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Preparation and Evaluation of Eudragit® L100 Nanoparticles Loaded Impregnated with KT Tromethamine Loaded PVA -HEC Insertions for Ophthalmic Drug Delivery.

Mohammadi G, Mirzaeei S, Taghe S, Mohammadi P.

Adv Pharm Bull. 2019 Oct;9(4):593-600. doi: 10.15171/apb.2019.068. Epub 2019 Oct 24.


Controllable coacervation of recombinantly produced spider silk protein using kosmotropic salts.

Mohammadi P, Jonkergouw C, Beaune G, Engelhardt P, Kamada A, Timonen JVI, Knowles TPJ, Penttila M, Linder MB.

J Colloid Interface Sci. 2020 Feb 15;560:149-160. doi: 10.1016/j.jcis.2019.10.058. Epub 2019 Oct 16.


Long-Term Follow-up of Autologous Fibroblast Transplantation for Facial Contour Deformities, A Non-Randomized Phase IIa Clinical Trial.

Bajouri A, Orouji Z, Taghiabadi E, Nazari A, Shahbazi A, Fallah N, Mohammadi P, Rezvani M, Jouyandeh Z, Vaezirad F, Khalajasadi Z, Ghasemi M, Fanni A, Haji Hosseinali S, Alizadeh A, Baharvand H, Shafieyan S, Aghdami N.

Cell J. 2020 Apr;22(1):75-84. doi: 10.22074/cellj.2020.6340. Epub 2019 Sep 8.


Genetic regulatory variation in populations informs transcriptome analysis in rare disease.

Mohammadi P, Castel SE, Cummings BB, Einson J, Sousa C, Hoffman P, Donkervoort S, Jiang Z, Mohassel P, Foley AR, Wheeler HE, Im HK, Bonnemann CG, MacArthur DG, Lappalainen T.

Science. 2019 Oct 18;366(6463):351-356. doi: 10.1126/science.aay0256. Epub 2019 Oct 10.


Modulating the Mechanical Performance of Macroscale Fibers through Shear-Induced Alignment and Assembly of Protein Nanofibrils.

Kamada A, Levin A, Toprakcioglu Z, Shen Y, Lutz-Bueno V, Baumann KN, Mohammadi P, Linder MB, Mezzenga R, Knowles TPJ.

Small. 2019 Oct 9:e1904190. doi: 10.1002/smll.201904190. [Epub ahead of print]


Comparative analysis of Chlorosarcinopsis eremi mitochondrial genome with some Chlamydomonadales algae.

Khani-Juyabad F, Mohammadi P, Zarrabi M.

Physiol Mol Biol Plants. 2019 Sep;25(5):1301-1310. doi: 10.1007/s12298-019-00696-y. Epub 2019 Aug 12.


Biomimetic composites with enhanced toughening using silk-inspired triblock proteins and aligned nanocellulose reinforcements.

Mohammadi P, Aranko AS, Landowski CP, Ikkala O, Jaudzems K, Wagermaier W, Linder MB.

Sci Adv. 2019 Sep 13;5(9):eaaw2541. doi: 10.1126/sciadv.aaw2541. eCollection 2019 Sep.


Green synthesis of silver nanoparticles based on oil-water interface method with essential oil of orange peel and its application as nanocatalyst for A3 coupling.

Veisi H, Dadres N, Mohammadi P, Hemmati S.

Mater Sci Eng C Mater Biol Appl. 2019 Dec;105:110031. doi: 10.1016/j.msec.2019.110031. Epub 2019 Jul 30.


In situ biogenic synthesis of Pd nanoparticles over reduced graphene oxide by using a plant extract (Thymbra spicata) and its catalytic evaluation towards cyanation of aryl halides.

Veisi H, Tamoradi T, Karmakar B, Mohammadi P, Hemmati S.

Mater Sci Eng C Mater Biol Appl. 2019 Nov;104:109919. doi: 10.1016/j.msec.2019.109919. Epub 2019 Jun 26.


