Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 1 to 50 of 77

1.

HepaRG-Progenitor Cell Derived Hepatocytes Cultured in Bioartificial Livers Are Protected from Healthy- and Acute Liver Failure-Plasma Induced Toxicity.

van Wenum M, Treskes P, Adam AAA, van der Mark VA, Jongejan A, Moerland PD, van Gulik TM, Oude Elferink RPJ, Chamuleau RAFM, Hoekstra R.

Cell Physiol Biochem. 2018;48(5):2189-2204. doi: 10.1159/000492560. Epub 2018 Aug 15.

2.

Study Design and qPCR Data Analysis Guidelines for Reliable Circulating miRNA Biomarker Experiments: A Review.

de Ronde MWJ, Ruijter JM, Moerland PD, Creemers EE, Pinto-Sietsma SJ.

Clin Chem. 2018 Sep;64(9):1308-1318. doi: 10.1373/clinchem.2017.285288. Epub 2018 Jun 14. Review.

PMID:
29903876
3.

Targeting CD40-Induced TRAF6 Signaling in Macrophages Reduces Atherosclerosis.

Seijkens TTP, van Tiel CM, Kusters PJH, Atzler D, Soehnlein O, Zarzycka B, Aarts SABM, Lameijer M, Gijbels MJ, Beckers L, den Toom M, Slütter B, Kuiper J, Duchene J, Aslani M, Megens RTA, van 't Veer C, Kooij G, Schrijver R, Hoeksema MA, Boon L, Fay F, Tang J, Baxter S, Jongejan A, Moerland PD, Vriend G, Bleijlevens B, Fisher EA, Duivenvoorden R, Gerdes N, de Winther MPJ, Nicolaes GA, Mulder WJM, Weber C, Lutgens E.

J Am Coll Cardiol. 2018 Feb 6;71(5):527-542. doi: 10.1016/j.jacc.2017.11.055.

4.

Oxygen drives hepatocyte differentiation and phenotype stability in liver cell lines.

van Wenum M, Adam AAA, van der Mark VA, Chang JC, Wildenberg ME, Hendriks EJ, Jongejan A, Moerland PD, van Gulik TM, Oude Elferink RP, Chamuleau RAFM, Hoekstra R.

J Cell Commun Signal. 2018 Sep;12(3):575-588. doi: 10.1007/s12079-018-0456-4. Epub 2018 Feb 4.

5.

Small sample sizes in high-throughput miRNA screens: A common pitfall for the identification of miRNA biomarkers.

Kok MGM, de Ronde MWJ, Moerland PD, Ruijter JM, Creemers EE, Pinto-Sietsma SJ.

Biomol Detect Quantif. 2017 Dec 18;15:1-5. doi: 10.1016/j.bdq.2017.11.002. eCollection 2018 May.

6.

Trigger-happy resident memory CD4+ T cells inhabit the human lungs.

Oja AE, Piet B, Helbig C, Stark R, van der Zwan D, Blaauwgeers H, Remmerswaal EBM, Amsen D, Jonkers RE, Moerland PD, Nolte MA, van Lier RAW, Hombrink P.

Mucosal Immunol. 2018 May;11(3):654-667. doi: 10.1038/mi.2017.94. Epub 2017 Nov 15.

PMID:
29139478
7.

Inhibition of miR-142-5P ameliorates disease in mouse models of experimental colitis.

Duijvis NW, Moerland PD, Kunne C, Slaman MMW, van Dooren FH, Vogels EW, de Jonge WJ, Meijer SL, Fluiter K, Te Velde AA.

PLoS One. 2017 Oct 23;12(10):e0185097. doi: 10.1371/journal.pone.0185097. eCollection 2017.

8.

AMC-Bio-Artificial Liver culturing enhances mitochondrial biogenesis in human liver cell lines: The role of oxygen, medium perfusion and 3D configuration.

Adam AAA, van Wenum M, van der Mark VA, Jongejan A, Moerland PD, Houtkooper RH, Wanders RJA, Oude Elferink RP, Chamuleau RAFM, Hoekstra R.

Mitochondrion. 2018 Mar;39:30-42. doi: 10.1016/j.mito.2017.08.011. Epub 2017 Aug 24.

PMID:
28844938
9.

Comparative gene expression study and pathway analysis of the human iris- and the retinal pigment epithelium.

