313-21. doi: 10.1002/bit.22952.

PMID:
20872819

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