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Items: 1 to 50 of 53

1.

Development of a decerebrate model for investigating mechanisms mediating viscero-sympathetic reflexes in the spinalized rat.

Reynolds CA, O'Leary DS, Ly C, Smith SA, Minic Z.

Am J Physiol Heart Circ Physiol. 2019 Jun 1;316(6):H1332-H1340. doi: 10.1152/ajpheart.00724.2018. Epub 2019 Mar 15.

PMID:
30875256
2.

Identification and Functional Testing of Novel Interacting Protein Partners for the Stress Sensors Wsc1p and Mid2p of Saccharomyces cerevisiae.

Santiago-Cartagena E, González-Crespo S, Vélez V, Martínez N, Snider J, Jessulat M, Aoki H, Minic Z, Akamine P, Mejías I, Pérez LM, Rymond BC, Babu M, Stagljar I, Rodríguez-Medina JR.

G3 (Bethesda). 2019 Apr 9;9(4):1085-1102. doi: 10.1534/g3.118.200985.

3.
4.

Chromatographic separation strategies for precision mass spectrometry to study protein-protein interactions and protein phosphorylation.

Minic Z, Dahms TES, Babu M.

J Chromatogr B Analyt Technol Biomed Life Sci. 2018 Dec 1;1102-1103:96-108. doi: 10.1016/j.jchromb.2018.10.022. Epub 2018 Oct 24. Review.

PMID:
30380468
5.

Systems analysis of the genetic interaction network of yeast molecular chaperones.

Rizzolo K, Kumar A, Kakihara Y, Phanse S, Minic Z, Snider J, Stagljar I, Zilles S, Babu M, Houry WA.

Mol Omics. 2018 Apr 16;14(2):82-94. doi: 10.1039/C7MO00142H.

PMID:
29659649
6.

Metabolic Adaptation of a C-Terminal Protease A-Deficient Rhizobium leguminosarum in Response to Loss of Nutrient Transport.

Jun D, Minic Z, Bhat SV, Vanderlinde EM, Yost CK, Babu M, Dahms TES.

Front Microbiol. 2018 Jan 4;8:2617. doi: 10.3389/fmicb.2017.02617. eCollection 2017.

7.

Global landscape of cell envelope protein complexes in Escherichia coli.

Babu M, Bundalovic-Torma C, Calmettes C, Phanse S, Zhang Q, Jiang Y, Minic Z, Kim S, Mehla J, Gagarinova A, Rodionova I, Kumar A, Guo H, Kagan O, Pogoutse O, Aoki H, Deineko V, Caufield JH, Holtzapple E, Zhang Z, Vastermark A, Pandya Y, Lai CC, El Bakkouri M, Hooda Y, Shah M, Burnside D, Hooshyar M, Vlasblom J, Rajagopala SV, Golshani A, Wuchty S, F Greenblatt J, Saier M, Uetz P, F Moraes T, Parkinson J, Emili A.

Nat Biotechnol. 2018 Jan;36(1):103-112. doi: 10.1038/nbt.4024. Epub 2017 Nov 27.

8.
9.

A Map of Human Mitochondrial Protein Interactions Linked to Neurodegeneration Reveals New Mechanisms of Redox Homeostasis and NF-κB Signaling.

Malty RH, Aoki H, Kumar A, Phanse S, Amin S, Zhang Q, Minic Z, Goebels F, Musso G, Wu Z, Abou-Tok H, Meyer M, Deineko V, Kassir S, Sidhu V, Jessulat M, Scott NE, Xiong X, Vlasblom J, Prasad B, Foster LJ, Alberio T, Garavaglia B, Yu H, Bader GD, Nakamura K, Parkinson J, Babu M.

Cell Syst. 2017 Dec 27;5(6):564-577.e12. doi: 10.1016/j.cels.2017.10.010. Epub 2017 Nov 8.

10.

Features of the Chaperone Cellular Network Revealed through Systematic Interaction Mapping.