Bennis A, Ten Brink JB, Moerland PD, Heine VM, Bergen AA.

PLoS One. 2017 Aug 21;12(8):e0182983. doi: 10.1371/journal.pone.0182983. eCollection 2017.

10.

Stem Cell Derived Retinal Pigment Epithelium: The Role of Pigmentation as Maturation Marker and Gene Expression Profile Comparison with Human Endogenous Retinal Pigment Epithelium.

Bennis A, Jacobs JG, Catsburg LAE, Ten Brink JB, Koster C, Schlingemann RO, van Meurs J, Gorgels TGMF, Moerland PD, Heine VM, Bergen AA.

Stem Cell Rev. 2017 Oct;13(5):659-669. doi: 10.1007/s12015-017-9754-0.

11.

The dynamics of early-state transcriptional changes and aggregate formation in a Huntington's disease cell model.

van Hagen M, Piebes DGE, de Leeuw WC, Vuist IM, van Roon-Mom WMC, Moerland PD, Verschure PJ.

BMC Genomics. 2017 May 12;18(1):373. doi: 10.1186/s12864-017-3745-z.

12.

Monocytic microRNA profile associated with coronary collateral artery function in chronic total occlusion patients.

Hakimzadeh N, Elias J, Wijntjens GWM, Theunissen R, van Weert A, Smulders MW, van den Akker N, Moerland PD, Verberne HJ, Hoebers LP, Henriques JPS, van der Laan AM, Ilhan M, Post M, Bekkers SCAM, Piek JJ.

Sci Rep. 2017 May 8;7(1):1532. doi: 10.1038/s41598-017-01695-3.

13.

High miR-124-3p expression identifies smoking individuals susceptible to atherosclerosis.

de Ronde MWJ, Kok MGM, Moerland PD, Van den Bossche J, Neele AE, Halliani A, van der Made I, de Winther MPJ, Meijers JCM, Creemers EE, Pinto-Sietsma SJ.

Atherosclerosis. 2017 Aug;263:377-384. doi: 10.1016/j.atherosclerosis.2017.03.045. Epub 2017 Apr 5.

14.

Macrophages confer survival signals via CCR1-dependent translational MCL-1 induction in chronic lymphocytic leukemia.

van Attekum MHA, Terpstra S, Slinger E, von Lindern M, Moerland PD, Jongejan A, Kater AP, Eldering E.

Oncogene. 2017 Jun 29;36(26):3651-3660. doi: 10.1038/onc.2016.515. Epub 2017 Feb 13.

15.

Prostate Cancer Patients with Late Radiation Toxicity Exhibit Reduced Expression of Genes Involved in DNA Double-Strand Break Repair and Homologous Recombination.

van Oorschot B, Uitterhoeve L, Oomen I, Ten Cate R, Medema JP, Vrieling H, Stalpers LJ, Moerland PD, Franken NA.

Cancer Res. 2017 Mar 15;77(6):1485-1491. doi: 10.1158/0008-5472.CAN-16-1966. Epub 2017 Jan 20.

16.

Erratum: Programs for the persistence, vigilance and control of human CD8+ lung-resident memory T cells.

Hombrink P, Helbig C, Backer RA, Piet B, Oja AE, Stark R, Brasser G, Jongejan A, Jonkers RE, Nota B, Basak O, Clevers HC, Moerland PD, Amsen D, van Lier RA.

Nat Immunol. 2017 Jan 19;18(2):246. doi: 10.1038/ni0217-246d. No abstract available.

PMID:
28102212
17.

Multi-OMIC profiling of survival and metabolic signaling networks in cells subjected to photodynamic therapy.

Weijer R, Clavier S, Zaal EA, Pijls MM, van Kooten RT, Vermaas K, Leen R, Jongejan A, Moerland PD, van Kampen AH, van Kuilenburg AB, Berkers CR, Lemeer S, Heger M.

Cell Mol Life Sci. 2017 Mar;74(6):1133-1151. doi: 10.1007/s00018-016-2401-0. Epub 2016 Nov 1.

18.

Programs for the persistence, vigilance and control of human CD8+ lung-resident memory T cells.

Hombrink P, Helbig C, Backer RA, Piet B, Oja AE, Stark R, Brasser G, Jongejan A, Jonkers RE, Nota B, Basak O, Clevers HC, Moerland PD, Amsen D, van Lier RA.