Time trend analysis of breast cancer in Iran and its six topographical regions: a population-based study.

Bab S, Abdifard E, Elyasianfar S, Mohammadi P, Heidari M.

J Med Life. 2019 Apr-Jun;12(2):140-149. doi: 10.25122/jml-2018-0087.


Nanoformulations of natural products for management of metabolic syndrome.

Taghipour YD, Hajialyani M, Naseri R, Hesari M, Mohammadi P, Stefanucci A, Mollica A, Farzaei MH, Abdollahi M.

Int J Nanomedicine. 2019 Jul 16;14:5303-5321. doi: 10.2147/IJN.S213831. eCollection 2019. Review.


Copper nanoparticles promote rapid wound healing in acute full thickness defect via acceleration of skin cell migration, proliferation, and neovascularization.

Alizadeh S, Seyedalipour B, Shafieyan S, Kheime A, Mohammadi P, Aghdami N.

Biochem Biophys Res Commun. 2019 Oct 1;517(4):684-690. doi: 10.1016/j.bbrc.2019.07.110. Epub 2019 Aug 7.


Formulation and Physicochemical Characterization of Cyclosporine Microfiber by Electrospinning.

Mirzaeei S, Mohammadi G, Fattahi N, Mohammadi P, Fattahi A, Nikbakht MR, Adibkia K.

Adv Pharm Bull. 2019 Jun;9(2):249-254. doi: 10.15171/apb.2019.028. Epub 2019 Jun 1.


Genotyping of avian infectious bronchitis virus in Iran: Detection of D274 and changing in the genotypes rate.

Ghalyanchilangeroudi A, Hosseini H, Fallah Mehrabadi MH, Ghafouri SA, Modiri Hamdan A, Ziafati Z, Esmaeelzadeh Dizaji R, Mohammadi P.

Comp Immunol Microbiol Infect Dis. 2019 Aug;65:110-115. doi: 10.1016/j.cimid.2019.05.011. Epub 2019 May 14.


Mechanistic assessment of cadmium toxicity in association with the functions of estrogen receptors in the Langerhans islets.

Mohammadi P, Rahimifard M, Baeeri M, Abdollahi M, Mostafalou S.

Iran J Basic Med Sci. 2019 Apr;22(4):445-451. doi: 10.22038/ijbms.2019.33939.8076.


Pharmacological Notch pathway inhibition leads to cell cycle arrest and stimulates ascl1 and neurogenin2 genes expression in dental pulp stem cells-derived neurospheres.

Niapour A, Ghasemi Hamidabadi H, Niapour N, Mohammadi P, Sharifi Pasandi M, Malekzadeh V.

Biotechnol Lett. 2019 Jul;41(6-7):873-887. doi: 10.1007/s10529-019-02687-1. Epub 2019 May 9.


Quality preservation of orange concentrate by using hybrid ohmic - Vacuum heating.

Darvishi H, Mohammadi P, Fadavi A, Koushesh Saba M, Behroozi-Khazaei N.

Food Chem. 2019 Aug 15;289:292-298. doi: 10.1016/j.foodchem.2019.03.043. Epub 2019 Mar 12.


Biosynthesis of Au nanoparticles supported on Fe3O4@polyaniline as a heterogeneous and reusable magnetic nanocatalyst for reduction of the azo dyes at ambient temperature.

Najafinejad MS, Mohammadi P, Mehdi Afsahi M, Sheibani H.

Mater Sci Eng C Mater Biol Appl. 2019 May;98:19-29. doi: 10.1016/j.msec.2018.12.098. Epub 2018 Dec 28.


Using high frequency and low-intensity ultrasound to enhance activated sludge characteristics.

Mohammadi P, Karami N, Zinatizadeh AA, Falahi F, Aghamohammadi N, Almasi A.

