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Fluorescence enhancement via aggregation effect due to microenvironmental alterations in human hemoglobin protein in presence of carbon quantum dots (CQD): Comparative spectroscopic approach.

Chakraborty M, Mitra I, Sarkar K, Bardhan M, Paul S, Basu S, Goswami A, Saha A, Show B, Ganguly T.

Spectrochim Acta A Mol Biomol Spectrosc. 2019 Feb 28;215:313-326. doi: 10.1016/j.saa.2019.02.108. [Epub ahead of print]


A reference haplotype panel for genome-wide imputation of short tandem repeats.

Saini S, Mitra I, Mousavi N, Fotsing SF, Gymrek M.

Nat Commun. 2018 Oct 23;9(1):4397. doi: 10.1038/s41467-018-06694-0.


Influenza-Like Illness in Travelers to the Developing World.

Wood S, Telu K, Tribble D, Ganesan A, Kunz A, Fairchok M, Schnaubelt E, Johnson MD, Maves R, Fraser J, Mitra I, Lalani T, Yun HC, For The Infectious Disease Clinical Research Program TravMil Study Group.

Am J Trop Med Hyg. 2018 Nov;99(5):1269-1274. doi: 10.4269/ajtmh.17-0884.


Comparison of stool collection and storage on Whatman FTA Elute cards versus frozen stool for enteropathogen detection using the TaqMan Array Card PCR assay.

Lalani T, Tisdale MD, Liu J, Mitra I, Philip C, Odundo E, Reyes F, Simons MP, Fraser JA, Hutley E, Connor P, Swierczewski BE, Houpt E, Tribble DR, Riddle MS.

PLoS One. 2018 Aug 30;13(8):e0202178. doi: 10.1371/journal.pone.0202178. eCollection 2018.


Aggressive fibromatosis response to tamoxifen: lack of correlation between MRI and symptomatic response.

Libertini M, Mitra I, van der Graaf WTA, Miah AB, Judson I, Jones RL, Thomas K, Moskovic E, Szucs Z, Benson C, Messiou C.

Clin Sarcoma Res. 2018 May 14;8:13. doi: 10.1186/s13569-018-0100-3. eCollection 2018.


To reveal the nature of interactions of human hemoglobin with gold nanoparticles having two different morphologies (sphere and star-shaped) by using various spectroscopic techniques.

Chakraborty M, Paul S, Mitra I, Bardhan M, Bose M, Saha A, Ganguly T.

J Photochem Photobiol B. 2018 Jan;178:355-366. doi: 10.1016/j.jphotobiol.2017.11.026. Epub 2017 Nov 22.


Correction: Pleiotropic Mechanisms Indicated for Sex Differences in Autism.

Mitra I, Tsang K, Ladd-Acosta C, Croen LA, Aldinger KA, Hendren RL, Traglia M, Lavillaureix A, Zaitlen N, Oldham MC, Levitt P, Nelson S, Amaral DG, Hertz-Picciotto I, Fallin MD, Weiss LA.

PLoS Genet. 2017 Jun 7;13(6):e1006831. doi: 10.1371/journal.pgen.1006831. eCollection 2017 Jun.


Vaccination of active component US military personnel against Salmonella Typhi.

Porter CK, Sorrell T, Mitra I, Riddle MS.

Vaccine. 2017 Mar 27;35(14):1742-1748. doi: 10.1016/j.vaccine.2017.02.050. Epub 2017 Mar 6.


Reverse Pathway Genetic Approach Identifies Epistasis in Autism Spectrum Disorders.

Mitra I, Lavillaureix A, Yeh E, Traglia M, Tsang K, Bearden CE, Rauen KA, Weiss LA.

PLoS Genet. 2017 Jan 11;13(1):e1006516. doi: 10.1371/journal.pgen.1006516. eCollection 2017 Jan.


Pleiotropic Mechanisms Indicated for Sex Differences in Autism.