Nat Immunol. 2016 Dec;17(12):1467-1478. doi: 10.1038/ni.3589. Epub 2016 Oct 24. Erratum in: Nat Immunol. 2017 Jan 19;18(2):246.

PMID:
27776108
19.

Erratum to: Breast cancer subtype predictors revisited: from consensus to concordance?

Sontrop HM, Reinders MJ, Moerland PD.

BMC Med Genomics. 2016 Jul 14;9(1):39. No abstract available.

20.

compendiumdb: an R package for retrieval and storage of functional genomics data.

Nandal UK, van Kampen AH, Moerland PD.

Bioinformatics. 2016 Sep 15;32(18):2856-7. doi: 10.1093/bioinformatics/btw335. Epub 2016 Jun 9.

PMID:
27323392
21.

Breast cancer subtype predictors revisited: from consensus to concordance?

Sontrop HMJ, Reinders MJT, Moerland PD.

BMC Med Genomics. 2016 Jun 3;9(1):26. doi: 10.1186/s12920-016-0185-6. Erratum in: BMC Med Genomics. 2016 Jul 14;9(1):39.

22.

Nur77-deficiency in bone marrow-derived macrophages modulates inflammatory responses, extracellular matrix homeostasis, phagocytosis and tolerance.

Hamers AA, Argmann C, Moerland PD, Koenis DS, Marinković G, Sokolović M, de Vos AF, de Vries CJ, van Tiel CM.

BMC Genomics. 2016 Mar 1;17:162. doi: 10.1186/s12864-016-2469-9.

23.

Low-power photodynamic therapy induces survival signaling in perihilar cholangiocarcinoma cells.

Weijer R, Broekgaarden M, van Golen RF, Bulle E, Nieuwenhuis E, Jongejan A, Moerland PD, van Kampen AH, van Gulik TM, Heger M.

BMC Cancer. 2015 Dec 26;15:1014. doi: 10.1186/s12885-015-1994-2.

24.

Taking Bioinformatics to Systems Medicine.

van Kampen AH, Moerland PD.

Methods Mol Biol. 2016;1386:17-41. doi: 10.1007/978-1-4939-3283-2_2. Review.

PMID:
26677177
25.

Low miR-19b-1-5p expression in isolated platelets after aspirin use is related to aspirin insensitivity.

Kok MG, Mandolini C, Moerland PD, de Ronde MW, Sondermeijer BM, Halliani A, Nieuwland R, Cipollone F, Creemers EE, Meijers JC, Pinto-Sietsma SJ.

Int J Cardiol. 2016 Jan 15;203:262-3. doi: 10.1016/j.ijcard.2015.10.098. Epub 2015 Oct 23. No abstract available.

PMID:
26519680
26.

Gene Expression and MicroRNA Expression Analysis in Small Arteries of Spontaneously Hypertensive Rats. Evidence for ER Stress.

Palao T, Swärd K, Jongejan A, Moerland PD, de Vos J, van Weert A, Arribas SM, Groma G, vanBavel E, Bakker EN.

PLoS One. 2015 Sep 10;10(9):e0137027. doi: 10.1371/journal.pone.0137027. eCollection 2015.

27.

Assessment of p53 and ATM functionality in chronic lymphocytic leukemia by multiplex ligation-dependent probe amplification.

te Raa GD, Moerland PD, Leeksma AC, Derks IA, Yigittop H, Laddach N, Loden-van Straaten M, Navrkalova V, Trbusek M, Luijks DM, Zenz T, Skowronska A, Hoogendoorn M, Stankovic T, van Oers MH, Eldering E, Kater AP.

Cell Death Dis. 2015 Aug 6;6:e1852. doi: 10.1038/cddis.2015.223.

28.

Blimp-1 homolog Hobit identifies effector-type lymphocytes in humans.

Vieira Braga FA, Hertoghs KM, Kragten NA, Doody GM, Barnes NA, Remmerswaal EB, Hsiao CC, Moerland PD, Wouters D, Derks IA, van Stijn A, Demkes M, Hamann J, Eldering E, Nolte MA, Tooze RM, ten Berge IJ, van Gisbergen KP, van Lier RA.

Eur J Immunol. 2015 Oct;45(10):2945-58. doi: 10.1002/eji.201545650. Epub 2015 Sep 7.

29.