Ultrason Sonochem. 2019 Jun;54:274-280. doi: 10.1016/j.ultsonch.2019.01.030. Epub 2019 Jan 22.


Silver nanoparticles decorated on thiol-modified magnetite nanoparticles (Fe3O4/SiO2-Pr-S-Ag) as a recyclable nanocatalyst for degradation of organic dyes.

Veisi H, Razeghi S, Mohammadi P, Hemmati S.

Mater Sci Eng C Mater Biol Appl. 2019 Apr;97:624-631. doi: 10.1016/j.msec.2018.12.076. Epub 2018 Dec 26.


Proteo-Transcriptomic Dynamics of Cellular Response to HIV-1 Infection.

Golumbeanu M, Desfarges S, Hernandez C, Quadroni M, Rato S, Mohammadi P, Telenti A, Beerenwinkel N, Ciuffi A.

Sci Rep. 2019 Jan 18;9(1):213. doi: 10.1038/s41598-018-36135-3.


Silica-gentamicin nanohybrids: combating antibiotic resistance, bacterial biofilms, and in vivo toxicity.

Mosselhy DA, He W, Hynönen U, Meng Y, Mohammadi P, Palva A, Feng Q, Hannula SP, Nordström K, Linder MB.

Int J Nanomedicine. 2018 Nov 28;13:7939-7957. doi: 10.2147/IJN.S182611. eCollection 2018. Erratum in: Int J Nanomedicine. 2018 Dec 13;13:8577-8578.


A primer on deep learning in genomics.

Zou J, Huss M, Abid A, Mohammadi P, Torkamani A, Telenti A.

Nat Genet. 2019 Jan;51(1):12-18. doi: 10.1038/s41588-018-0295-5. Epub 2018 Nov 26. Review.


Including 793/B type avian infectious bronchitis vaccine in 1-day-old chicken increased the protection against QX genotype.

Karimi V, Mohammadi P, Ghalyanchilangeroudi A, Ghafouri SA, Hashemzadeh M, Farahani RK, Maghsouldoo H, Isakakroudi N.

Trop Anim Health Prod. 2019 Mar;51(3):629-635. doi: 10.1007/s11250-018-1730-4. Epub 2018 Oct 29.


Phase transitions as intermediate steps in the formation of molecularly engineered protein fibers.

Mohammadi P, Aranko AS, Lemetti L, Cenev Z, Zhou Q, Virtanen S, Landowski CP, Penttilä M, Fischer WJ, Wagermaier W, Linder MB.

Commun Biol. 2018 Jul 2;1:86. doi: 10.1038/s42003-018-0090-y. eCollection 2018.


Self-Coacervation of a Silk-Like Protein and Its Use As an Adhesive for Cellulosic Materials.

Mohammadi P, Beaune G, Stokke BT, Timonen JVI, Linder MB.

ACS Macro Lett. 2018 Sep 18;7(9):1120-1125. doi: 10.1021/acsmacrolett.8b00527. Epub 2018 Sep 5.


Antifungal, antibacterial, antibiofilm and colorimetric sensing of toxic metals activities of eco friendly, economical synthesized Ag/AgCl nanoparticles using Malva Sylvestris leaf extracts.

Feizi S, Taghipour E, Ghadam P, Mohammadi P.

Microb Pathog. 2018 Dec;125:33-42. doi: 10.1016/j.micpath.2018.08.054. Epub 2018 Aug 29.


Modified penetrance of coding variants by cis-regulatory variation contributes to disease risk.

Castel SE, Cervera A, Mohammadi P, Aguet F, Reverter F, Wolman A, Guigo R, Iossifov I, Vasileva A, Lappalainen T.

Nat Genet. 2018 Sep;50(9):1327-1334. doi: 10.1038/s41588-018-0192-y. Epub 2018 Aug 20.


Amniotic Membrane Extract Eye Drop Promotes Limbal Stem Cell Proliferation and Corneal Epithelium Healing.

