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Items: 1 to 50 of 118

1.

Oral transfer of chemical cues, growth proteins and hormones in social insects.

LeBoeuf AC, Waridel P, Brent CS, Gonçalves AN, Menin L, Ortiz D, Riba-Grognuz O, Koto A, Soares ZG, Privman E, Miska EA, Benton R, Keller L.

Elife. 2019 Aug 19;8. pii: e51082. doi: 10.7554/eLife.51082.

2.

Publisher Correction: Sequencing cell-type-specific transcriptomes with SLAM-ITseq.

Matsushima W, Herzog VA, Neumann T, Gapp K, Zuber J, Ameres SL, Miska EA.

Nat Protoc. 2019 Aug;14(8):2597. doi: 10.1038/s41596-019-0224-9.

PMID:
31296964
3.

NSUN2 introduces 5-methylcytosines in mammalian mitochondrial tRNAs.

Van Haute L, Lee SY, McCann BJ, Powell CA, Bansal D, Vasiliauskaitė L, Garone C, Shin S, Kim JS, Frye M, Gleeson JG, Miska EA, Rhee HW, Minczuk M.

Nucleic Acids Res. 2019 Jul 5. pii: gkz559. doi: 10.1093/nar/gkz559. [Epub ahead of print]

PMID:
31276587
4.

Sequencing cell-type-specific transcriptomes with SLAM-ITseq.

Matsushima W, Herzog VA, Neumann T, Gapp K, Zuber J, Ameres SL, Miska EA.

Nat Protoc. 2019 Aug;14(8):2261-2278. doi: 10.1038/s41596-019-0179-x. Epub 2019 Jun 26. Erratum in: Nat Protoc. 2019 Jul 11;:.

PMID:
31243395
5.

Mature sperm small-RNA profile in the sparrow: implications for transgenerational effects of age on fitness.

Matsushima W, Brink K, Schroeder J, Miska EA, Gapp K.

Environ Epigenet. 2019 May 21;5(2):dvz007. doi: 10.1093/eep/dvz007. eCollection 2019 Apr.

6.

A Secreted RNA Binding Protein Forms RNA-Stabilizing Granules in the Honeybee Royal Jelly.

Maori E, Navarro IC, Boncristiani H, Seilly DJ, Rudolph KLM, Sapetschnig A, Lin CC, Ladbury JE, Evans JD, Heeney JL, Miska EA.

Mol Cell. 2019 May 2;74(3):598-608.e6. doi: 10.1016/j.molcel.2019.03.010. Epub 2019 Apr 18.

7.

Identification of functional long non-coding RNAs in C. elegans.

Akay A, Jordan D, Navarro IC, Wrzesinski T, Ponting CP, Miska EA, Haerty W.

BMC Biol. 2019 Feb 18;17(1):14. doi: 10.1186/s12915-019-0635-7.

8.

Tissue- and sex-specific small RNAomes reveal sex differences in response to the environment.

Bezler A, Braukmann F, West SM, Duplan A, Conconi R, Schütz F, Gönczy P, Piano F, Gunsalus K, Miska EA, Keller L.

PLoS Genet. 2019 Feb 8;15(2):e1007905. doi: 10.1371/journal.pgen.1007905. eCollection 2019 Feb.

9.

The USTC co-opts an ancient machinery to drive piRNA transcription in C. elegans.

Weng C, Kosalka J, Berkyurek AC, Stempor P, Feng X, Mao H, Zeng C, Li WJ, Yan YH, Dong MQ, Morero NR, Zuliani C, Barabas O, Ahringer J, Guang S, Miska EA.

Genes Dev. 2019 Jan 1;33(1-2):90-102. doi: 10.1101/gad.319293.118. Epub 2018 Dec 19.

10.

Whole-genome sequences of Malawi cichlids reveal multiple radiations interconnected by gene flow.

Malinsky M, Svardal H, Tyers AM, Miska EA, Genner MJ, Turner GF, Durbin R.

Nat Ecol Evol. 2018 Dec;2(12):1940-1955. doi: 10.1038/s41559-018-0717-x. Epub 2018 Nov 19.