Mitra I, Tsang K, Ladd-Acosta C, Croen LA, Aldinger KA, Hendren RL, Traglia M, Lavillaureix A, Zaitlen N, Oldham MC, Levitt P, Nelson S, Amaral DG, Hertz-Picciotto I, Fallin MD, Weiss LA.

PLoS Genet. 2016 Nov 15;12(11):e1006425. doi: 10.1371/journal.pgen.1006425. eCollection 2016 Nov. Erratum in: PLoS Genet. 2017 Jun 7;13(6):e1006831.


Primary systemic amyloidosis: imaging interpretation of this complex multisystemic disease.

Mitra I, Tung K.

BJR Case Rep. 2016 Nov 2;2(4):20150171. doi: 10.1259/bjrcr.20150171. eCollection 2016.


Structural Characterization of Serum N-Glycans by Methylamidation, Fluorescent Labeling, and Analysis by Microchip Electrophoresis.

Mitra I, Snyder CM, Zhou X, Campos MI, Alley WR Jr, Novotny MV, Jacobson SC.

Anal Chem. 2016 Sep 20;88(18):8965-71. doi: 10.1021/acs.analchem.6b00882. Epub 2016 Sep 2.


In situ characterization of the mTORC1 during adipogenesis of human adult stem cells on chip.

Wu X, Schneider N, Platen A, Mitra I, Blazek M, Zengerle R, Schüle R, Meier M.

Proc Natl Acad Sci U S A. 2016 Jul 19;113(29):E4143-50. doi: 10.1073/pnas.1601207113. Epub 2016 Jul 5.


A comparison of compliance rates with anti-vectorial protective measures during travel to regions with dengue or chikungunya activity, and regions endemic for Plasmodium falciparum malaria.

Lalani T, Yun H, Tribble D, Ganesan A, Kunz A, Fairchok M, Schnaubelt E, Fraser J, Mitra I, Kronmann KC, Burgess T, Deiss RG, Riddle MS, Johnson MD.

J Travel Med. 2016 Jul 4;23(5). doi: 10.1093/jtm/taw043. Print 2016 May.


Imaging of focal calvarial lesions.

Mitra I, Duraiswamy M, Benning J, Joy HM.

Clin Radiol. 2016 Apr;71(4):389-98. doi: 10.1016/j.crad.2015.12.010. Epub 2016 Feb 10. Review.


Development of a pan-serotype reverse transcription loop-mediated isothermal amplification assay for the detection of dengue virus.

Dauner AL, Mitra I, Gilliland T Jr, Seales S, Pal S, Yang SC, Guevara C, Chen JH, Liu YC, Kochel TJ, Wu SJ.

Diagn Microbiol Infect Dis. 2015 Sep;83(1):30-6. doi: 10.1016/j.diagmicrobio.2015.05.004. Epub 2015 May 15.


Evaluation of nucleic acid stabilization products for ambient temperature shipping and storage of viral RNA and antibody in a dried whole blood format.

Dauner AL, Gilliland TC, Mitra I, Pal S, Morrison AC, Hontz RD, Wu SL.

Am J Trop Med Hyg. 2015 Jul;93(1):46-53. doi: 10.4269/ajtmh.15-0110. Epub 2015 May 4.


Adaptation and validation of stroke-aphasia quality of life (SAQOL-39) scale to Hindi.

Mitra IH, Krishnan G.

Ann Indian Acad Neurol. 2015 Jan-Mar;18(1):29-32. doi: 10.4103/0972-2327.144276.


Evaluation of dengue NS1 antigen rapid tests and ELISA kits using clinical samples.

Pal S, Dauner AL, Mitra I, Forshey BM, Garcia P, Morrison AC, Halsey ES, Kochel TJ, Wu SJ.

PLoS One. 2014 Nov 20;9(11):e113411. doi: 10.1371/journal.pone.0113411. eCollection 2014.


Design, synthesis and exploring the quantitative structure-activity relationship of some antioxidant flavonoid analogues.

Das S, Mitra I, Batuta S, Niharul Alam M, Roy K, Begum NA.