Shayan Asl N, Nejat F, Mohammadi P, Nekoukar A, Hesam S, Ebrahimi M, Jadidi K.

Cell J. 2019 Jan;20(4):459-468. doi: 10.22074/cellj.2019.5423. Epub 2018 Aug 1.


Coacervation of resilin fusion proteins containing terminal functionalities.

Fang W, Nonappa, Vitikainen M, Mohammadi P, Koskela S, Soikkeli M, Westerholm-Parvinen A, Landowski CP, Penttilä M, Linder MB, Laaksonen P.

Colloids Surf B Biointerfaces. 2018 Nov 1;171:590-596. doi: 10.1016/j.colsurfb.2018.07.048. Epub 2018 Jul 24.


One-carbon cycle support rescues sperm damage in experimentally induced varicocoele in rats.

Mohammadi P, Hassani-Bafrani H, Tavalaee M, Dattilo M, Nasr-Esfahani MH.

BJU Int. 2018 Sep;122(3):480-489. doi: 10.1111/bju.14385. Epub 2018 Jun 3.


High rate treatment of hospital wastewater using activated sludge process induced by high-frequency ultrasound.

Karami N, Mohammadi P, Zinatizadeh A, Falahi F, Aghamohammadi N.

Ultrason Sonochem. 2018 Sep;46:89-98. doi: 10.1016/j.ultsonch.2018.04.009. Epub 2018 Apr 19.


A single-arm open-label clinical trial of autologous epidermal cell transplantation for stable vitiligo: A 30-month follow-up.

Orouji Z, Bajouri A, Ghasemi M, Mohammadi P, Fallah N, Shahbazi A, Rezvani M, Vaezirad F, Khalajasadi Z, Alizadeh A, Taghiabadi E, Dashtbozorgi S, Aghdami R, Hosseini SE, Bahahrvand H, Shafieyan S, Aghdami N.

J Dermatol Sci. 2018 Jan;89(1):52-59. doi: 10.1016/j.jdermsci.2017.10.007. Epub 2017 Oct 18.


Quantifying the regulatory effect size of cis-acting genetic variation using allelic fold change.

Mohammadi P, Castel SE, Brown AA, Lappalainen T.

Genome Res. 2017 Nov;27(11):1872-1884. doi: 10.1101/gr.216747.116. Epub 2017 Oct 11.


Aligning cellulose nanofibril dispersions for tougher fibers.

Mohammadi P, Toivonen MS, Ikkala O, Wagermaier W, Linder MB.

Sci Rep. 2017 Sep 19;7(1):11860. doi: 10.1038/s41598-017-12107-x.


Genetic regulatory effects modified by immune activation contribute to autoimmune disease associations.

Kim-Hellmuth S, Bechheim M, Pütz B, Mohammadi P, Nédélec Y, Giangreco N, Becker J, Kaiser V, Fricker N, Beier E, Boor P, Castel SE, Nöthen MM, Barreiro LB, Pickrell JK, Müller-Myhsok B, Lappalainen T, Schumacher J, Hornung V.

Nat Commun. 2017 Aug 16;8(1):266. doi: 10.1038/s41467-017-00366-1.


Comparison of aglycon and glycosidic saponin extracts of Cyclamen coum tuber against Candida spp.

Sajjadi ST, Saboora A, Mohammadi P.

Curr Med Mycol. 2016 Jun;2(2):40-44. doi: 10.18869/acadpub.cmm.2.2.7.


Hair Follicle Generation by Injections of Adult Human Follicular Epithelial and Dermal Papilla Cells into Nude Mice.

Nilforoushzadeh M, Rahimi Jameh E, Jaffary F, Abolhasani E, Keshtmand G, Zarkob H, Mohammadi P, Aghdami N.

Cell J. 2017 Jul-Sep;19(2):259-268. doi: 10.22074/cellj.2016.3916. Epub 2017 Feb 22.