11.

Alterations in sperm long RNA contribute to the epigenetic inheritance of the effects of postnatal trauma.

Gapp K, van Steenwyk G, Germain PL, Matsushima W, Rudolph KLM, Manuella F, Roszkowski M, Vernaz G, Ghosh T, Pelczar P, Mansuy IM, Miska EA.

Mol Psychiatry. 2018 Oct 30. doi: 10.1038/s41380-018-0271-6. [Epub ahead of print]

PMID:
30374190
12.

COMRADES determines in vivo RNA structures and interactions.

Ziv O, Gabryelska MM, Lun ATL, Gebert LFR, Sheu-Gruttadauria J, Meredith LW, Liu ZY, Kwok CK, Qin CF, MacRae IJ, Goodfellow I, Marioni JC, Kudla G, Miska EA.

Nat Methods. 2018 Oct;15(10):785-788. doi: 10.1038/s41592-018-0121-0. Epub 2018 Sep 10.

13.

Terminal uridylyltransferases target RNA viruses as part of the innate immune system.

Le Pen J, Jiang H, Di Domenico T, Kneuss E, Kosałka J, Leung C, Morgan M, Much C, Rudolph KLM, Enright AJ, O'Carroll D, Wang D, Miska EA.

Nat Struct Mol Biol. 2018 Sep;25(9):778-786. doi: 10.1038/s41594-018-0106-9. Epub 2018 Aug 13.

14.

Natural Genetic Variation in a Multigenerational Phenotype in C. elegans.

Frézal L, Demoinet E, Braendle C, Miska E, Félix MA.

Curr Biol. 2018 Aug 20;28(16):2588-2596.e8. doi: 10.1016/j.cub.2018.05.091. Epub 2018 Aug 2.

15.

SLAM-ITseq: sequencing cell type-specific transcriptomes without cell sorting.

Matsushima W, Herzog VA, Neumann T, Gapp K, Zuber J, Ameres SL, Miska EA.

Development. 2018 Jul 11;145(13). pii: dev164640. doi: 10.1242/dev.164640.

16.

Pan-arthropod analysis reveals somatic piRNAs as an ancestral defence against transposable elements.

Lewis SH, Quarles KA, Yang Y, Tanguy M, Frézal L, Smith SA, Sharma PP, Cordaux R, Gilbert C, Giraud I, Collins DH, Zamore PD, Miska EA, Sarkies P, Jiggins FM.

Nat Ecol Evol. 2018 Jan;2(1):174-181. doi: 10.1038/s41559-017-0403-4. Epub 2017 Dec 4.

17.

Correction: A team of heterochromatin factors collaborates with small RNA pathways to combat repetitive elements and germline stress.

McMurchy AN, Stempor P, Gaarenstroom T, Wysolmerski B, Dong Y, Aussianikava D, Appert A, Huang N, Kolasinska-Zwierz P, Sapetschnig A, Miska EA, Ahringer J.

Elife. 2017 Oct 5;6. pii: e32516. doi: 10.7554/eLife.32516. No abstract available.

18.

An Alternative STAT Signaling Pathway Acts in Viral Immunity in Caenorhabditis elegans.

Tanguy M, Véron L, Stempor P, Ahringer J, Sarkies P, Miska EA.

MBio. 2017 Sep 5;8(5). pii: e00924-17. doi: 10.1128/mBio.00924-17.

19.

The Helicase Aquarius/EMB-4 Is Required to Overcome Intronic Barriers to Allow Nuclear RNAi Pathways to Heritably Silence Transcription.

Akay A, Di Domenico T, Suen KM, Nabih A, Parada GE, Larance M, Medhi R, Berkyurek AC, Zhang X, Wedeles CJ, Rudolph KLM, Engelhardt J, Hemberg M, Ma P, Lamond AI, Claycomb JM, Miska EA.

Dev Cell. 2017 Aug 7;42(3):241-255.e6. doi: 10.1016/j.devcel.2017.07.002.

20.

