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Items: 1 to 50 of 316

1.

Models of Intracellular Transport: Pros and Cons.

Mironov AA, Beznoussenko GV.

Front Cell Dev Biol. 2019 Aug 7;7:146. doi: 10.3389/fcell.2019.00146. eCollection 2019.

2.

Role of Intracellular Transport in the Centriole-Dependent Formation of Golgi Ribbon.

Mironov AA, Dimov ID, Beznoussenko GV.

Results Probl Cell Differ. 2019;67:49-79. doi: 10.1007/978-3-030-23173-6_4. Review.

PMID:
31435792
3.

Redundant and nonredundant organismal functions of EPS15 and EPS15L1.

Milesi C, Alberici P, Pozzi B, Oldani A, Beznoussenko GV, Raimondi A, Soppo BE, Amodio S, Caldieri G, Malabarba MG, Bertalot G, Confalonieri S, Parazzoli D, Mironov AA, Tacchetti C, Di Fiore PP, Sigismund S, Offenhäuser N.

Life Sci Alliance. 2019 Jan 28;2(1). pii: e201800273. doi: 10.26508/lsa.201800273. Print 2019 Feb.

4.

GORAB scaffolds COPI at the trans-Golgi for efficient enzyme recycling and correct protein glycosylation.

Witkos TM, Chan WL, Joensuu M, Rhiel M, Pallister E, Thomas-Oates J, Mould AP, Mironov AA, Biot C, Guerardel Y, Morelle W, Ungar D, Wieland FT, Jokitalo E, Tassabehji M, Kornak U, Lowe M.

Nat Commun. 2019 Jan 10;10(1):127. doi: 10.1038/s41467-018-08044-6.

5.

Fine-Tuning of Sox17 and Canonical Wnt Coordinates the Permeability Properties of the Blood-Brain Barrier.

Corada M, Orsenigo F, Bhat GP, Conze LL, Breviario F, Cunha SI, Claesson-Welsh L, Beznoussenko GV, Mironov AA, Bacigaluppi M, Martino G, Pitulescu ME, Adams RH, Magnusson P, Dejana E.

Circ Res. 2019 Feb 15;124(4):511-525. doi: 10.1161/CIRCRESAHA.118.313316.

6.

Distribution of superparamagnetic Au/Fe nanoparticles in an isolated guinea pig brain with an intact blood brain barrier.

Sanavio B, Librizzi L, Pennacchio P, Beznoussenko GV, Sousa F, Silva PJ, Mironov AA, Frassoni C, Stellacci F, de Curtis M, Krol S.

Nanoscale. 2018 Dec 21;10(47):22420-22428. doi: 10.1039/c8nr07182a. Epub 2018 Nov 26.

PMID:
30475372
7.

GAPDH inhibits intracellular pathways during starvation for cellular energy homeostasis.

Yang JS, Hsu JW, Park SY, Li J, Oldham WM, Beznoussenko GV, Mironov AA, Loscalzo J, Hsu VW.

Nature. 2018 Sep;561(7722):263-267. doi: 10.1038/s41586-018-0475-6. Epub 2018 Sep 12.

8.

Integrating Rio1 activities discloses its nutrient-activated network in Saccharomyces cerevisiae.

Iacovella MG, Bremang M, Basha O, Giacò L, Carotenuto W, Golfieri C, Szakal B, Dal Maschio M, Infantino V, Beznoussenko GV, Joseph CR, Visintin C, Mironov AA, Visintin R, Branzei D, Ferreira-Cerca S, Yeger-Lotem E, De Wulf P.

Nucleic Acids Res. 2018 Sep 6;46(15):7586-7611. doi: 10.1093/nar/gky618.

9.

Coloc-stats: a unified web interface to perform colocalization analysis of genomic features.

Simovski B, Kanduri C, Gundersen S, Titov D, Domanska D, Bock C, Bossini-Castillo L, Chikina M, Favorov A, Layer RM, Mironov AA, Quinlan AR, Sheffield NC, Trynka G, Sandve GK.