Bioorg Med Chem Lett. 2014 Nov 1;24(21):5050-4. doi: 10.1016/j.bmcl.2014.09.028. Epub 2014 Sep 17.


Laparoscopic removal of persistent muellerian duct structures and orchiopexy.

Mitra D, Mitra I.

J Indian Med Assoc. 2013 Sep;111(9):619-20.


Interplay between base excision repair activity and toxicity of 3-methyladenine DNA glycosylases in an E. coli complementation system.

Troll CJ, Adhikary S, Cueff M, Mitra I, Eichman BF, Camps M.

Mutat Res. 2014 May-Jun;763-764:64-73. doi: 10.1016/j.mrfmmm.2014.03.007. Epub 2014 Apr 4.


Microchip electrophoresis at elevated temperatures and high separation field strengths.

Mitra I, Marczak SP, Jacobson SC.

Electrophoresis. 2014 Feb;35(2-3):374-8. doi: 10.1002/elps.201300427. Epub 2013 Nov 20.


Comparative profiling of N-glycans isolated from serum samples of ovarian cancer patients and analyzed by microchip electrophoresis.

Mitra I, Alley WR Jr, Goetz JA, Vasseur JA, Novotny MV, Jacobson SC.

J Proteome Res. 2013 Oct 4;12(10):4490-6. doi: 10.1021/pr400549e. Epub 2013 Aug 28.


Predictive Modeling of Antioxidant Coumarin Derivatives Using Multiple Approaches: Descriptor-Based QSAR, 3D-Pharmacophore Mapping, and HQSAR.

Mitra I, Saha A, Roy K.

Sci Pharm. 2013 Jan-Mar;81(1):57-80. doi: 10.3797/scipharm.1208-01. Epub 2012 Sep 9.


Namaste position-an option for patient position in pediatric anorectal surgeries.

Mitra D, Mitra I, Bhattacharyya S.

J Indian Assoc Pediatr Surg. 2013 Jan;18(1):41-2. doi: 10.4103/0971-9261.107020. No abstract available.


Some case studies on application of "r(m)2" metrics for judging quality of quantitative structure-activity relationship predictions: emphasis on scaling of response data.

Roy K, Chakraborty P, Mitra I, Ojha PK, Kar S, Das RN.

J Comput Chem. 2013 May 5;34(12):1071-82. doi: 10.1002/jcc.23231. Epub 2013 Jan 8.


Lead Hopping for PfDHODH Inhibitors as Antimalarials Based on Pharmacophore Mapping, Molecular Docking and Comparative Binding Energy Analysis (COMBINE): A Three-Layered Virtual Screening Approach.

Kumar Ojha P, Mitra I, Kar S, Narayan Das R, Roy K.

Mol Inform. 2012 Oct;31(10):711-8. doi: 10.1002/minf.201200045. Epub 2012 Sep 7. No abstract available.


Generalized Linear and Mixed Models for Label-Free Shotgun Proteomics.

Leitch MC, Mitra I, Sadygov RG.

Stat Interface. 2012;5(1):89-98.


The prevalence of laryngopharyngeal reflux in the English population.

Kamani T, Penney S, Mitra I, Pothula V.

Eur Arch Otorhinolaryngol. 2012 Oct;269(10):2219-25. doi: 10.1007/s00405-012-2028-1. Epub 2012 May 11.


Electrotopological state atom (E-state) index in drug design, QSAR, property prediction and toxicity assessment.

Roy K, Mitra I.

Curr Comput Aided Drug Des. 2012 Jun;8(2):135-58. Review.


Improved mass defect model for theoretical tryptic peptides.

Mitra I, Nefedov AV, Brasier AR, Sadygov RG.

Anal Chem. 2012 Mar 20;84(6):3026-32. doi: 10.1021/ac203255e. Epub 2012 Mar 7.


N-glycan profiling by microchip electrophoresis to differentiate disease states related to esophageal adenocarcinoma.

Mitra I, Zhuang Z, Zhang Y, Yu CY, Hammoud ZT, Tang H, Mechref Y, Jacobson SC.