The Profile and Dynamics of RNA Modifications in Animals.

van Delft P, Akay A, Huber SM, Bueschl C, Rudolph KLM, Di Domenico T, Schuhmacher R, Miska EA, Balasubramanian S.

Chembiochem. 2017 Jun 1;18(11):979-984. doi: 10.1002/cbic.201700093. Epub 2017 Apr 27.

21.

Artificial and natural RNA interactions between bacteria and C. elegans.

Braukmann F, Jordan D, Miska E.

RNA Biol. 2017 Apr 3;14(4):415-420. doi: 10.1080/15476286.2017.1297912. Epub 2017 Mar 23. Review.

22.

A team of heterochromatin factors collaborates with small RNA pathways to combat repetitive elements and germline stress.

McMurchy AN, Stempor P, Gaarenstroom T, Wysolmerski B, Dong Y, Aussianikava D, Appert A, Huang N, Kolasinska-Zwierz P, Sapetschnig A, Miska EA, Ahringer J.

Elife. 2017 Mar 15;6. pii: e21666. doi: 10.7554/eLife.21666. Erratum in: Elife. 2017 Oct 05;6:.

23.

miR-182 Regulates Slit2-Mediated Axon Guidance by Modulating the Local Translation of a Specific mRNA.

Bellon A, Iyer A, Bridi S, Lee FCY, Ovando-Vázquez C, Corradi E, Longhi S, Roccuzzo M, Strohbuecker S, Naik S, Sarkies P, Miska E, Abreu-Goodger C, Holt CE, Baudet ML.

Cell Rep. 2017 Jan 31;18(5):1171-1186. doi: 10.1016/j.celrep.2016.12.093.

24.

2'-O-Methyl-5-hydroxymethylcytidine: A Second Oxidative Derivative of 5-Methylcytidine in RNA.

Huber SM, van Delft P, Tanpure A, Miska EA, Balasubramanian S.

J Am Chem Soc. 2017 Feb 8;139(5):1766-1769. doi: 10.1021/jacs.6b12180. Epub 2017 Jan 25.

25.

Oral transfer of chemical cues, growth proteins and hormones in social insects.

LeBoeuf AC, Waridel P, Brent CS, Gonçalves AN, Menin L, Ortiz D, Riba-Grognuz O, Koto A, Soares ZG, Privman E, Miska EA, Benton R, Keller L.

Elife. 2016 Nov 29;5. pii: e20375. doi: 10.7554/eLife.20375. Erratum in: Elife. 2019 Aug 19;8:.

26.

Transgenerational inheritance: Models and mechanisms of non-DNA sequence-based inheritance.

Miska EA, Ferguson-Smith AC.

Science. 2016 Oct 7;354(6308):59-63. Review.

PMID:
27846492
27.

Identification of small molecule inhibitors of the Lin28-mediated blockage of pre-let-7g processing.

Lightfoot HL, Miska EA, Balasubramanian S.

Org Biomol Chem. 2016 Nov 2;14(43):10208-10216. doi: 10.1039/c6ob01945e.

28.

Wolbachia Blocks Viral Genome Replication Early in Infection without a Transcriptional Response by the Endosymbiont or Host Small RNA Pathways.

Rainey SM, Martinez J, McFarlane M, Juneja P, Sarkies P, Lulla A, Schnettler E, Varjak M, Merits A, Miska EA, Jiggins FM, Kohl A.

PLoS Pathog. 2016 Apr 18;12(4):e1005536. doi: 10.1371/journal.ppat.1005536. eCollection 2016 Apr. Erratum in: PLoS Pathog. 2016 May;12(5):e1005639.

29.

tRNA fragments: novel players in intergenerational inheritance.

Gapp K, Miska EA.

Cell Res. 2016 Apr;26(4):395-6. doi: 10.1038/cr.2016.24. Epub 2016 Feb 23.

30.

Selective inhibitors of trypanosomal uridylyl transferase RET1 establish druggability of RNA post-transcriptional modifications.

Cording A, Gormally M, Bond PJ, Carrington M, Balasubramanian S, Miska EA, Thomas B.