Nucleic Acids Res. 2018 Jul 2;46(W1):W186-W193. doi: 10.1093/nar/gky474.

10.

Analysis of Dynamic Geometric Configuration of the Aortic Channel from the Perspective of Tornado-Like Flow Organization of Blood Flow.

Zhorzholiani ST, Mironov AA, Talygin EA, Tsyganokov YM, Agafonov AM, Kiknadze GI, Gorodkov AY, Bokeriya LA.

Bull Exp Biol Med. 2018 Mar;164(4):514-518. doi: 10.1007/s10517-018-4023-z. Epub 2018 Mar 5.

PMID:
29504108
11.

FACS Isolation of Viable Cells in Different Cell Cycle Stages from Asynchronous Culture for RNA Sequencing.

Potashnikova DM, Golyshev SA, Penin AA, Logacheva MD, Klepikova AV, Zharikova AA, Mironov AA, Sheval EV, Vorobjev IA.

Methods Mol Biol. 2018;1745:315-335. doi: 10.1007/978-1-4939-7680-5_18.

PMID:
29476477
12.

StereoGene: rapid estimation of genome-wide correlation of continuous or interval feature data.

Stavrovskaya ED, Niranjan T, Fertig EJ, Wheelan SJ, Favorov AV, Mironov AA.

Bioinformatics. 2017 Oct 15;33(20):3158-3165. doi: 10.1093/bioinformatics/btx379.

13.

Differential processing of small RNAs during endoplasmic reticulum stress.

Mesitov MV, Soldatov RA, Zaichenko DM, Malakho SG, Klementyeva TS, Sokolovskaya AA, Kubatiev AA, Mironov AA, Moskovtsev AA.

Sci Rep. 2017 Apr 13;7:46080. doi: 10.1038/srep46080.

14.

[Chromatin and Polycomb: Biology and bioinformatics].

Kudrin RA, Mironov AA, Stavrovskaya ED.

Mol Biol (Mosk). 2017 Jan-Feb;51(1):18-30. doi: 10.7868/S0026898416060124. Review. Russian.

15.

Compensatory Evolution of Intrinsic Transcription Terminators in Bacillus Cereus.

Safina KR, Mironov AA, Bazykin GA.

Genome Biol Evol. 2017 Feb 1;9(2):340-349. doi: 10.1093/gbe/evw295.

16.

MIF/CD74 axis is a target for novel therapies in colon carcinomatosis.

Bozzi F, Mogavero A, Varinelli L, Belfiore A, Manenti G, Caccia C, Volpi CC, Beznoussenko GV, Milione M, Leoni V, Gloghini A, Mironov AA, Leo E, Pilotti S, Pierotti MA, Bongarzone I, Gariboldi M.

J Exp Clin Cancer Res. 2017 Jan 23;36(1):16. doi: 10.1186/s13046-016-0475-z.

17.

Application of organic acids for plant protection against phytopathogens.

Morgunov IG, Kamzolova SV, Dedyukhina EG, Chistyakova TI, Lunina JN, Mironov AA, Stepanova NN, Shemshura ON, Vainshtein MB.

Appl Microbiol Biotechnol. 2017 Feb;101(3):921-932. doi: 10.1007/s00253-016-8067-6. Epub 2016 Dec 31. Review.

PMID:
28040844
18.

Different Golgi ultrastructure across species and tissues: Implications under functional and pathological conditions, and an attempt at classification.

Mironov AA, Sesorova IS, Seliverstova EV, Beznoussenko GV.

Tissue Cell. 2017 Apr;49(2 Pt A):186-201. doi: 10.1016/j.tice.2016.12.002. Epub 2016 Dec 10. Review.

PMID:
28007425
19.

[To the question about a possibility of use ultra-light titanium- containing mesh in abdominal wall repair in contaminated fields (experimental study)].