Meta-Analysis of Placental Transcriptome Data Identifies a Novel Molecular Pathway Related to Preeclampsia.

van Uitert M, Moerland PD, Enquobahrie DA, Laivuori H, van der Post JA, Ris-Stalpers C, Afink GB.

PLoS One. 2015 Jul 14;10(7):e0132468. doi: 10.1371/journal.pone.0132468. eCollection 2015.

30.

Normalization panels for the reliable quantification of circulating microRNAs by RT-qPCR.

Kok MG, Halliani A, Moerland PD, Meijers JC, Creemers EE, Pinto-Sietsma SJ.

FASEB J. 2015 Sep;29(9):3853-62. doi: 10.1096/fj.15-271312. Epub 2015 May 28.

PMID:
26023181
31.

The Selective Sirtuin 1 Activator SRT2104 Reduces Endotoxin-Induced Cytokine Release and Coagulation Activation in Humans.

van der Meer AJ, Scicluna BP, Moerland PD, Lin J, Jacobson EW, Vlasuk GP, van der Poll T.

Crit Care Med. 2015 Jun;43(6):e199-202. doi: 10.1097/CCM.0000000000000949.

PMID:
25978169
32.

Multi-omic data analysis using Galaxy.

Boekel J, Chilton JM, Cooke IR, Horvatovich PL, Jagtap PD, Käll L, Lehtiö J, Lukasse P, Moerland PD, Griffin TJ.

Nat Biotechnol. 2015 Feb;33(2):137-9. doi: 10.1038/nbt.3134. No abstract available.

PMID:
25658277
33.

Candidate prioritization for low-abundant differentially expressed proteins in 2D-DIGE datasets.

Nandal UK, Vlietstra WJ, Byrman C, Jeeninga RE, Ringrose JH, van Kampen AH, Speijer D, Moerland PD.

BMC Bioinformatics. 2015 Jan 28;16:25. doi: 10.1186/s12859-015-0455-x.

34.

Increased glucocerebrosidase expression and activity in preeclamptic placenta.

Jebbink JM, Boot RG, Keijser R, Moerland PD, Aten J, Veenboer GJ, van Wely M, Buimer M, Ver Loren van Themaat E, Aerts JM, van der Post JA, Afink GB, Ris-Stalpers C.

Placenta. 2015 Feb;36(2):160-9. doi: 10.1016/j.placenta.2014.12.001. Epub 2014 Dec 13.

PMID:
25552189
35.

The impact of SF3B1 mutations in CLL on the DNA-damage response.

Te Raa GD, Derks IA, Navrkalova V, Skowronska A, Moerland PD, van Laar J, Oldreive C, Monsuur H, Trbusek M, Malcikova J, Lodén M, Geisler CH, Hüllein J, Jethwa A, Zenz T, Pospisilova S, Stankovic T, van Oers MH, Kater AP, Eldering E.

Leukemia. 2015 May;29(5):1133-42. doi: 10.1038/leu.2014.318. Epub 2014 Nov 5.

PMID:
25371178
36.

LIM-only protein FHL2 is a positive regulator of liver X receptors in smooth muscle cells involved in lipid homeostasis.

Kurakula K, Sommer D, Sokolovic M, Moerland PD, Scheij S, van Loenen PB, Koenis DS, Zelcer N, van Tiel CM, de Vries CJ.

Mol Cell Biol. 2015 Jan;35(1):52-62. doi: 10.1128/MCB.00525-14. Epub 2014 Oct 20.

37.

Label-free LC-MSe in tissue and serum reveals protein networks underlying differences between benign and malignant serous ovarian tumors.

Wegdam W, Argmann CA, Kramer G, Vissers JP, Buist MR, Kenter GG, Aerts JM, Meijer D, Moerland PD.

PLoS One. 2014 Sep 29;9(9):e108046. doi: 10.1371/journal.pone.0108046. eCollection 2014.

38.

Integrative genomic approach identifies multiple genes involved in cardiac collagen deposition.

Lodder EM, Scicluna BP, Beekman L, Arends D, Moerland PD, Tanck MW, Adriaens ME, Bezzina CR.

Circ Cardiovasc Genet. 2014 Dec;7(6):790-8. doi: 10.1161/CIRCGENETICS.114.000537. Epub 2014 Sep 12.

PMID:
25217174
39.

Genome-wide identification of expression quantitative trait loci (eQTLs) in human heart.