RNA Biol. 2017 May 4;14(5):611-619. doi: 10.1080/15476286.2015.1137422. Epub 2016 Jan 20.

31.

Genomic islands of speciation separate cichlid ecomorphs in an East African crater lake.

Malinsky M, Challis RJ, Tyers AM, Schiffels S, Terai Y, Ngatunga BP, Miska EA, Durbin R, Genner MJ, Turner GF.

Science. 2015 Dec 18;350(6267):1493-1498. doi: 10.1126/science.aac9927.

32.

Antiviral RNA Interference against Orsay Virus Is neither Systemic nor Transgenerational in Caenorhabditis elegans.

Ashe A, Sarkies P, Le Pen J, Tanguy M, Miska EA.

J Virol. 2015 Dec;89(23):12035-46. doi: 10.1128/JVI.03664-14. Epub 2015 Sep 23.

33.

E. coli OxyS non-coding RNA does not trigger RNAi in C. elegans.

Akay A, Sarkies P, Miska EA.

Sci Rep. 2015 Apr 15;5:9597. doi: 10.1038/srep09597.

34.

Tertiary siRNAs mediate paramutation in C. elegans.

Sapetschnig A, Sarkies P, Lehrbach NJ, Miska EA.

PLoS Genet. 2015 Mar 26;11(3):e1005078. doi: 10.1371/journal.pgen.1005078. eCollection 2015 Mar.

35.

Formation and abundance of 5-hydroxymethylcytosine in RNA.

Huber SM, van Delft P, Mendil L, Bachman M, Smollett K, Werner F, Miska EA, Balasubramanian S.

Chembiochem. 2015 Mar 23;16(5):752-5. doi: 10.1002/cbic.201500013. Epub 2015 Feb 12.

36.

Ancient and novel small RNA pathways compensate for the loss of piRNAs in multiple independent nematode lineages.

Sarkies P, Selkirk ME, Jones JT, Blok V, Boothby T, Goldstein B, Hanelt B, Ardila-Garcia A, Fast NM, Schiffer PM, Kraus C, Taylor MJ, Koutsovoulos G, Blaxter ML, Miska EA.

PLoS Biol. 2015 Feb 10;13(2):e1002061. doi: 10.1371/journal.pbio.1002061. eCollection 2015 Feb.

37.

Caenorhabditis elegans RSD-2 and RSD-6 promote germ cell immortality by maintaining small interfering RNA populations.

Sakaguchi A, Sarkies P, Simon M, Doebley AL, Goldstein LD, Hedges A, Ikegami K, Alvares SM, Yang L, LaRocque JR, Hall J, Miska EA, Ahmed S.

Proc Natl Acad Sci U S A. 2014 Oct 14;111(41):E4323-31. doi: 10.1073/pnas.1406131111. Epub 2014 Sep 25.

38.

The genomic substrate for adaptive radiation in African cichlid fish.

Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alföldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleton KL, Conte MA, D'Cotta H, Eshel O, Gaffney L, Galibert F, Gante HF, Gnerre S, Greuter L, Guyon R, Haddad NS, Haerty W, Harris RM, Hofmann HA, Hourlier T, Hulata G, Jaffe DB, Lara M, Lee AP, MacCallum I, Mwaiko S, Nikaido M, Nishihara H, Ozouf-Costaz C, Penman DJ, Przybylski D, Rakotomanga M, Renn SCP, Ribeiro FJ, Ron M, Salzburger W, Sanchez-Pulido L, Santos ME, Searle S, Sharpe T, Swofford R, Tan FJ, Williams L, Young S, Yin S, Okada N, Kocher TD, Miska EA, Lander ES, Venkatesh B, Fernald RD, Meyer A, Ponting CP, Streelman JT, Lindblad-Toh K, Seehausen O, Di Palma F.

Nature. 2014 Sep 18;513(7518):375-381. doi: 10.1038/nature13726. Epub 2014 Sep 3.

39.

piRNAs: from biogenesis to function.

Weick EM, Miska EA.