Parshikov VV, Mironov AA, Anikina EA, Kazantsev AA, Zaslavskaya MI, Alyokhin AI.

Khirurgiia (Mosk). 2016;(11):64-70. doi: 10.17116/hirurgia20161164-70. Russian. No abstract available.

PMID:
27905376
20.

Application of sorting and next generation sequencing to study 5΄-UTR influence on translation efficiency in Escherichia coli.

Evfratov SA, Osterman IA, Komarova ES, Pogorelskaya AM, Rubtsova MP, Zatsepin TS, Semashko TA, Kostryukova ES, Mironov AA, Burnaev E, Krymova E, Gelfand MS, Govorun VM, Bogdanov AA, Sergiev PV, Dontsova OA.

Nucleic Acids Res. 2017 Apr 7;45(6):3487-3502. doi: 10.1093/nar/gkw1141.

21.

An essential step of kinetochore formation controlled by the SNARE protein Snap29.

Morelli E, Mastrodonato V, Beznoussenko GV, Mironov AA, Tognon E, Vaccari T.

EMBO J. 2016 Oct 17;35(20):2223-2237. Epub 2016 Sep 19.

22.

Three-dimensional and immune electron microscopic analysis of the secretory pathway in Saccharomyces cerevisiae.

Beznoussenko GV, Ragnini-Wilson A, Wilson C, Mironov AA.

Histochem Cell Biol. 2016 Nov;146(5):515-527. Epub 2016 Sep 3.

PMID:
27590193
23.

Identification of Position-Specific Correlations between DNA-Binding Domains and Their Binding Sites. Application to the MerR Family of Transcription Factors.

Korostelev YD, Zharov IA, Mironov AA, Rakhmaininova AB, Gelfand MS.

PLoS One. 2016 Sep 30;11(9):e0162681. doi: 10.1371/journal.pone.0162681. eCollection 2016.

24.

[Intraperitoneal and retromuscular abdominal wall repair using ultra-light and titanium-containing polypropylene mesh (experimental research)].

Parshikov VV, Mironov AA, Kazantsev AA, Alekhin AI.

Khirurgiia (Mosk). 2016;(4):40-44. doi: 10.17116/hirurgia2016440-44. Russian.

PMID:
27239913
25.

[Quantitative Evaluation of Intracardiac Blood Flow by Left Ventricle Dynamic Anatovy Based On Exact Solutions of Non-Stationary Navier-Stocks Equations for Selforganized tornado-Like Flows of Viscous Incompresssible Fluid].

Talygin EA, Zazybo NA, Zhorzholiany ST, Krestinich IM, Mironov AA, Kiknadze GI, Bokerya LA, Gorodkov AY, Makarenko VN, Alexandrova SA.

Usp Fiziol Nauk. 2016 Jan-Mar;47(1):48-68. Russian.

PMID:
27149823
26.

[piRNAs: Biology and Bioinformatics].

Zharikova AA, Mironov AA.

Mol Biol (Mosk). 2016 Jan-Feb;50(1):80-8. doi: 10.7868/S0026898416010225. Review. Russian.

27.

Probing-directed identification of novel structured RNAs.

Vinogradova SV, Sutormin RA, Mironov AA, Soldatov RA.

RNA Biol. 2016;13(2):232-42. doi: 10.1080/15476286.2015.1132140. Erratum in: RNA Biol. 2016 Aug 2;13(8):741.

28.

[The work of the Russian morphologist abroad].

Mironov AA.

Morfologiia. 2015;148(4):88-95. Russian. No abstract available.

PMID:
26601480
29.

[Evolution of non-Coding RNAs in Drosophila melanogaster Genome].

Juravleva EV, Mironov AA.

Biofizika. 2015 Sep-Oct;60(5):906-13. Russian.

PMID:
26591601
30.

Heimler Syndrome Is Caused by Hypomorphic Mutations in the Peroxisome-Biogenesis Genes PEX1 and PEX6.