Koopmann TT, Adriaens ME, Moerland PD, Marsman RF, Westerveld ML, Lal S, Zhang T, Simmons CQ, Baczko I, dos Remedios C, Bishopric NH, Varro A, George AL Jr, Lodder EM, Bezzina CR.

PLoS One. 2014 May 20;9(5):e97380. doi: 10.1371/journal.pone.0097380. eCollection 2014.

40.

Effect of interleukin-17 on gene expression profile of fibroblasts from Crohn's disease patients.

Kerami Z, Duijvis NW, Vogels EW, van Dooren FH, Moerland PD, Te Velde AA.

J Crohns Colitis. 2014 Oct;8(10):1208-16. doi: 10.1016/j.crohns.2014.02.009. Epub 2014 Mar 15.

PMID:
24637010
41.

Reduced activity of double-strand break repair genes in prostate cancer patients with late normal tissue radiation toxicity.

van Oorschot B, Hovingh SE, Moerland PD, Medema JP, Stalpers LJ, Vrieling H, Franken NA.

Int J Radiat Oncol Biol Phys. 2014 Mar 1;88(3):664-70. doi: 10.1016/j.ijrobp.2013.11.219. Epub 2014 Jan 8.

PMID:
24411188
42.

NetWeAvers: an R package for integrative biological network analysis with mass spectrometry data.

McClellan EA, Moerland PD, van der Spek PJ, Stubbs AP.

Bioinformatics. 2013 Nov 15;29(22):2946-7. doi: 10.1093/bioinformatics/btt513. Epub 2013 Sep 4.

43.

Differentially expressed genes in the pre-eclamptic placenta: a systematic review and meta-analysis.

Kleinrouweler CE, van Uitert M, Moerland PD, Ris-Stalpers C, van der Post JA, Afink GB.

PLoS One. 2013 Jul 12;8(7):e68991. doi: 10.1371/journal.pone.0068991. Print 2013. Review.

44.

Consensus and conflict cards for metabolic pathway databases.

Stobbe MD, Swertz MA, Thiele I, Rengaw T, van Kampen AH, Moerland PD.

BMC Syst Biol. 2013 Jun 26;7:50. doi: 10.1186/1752-0509-7-50.

45.

Mechanisms of age-dependent response to winter temperature in perennial flowering of Arabis alpina.

Bergonzi S, Albani MC, Ver Loren van Themaat E, Nordström KJ, Wang R, Schneeberger K, Moerland PD, Coupland G.

Science. 2013 May 31;340(6136):1094-7. doi: 10.1126/science.1234116.

46.

Dissection of a quantitative trait locus for PR interval duration identifies Tnni3k as a novel modulator of cardiac conduction.

Lodder EM, Scicluna BP, Milano A, Sun AY, Tang H, Remme CA, Moerland PD, Tanck MW, Pitt GS, Marchuk DA, Bezzina CR.

PLoS Genet. 2012;8(12):e1003113. doi: 10.1371/journal.pgen.1003113. Epub 2012 Dec 6.

47.

Knowledge representation in metabolic pathway databases.

Stobbe MD, Jansen GA, Moerland PD, van Kampen AH.

Brief Bioinform. 2014 May;15(3):455-70. doi: 10.1093/bib/bbs060. Epub 2012 Nov 30. Review.

PMID:
23202525
48.

A critical assessment of SELDI-TOF-MS for biomarker discovery in serum and tissue of patients with an ovarian mass.

Wegdam W, Moerland PD, Meijer D, de Jong SM, Hoefsloot HC, Kenter GG, Buist MR, Aerts JM.

Proteome Sci. 2012 Jul 23;10(1):45. doi: 10.1186/1477-5956-10-45.

49.

Proteomic analysis of HIV-T cell interaction: an update.

Kramer G, Moerland PD, Jeeninga RE, Vlietstra WJ, Ringrose JH, Byrman C, Berkhout B, Speijer D.

Front Microbiol. 2012 Jul 4;3:240. doi: 10.3389/fmicb.2012.00240. eCollection 2012.

50.

Improving the description of metabolic networks: the TCA cycle as example.

Stobbe MD, Houten SM, van Kampen AH, Wanders RJ, Moerland PD.

FASEB J. 2012 Sep;26(9):3625-36. doi: 10.1096/fj.11-203091. Epub 2012 Jun 1.

PMID:
22661004

Supplemental Content

Loading ...
Support Center