Complexes of Magnetic Nanoparticles with Cellulose Nanocrystals as Regenerable, Highly Efficient, and Selective Platform for Protein Separation.

Guo J, Filpponen I, Johansson LS, Mohammadi P, Latikka M, Linder MB, Ras RH, Rojas OJ.

Biomacromolecules. 2017 Mar 13;18(3):898-905. doi: 10.1021/acs.biomac.6b01778. Epub 2017 Feb 27.


Automated Design of Synthetic Cell Classifier Circuits Using a Two-Step Optimization Strategy.

Mohammadi P, Beerenwinkel N, Benenson Y.

Cell Syst. 2017 Feb 22;4(2):207-218.e14. doi: 10.1016/j.cels.2017.01.003. Epub 2017 Feb 8.


IFI16 is required for DNA sensing in human macrophages by promoting production and function of cGAMP.

Jønsson KL, Laustsen A, Krapp C, Skipper KA, Thavachelvam K, Hotter D, Egedal JH, Kjolby M, Mohammadi P, Prabakaran T, Sørensen LK, Sun C, Jensen SB, Holm CK, Lebbink RJ, Johannsen M, Nyegaard M, Mikkelsen JG, Kirchhoff F, Paludan SR, Jakobsen MR.

Nat Commun. 2017 Feb 10;8:14391. doi: 10.1038/ncomms14391.


Corrigendum: Differential expression of lncRNAs during the HIV replication cycle: an underestimated layer in the HIV-host interplay.

Trypsteen W, Mohammadi P, Van Hecke C, Mestdagh P, Lefever S, Saeys Y, De Bleser P, Vandesompele J, Ciuffi A, Vandekerckhove L, De Spiegelaere W.

Sci Rep. 2017 Jan 24;7:41112. doi: 10.1038/srep41112. No abstract available.


Construction and characterization of monoclonal antibodies against the extracellular domain of B-lymphocyte antigen CD20 using DNA immunization method.

Khademi F, Mostafaie A, Parvaneh S, Gholami Rad F, Mohammadi P, Bahrami G.

Int Immunopharmacol. 2017 Feb;43:23-32. doi: 10.1016/j.intimp.2016.11.035. Epub 2016 Dec 7.


Preparation, Physicochemical Characterization and Anti-fungal Evaluation of Nystatin-Loaded PLGA-Glucosamine Nanoparticles.

Mohammadi G, Shakeri A, Fattahi A, Mohammadi P, Mikaeili A, Aliabadi A, Adibkia K.

Pharm Res. 2017 Feb;34(2):301-309. doi: 10.1007/s11095-016-2062-6. Epub 2016 Dec 7.


Screening Characteristics of Ultrasonography in Detection of Ankle Fractures.

Shojaee M, Hakimzadeh F, Mohammadi P, Sabzghabaei A, Manouchehrifar M, Arhami Dolatabadi A.

Emerg (Tehran). 2016 Nov;4(4):188-191.


Differential expression of lncRNAs during the HIV replication cycle: an underestimated layer in the HIV-host interplay.

Trypsteen W, Mohammadi P, Van Hecke C, Mestdagh P, Lefever S, Saeys Y, De Bleser P, Vandesompele J, Ciuffi A, Vandekerckhove L, De Spiegelaere W.

Sci Rep. 2016 Oct 26;6:36111. doi: 10.1038/srep36111. Erratum in: Sci Rep. 2017 Jan 24;7:41112.


Human Hair Reconstruction: Close, But Yet So Far.

Mohammadi P, Youssef KK, Abbasalizadeh S, Baharvand H, Aghdami N.

Stem Cells Dev. 2016 Dec 1;25(23):1767-1779. Epub 2016 Nov 8. Review.


Rare variant phasing and haplotypic expression from RNA sequencing with phASER.

Castel SE, Mohammadi P, Chung WK, Shen Y, Lappalainen T.

Nat Commun. 2016 Sep 8;7:12817. doi: 10.1038/ncomms12817.

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