Ratbi I, Falkenberg KD, Sommen M, Al-Sheqaih N, Guaoua S, Vandeweyer G, Urquhart JE, Chandler KE, Williams SG, Roberts NA, El Alloussi M, Black GC, Ferdinandusse S, Ramdi H, Heimler A, Fryer A, Lynch SA, Cooper N, Ong KR, Smith CE, Inglehearn CF, Mighell AJ, Elcock C, Poulter JA, Tischkowitz M, Davies SJ, Sefiani A, Mironov AA, Newman WG, Waterham HR, Van Camp G.

Am J Hum Genet. 2015 Oct 1;97(4):535-45. doi: 10.1016/j.ajhg.2015.08.011. Epub 2015 Sep 17.

31.

[The effect of pH, aeration, and temperature on arachidonic acid synthesis by Mortierella alpina].

Dedyukhina EG, Chistyakova TI, Mironov AA, Kamzolova SV, Minkevich IG, Vainshtein MB.

Prikl Biokhim Mikrobiol. 2015 Mar-Apr;51(2):243-50. Russian.

PMID:
26027361
32.

Inter-chromosomal contact networks provide insights into Mammalian chromatin organization.

Kaufmann S, Fuchs C, Gonik M, Khrameeva EE, Mironov AA, Frishman D.

PLoS One. 2015 May 11;10(5):e0126125. doi: 10.1371/journal.pone.0126125. eCollection 2015.

33.

Trans-membrane area asymmetry controls the shape of cellular organelles.

Beznoussenko GV, Pilyugin SS, Geerts WJ, Kozlov MM, Burger KN, Luini A, Derganc J, Mironov AA.

Int J Mol Sci. 2015 Mar 9;16(3):5299-333. doi: 10.3390/ijms16035299.

34.

Correlative video-light-electron microscopy of mobile organelles.

Beznoussenko GV, Mironov AA.

Methods Mol Biol. 2015;1270:321-46. doi: 10.1007/978-1-4939-2309-0_23.

PMID:
25702127
35.

Multiple functions of the SNARE protein Snap29 in autophagy, endocytic, and exocytic trafficking during epithelial formation in Drosophila.

Morelli E, Ginefra P, Mastrodonato V, Beznoussenko GV, Rusten TE, Bilder D, Stenmark H, Mironov AA, Vaccari T.

Autophagy. 2014;10(12):2251-68. doi: 10.4161/15548627.2014.981913.

36.

Coupling of vesicle tethering and Rab binding is required for in vivo functionality of the golgin GMAP-210.

Sato K, Roboti P, Mironov AA, Lowe M.

Mol Biol Cell. 2015 Feb 1;26(3):537-53. doi: 10.1091/mbc.E14-10-1450. Epub 2014 Dec 3.

37.

ATR mediates a checkpoint at the nuclear envelope in response to mechanical stress.

Kumar A, Mazzanti M, Mistrik M, Kosar M, Beznoussenko GV, Mironov AA, Garrè M, Parazzoli D, Shivashankar GV, Scita G, Bartek J, Foiani M.

Cell. 2014 Jul 31;158(3):633-46. doi: 10.1016/j.cell.2014.05.046.

38.

Weak negative and positive selection and the drift load at splice sites.

Denisov SV, Bazykin GA, Sutormin R, Favorov AV, Mironov AA, Gelfand MS, Kondrashov AS.

Genome Biol Evol. 2014 May 14;6(6):1437-47. doi: 10.1093/gbe/evu100.

39.

Transport of soluble proteins through the Golgi occurs by diffusion via continuities across cisternae.

Beznoussenko GV, Parashuraman S, Rizzo R, Polishchuk R, Martella O, Di Giandomenico D, Fusella A, Spaar A, Sallese M, Capestrano MG, Pavelka M, Vos MR, Rikers YG, Helms V, Mironov AA, Luini A.