Development. 2014 Sep;141(18):3458-71. doi: 10.1242/dev.094037. Review.

40.

Considerations when investigating lncRNA function in vivo.

Bassett AR, Akhtar A, Barlow DP, Bird AP, Brockdorff N, Duboule D, Ephrussi A, Ferguson-Smith AC, Gingeras TR, Haerty W, Higgs DR, Miska EA, Ponting CP.

Elife. 2014 Aug 14;3:e03058. doi: 10.7554/eLife.03058. Review.

41.

Small RNAs break out: the molecular cell biology of mobile small RNAs.

Sarkies P, Miska EA.

Nat Rev Mol Cell Biol. 2014 Aug;15(8):525-35. doi: 10.1038/nrm3840. Review.

PMID:
25053358
42.

Getting a grip on piRNA cluster transcription.

Sapetschnig A, Miska EA.

Cell. 2014 Jun 5;157(6):1253-4. doi: 10.1016/j.cell.2014.05.022.

43.

Reduced insulin/IGF-1 signaling restores germ cell immortality to Caenorhabditis elegans Piwi mutants.

Simon M, Sarkies P, Ikegami K, Doebley AL, Goldstein LD, Mitchell J, Sakaguchi A, Miska EA, Ahmed S.

Cell Rep. 2014 May 8;7(3):762-73. doi: 10.1016/j.celrep.2014.03.056. Epub 2014 Apr 24.

44.

Implication of sperm RNAs in transgenerational inheritance of the effects of early trauma in mice.

Gapp K, Jawaid A, Sarkies P, Bohacek J, Pelczar P, Prados J, Farinelli L, Miska E, Mansuy IM.

Nat Neurosci. 2014 May;17(5):667-9. doi: 10.1038/nn.3695. Epub 2014 Apr 13.

45.

PRDE-1 is a nuclear factor essential for the biogenesis of Ruby motif-dependent piRNAs in C. elegans.

Weick EM, Sarkies P, Silva N, Chen RA, Moss SM, Cording AC, Ahringer J, Martinez-Perez E, Miska EA.

Genes Dev. 2014 Apr 1;28(7):783-96. doi: 10.1101/gad.238105.114.

46.

RNA-binding protein GLD-1/quaking genetically interacts with the mir-35 and the let-7 miRNA pathways in Caenorhabditis elegans.

Akay A, Craig A, Lehrbach N, Larance M, Pourkarimi E, Wright JE, Lamond A, Miska E, Gartner A.

Open Biol. 2013 Nov 20;3(11):130151. doi: 10.1098/rsob.130151.

47.

Betaine acts on a ligand-gated ion channel in the nervous system of the nematode C. elegans.

Peden AS, Mac P, Fei YJ, Castro C, Jiang G, Murfitt KJ, Miska EA, Griffin JL, Ganapathy V, Jorgensen EM.

Nat Neurosci. 2013 Dec;16(12):1794-801. doi: 10.1038/nn.3575. Epub 2013 Nov 10. Erratum in: Nat Neurosci. 2014 Dec;17(12):1840.

48.

Antiviral RNA interference in animals: piecing together the evidence.

Tanguy M, Miska EA.

Nat Struct Mol Biol. 2013 Nov;20(11):1239-41. doi: 10.1038/nsmb.2708. No abstract available.

PMID:
24197164
49.

A deletion polymorphism in the Caenorhabditis elegans RIG-I homolog disables viral RNA dicing and antiviral immunity.

Ashe A, Bélicard T, Le Pen J, Sarkies P, Frézal L, Lehrbach NJ, Félix MA, Miska EA.

Elife. 2013 Oct 8;2:e00994. doi: 10.7554/eLife.00994.

50.

Small RNA profiling of Xenopus embryos reveals novel miRNAs and a new class of small RNAs derived from intronic transposable elements.

Harding JL, Horswell S, Heliot C, Armisen J, Zimmerman LB, Luscombe NM, Miska EA, Hill CS.

Genome Res. 2014 Jan;24(1):96-106. doi: 10.1101/gr.144469.112. Epub 2013 Sep 24.

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