Anal Chem. 2012 Apr 17;84(8):3621-7. doi: 10.1021/ac203431s. Epub 2012 Apr 3.


Comparative studies on some metrics for external validation of QSPR models.

Roy K, Mitra I, Kar S, Ojha PK, Das RN, Kabir H.

J Chem Inf Model. 2012 Feb 27;52(2):396-408. doi: 10.1021/ci200520g. Epub 2012 Jan 17.


Nanofluidic devices with two pores in series for resistive-pulse sensing of single virus capsids.

Harms ZD, Mogensen KB, Nunes PS, Zhou K, Hildenbrand BW, Mitra I, Tan Z, Zlotnick A, Kutter JP, Jacobson SC.

Anal Chem. 2011 Dec 15;83(24):9573-8. doi: 10.1021/ac202358t. Epub 2011 Nov 11.


Probabilistic polynomial dynamical systems for reverse engineering of gene regulatory networks.

Dimitrova ES, Mitra I, Jarrah AS.

EURASIP J Bioinform Syst Biol. 2011 Jun 6;2011(1):1. doi: 10.1186/1687-4153-2011-1.


Development of multiple QSAR models for consensus predictions and unified mechanistic interpretations of the free-radical scavenging activities of chromone derivatives.

Mitra I, Saha A, Roy K.

J Mol Model. 2012 May;18(5):1819-40. doi: 10.1007/s00894-011-1198-x. Epub 2011 Aug 18.


Examining troughs in the mass distribution of all theoretically possible tryptic peptides.

Nefedov AV, Mitra I, Brasier AR, Sadygov RG.

J Proteome Res. 2011 Sep 2;10(9):4150-7. doi: 10.1021/pr2003177. Epub 2011 Aug 9.


Chemometric QSAR modeling and in silico design of antioxidant NO donor phenols.

Mitra I, Saha A, Roy K.

Sci Pharm. 2011 Jan-Mar;79(1):31-57. doi: 10.3797/scipharm.1011-02. Epub 2010 Dec 2.


Adult day case tonsillectomy: an audit cycle.

Achar P, Mitra I, Izzat S, Kumar B.

J Eval Clin Pract. 2011 Apr;17(2):319-21. doi: 10.1111/j.1365-2753.2010.01427.x. Epub 2010 Sep 22. No abstract available.


Microchip electrophoresis of N-glycans on serpentine separation channels with asymmetrically tapered turns.

Zhuang Z, Mitra I, Hussein A, Novotny MV, Mechref Y, Jacobson SC.

Electrophoresis. 2011 Jan;32(2):246-53. doi: 10.1002/elps.201000461.


Effect of central compartment neck dissection on hypocalcaemia incidence after total thyroidectomy for carcinoma.

Mitra I, Nichani JR, Yap B, Homer JJ.

J Laryngol Otol. 2011 May;125(5):497-501. doi: 10.1017/S0022215110002471. Epub 2010 Nov 25.


Chemometric modeling of free radical scavenging activity of flavone derivatives.

Mitra I, Saha A, Roy K.

Eur J Med Chem. 2010 Nov;45(11):5071-9. doi: 10.1016/j.ejmech.2010.08.016. Epub 2010 Aug 12.


Intention to treat analysis: how frequently is it used in ENT randomised controlled trials?

Achar P, Mitra I, Duvvi S, Kumar BN.

Clin Otolaryngol. 2010 Feb;35(1):65-7. doi: 10.1111/j.1749-4486.2009.02073.x. Review. No abstract available.


Pharmacophore mapping of arylamino-substituted benzo[b]thiophenes as free radical scavengers.

Mitra I, Saha A, Roy K.

J Mol Model. 2010 Oct;16(10):1585-96. doi: 10.1007/s00894-010-0661-4. Epub 2010 Mar 1.


Advances in quantitative structure-activity relationship models of antioxidants.

Roy K, Mitra I.

Expert Opin Drug Discov. 2009 Nov;4(11):1157-75. doi: 10.1517/17460440903307409.


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