Elife. 2014 May 27;3. doi: 10.7554/eLife.02009.

40.

The peculiarities of succinic acid production from rapeseed oil by Yarrowia lipolytica yeast.

Kamzolova SV, Vinokurova NG, Dedyukhina EG, Samoilenko VA, Lunina JN, Mironov AA, Allayarov RK, Morgunov IG.

Appl Microbiol Biotechnol. 2014 May;98(9):4149-57. doi: 10.1007/s00253-014-5585-y. Epub 2014 Feb 15.

PMID:
24531240
41.

ER-Golgi transport could occur in the absence of COPII vesicles.

Mironov AA.

Nat Rev Mol Cell Biol. 2014 Mar;15(3):1. doi: 10.1038/nrm3588-c1. Epub 2014 Feb 5. No abstract available.

PMID:
24496389
42.

[Genome-wide identification of functional noncoding RNAs,].

Vinogradova SV, Soldatov RA, Mironov AA.

Mol Biol (Mosk). 2013 Jul-Aug;47(4):689-96. Russian.

43.

RNASurface: fast and accurate detection of locally optimal potentially structured RNA segments.

Soldatov RA, Vinogradova SV, Mironov AA.

Bioinformatics. 2014 Feb 15;30(4):457-63. doi: 10.1093/bioinformatics/btt701. Epub 2013 Nov 28.

PMID:
24292360
44.

Golgi's way: a long path toward the new paradigm of the intra-Golgi transport.

Mironov AA, Sesorova IV, Beznoussenko GV.

Histochem Cell Biol. 2013 Oct;140(4):383-93. doi: 10.1007/s00418-013-1141-6. Epub 2013 Sep 26. Review.

PMID:
24068461
45.

Isocitric acid production from rapeseed oil by Yarrowia lipolytica yeast.

Kamzolova SV, Dedyukhina EG, Samoilenko VA, Lunina JN, Puntus IF, Allayarov RL, Chiglintseva MN, Mironov AA, Morgunov IG.

Appl Microbiol Biotechnol. 2013 Oct;97(20):9133-44. doi: 10.1007/s00253-013-5182-5. Epub 2013 Aug 29.

PMID:
23989918
46.

Hidden Markov models for evolution and comparative genomics analysis.

Bykova NA, Favorov AV, Mironov AA.

PLoS One. 2013 Jun 7;8(6):e65012. doi: 10.1371/journal.pone.0065012. Print 2013.

47.

[Statistical methods of comparative genomic analysis based on diffusion processes].

Soldatov RA, Mironov AA.

Biofizika. 2013 Mar-Apr;58(2):203-9. Russian.

PMID:
23755544
48.

Silencing of mammalian Sar1 isoforms reveals COPII-independent protein sorting and transport.

Cutrona MB, Beznoussenko GV, Fusella A, Martella O, Moral P, Mironov AA.

Traffic. 2013 Jun;14(6):691-708. doi: 10.1111/tra.12060. Epub 2013 Mar 15.

49.

Segregation of the Qb-SNAREs GS27 and GS28 into Golgi vesicles regulates intra-Golgi transport.

Fusella A, Micaroni M, Di Giandomenico D, Mironov AA, Beznoussenko GV.

Traffic. 2013 May;14(5):568-84. doi: 10.1111/tra.12055. Epub 2013 Mar 1.

50.

Base-calling algorithm with vocabulary (BCV) method for analyzing population sequencing chromatograms.

Fantin YS, Neverov AD, Favorov AV, Alvarez-Figueroa MV, Braslavskaya SI, Gordukova MA, Karandashova IV, Kuleshov KV, Myznikova AI, Polishchuk MS, Reshetov DA, Voiciehovskaya YA, Mironov AA, Chulanov VP.

PLoS One. 2013;8(1):e54835. doi: 10.1371/journal.pone.0054835. Epub 2013 Jan 28.

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