Rizzolo K, Huen J, Kumar A, Phanse S, Vlasblom J, Kakihara Y, Zeineddine HA, Minic Z, Snider J, Wang W, Pons C, Seraphim TV, Boczek EE, Alberti S, Costanzo M, Myers CL, Stagljar I, Boone C, Babu M, Houry WA.

Cell Rep. 2017 Sep 12;20(11):2735-2748. doi: 10.1016/j.celrep.2017.08.074.

11.

Nanoconjugate-bound adenosine A1 receptor antagonist enhances recovery of breathing following acute cervical spinal cord injury.

Minic Z, Wilson S, Liu F, Sankari A, Mao G, Goshgarian H.

Exp Neurol. 2017 Jun;292:56-62. doi: 10.1016/j.expneurol.2017.02.013. Epub 2017 Feb 20.

PMID:
28223038
12.

Transporter protein and drug-conjugated gold nanoparticles capable of bypassing the blood-brain barrier.

Zhang Y, Walker JB, Minic Z, Liu F, Goshgarian H, Mao G.

Sci Rep. 2016 May 16;6:25794. doi: 10.1038/srep25794.

13.

Transporter Protein-Coupled DPCPX Nanoconjugates Induce Diaphragmatic Recovery after SCI by Blocking Adenosine A1 Receptors.

Minic Z, Zhang Y, Mao G, Goshgarian HG.

J Neurosci. 2016 Mar 23;36(12):3441-52. doi: 10.1523/JNEUROSCI.2577-15.2016.

14.

Identification of Human Neuronal Protein Complexes Reveals Biochemical Activities and Convergent Mechanisms of Action in Autism Spectrum Disorders.

Li J, Ma Z, Shi M, Malty RH, Aoki H, Minic Z, Phanse S, Jin K, Wall DP, Zhang Z, Urban AE, Hallmayer J, Babu M, Snyder M.

Cell Syst. 2015 Nov 25;1(5):361-374.

15.

Novel Interactome of Saccharomyces cerevisiae Myosin Type II Identified by a Modified Integrated Membrane Yeast Two-Hybrid (iMYTH) Screen.

Santiago E, Akamine P, Snider J, Wong V, Jessulat M, Deineko V, Gagarinova A, Aoki H, Minic Z, Phanse S, San Antonio A, Cubano LA, Rymond BC, Babu M, Stagljar I, Rodriguez-Medina JR.

G3 (Bethesda). 2016 May 3;6(5):1469-74. doi: 10.1534/g3.115.026609.

16.

Conditional Epistatic Interaction Maps Reveal Global Functional Rewiring of Genome Integrity Pathways in Escherichia coli.

Kumar A, Beloglazova N, Bundalovic-Torma C, Phanse S, Deineko V, Gagarinova A, Musso G, Vlasblom J, Lemak S, Hooshyar M, Minic Z, Wagih O, Mosca R, Aloy P, Golshani A, Parkinson J, Emili A, Yakunin AF, Babu M.

Cell Rep. 2016 Jan 26;14(3):648-661. doi: 10.1016/j.celrep.2015.12.060. Epub 2016 Jan 8.

17.

Spindle Checkpoint Factors Bub1 and Bub2 Promote DNA Double-Strand Break Repair by Nonhomologous End Joining.

Jessulat M, Malty RH, Nguyen-Tran DH, Deineko V, Aoki H, Vlasblom J, Omidi K, Jin K, Minic Z, Hooshyar M, Burnside D, Samanfar B, Phanse S, Freywald T, Prasad B, Zhang Z, Vizeacoumar F, Krogan NJ, Freywald A, Golshani A, Babu M.

Mol Cell Biol. 2015 Jul;35(14):2448-63. doi: 10.1128/MCB.00007-15. Epub 2015 May 11.

18.

NTS adenosine A2a receptors inhibit the cardiopulmonary chemoreflex control of regional sympathetic outputs via a GABAergic mechanism.

Minic Z, O'Leary DS, Scislo TJ.

Am J Physiol Heart Circ Physiol. 2015 Jul 1;309(1):H185-97. doi: 10.1152/ajpheart.00838.2014. Epub 2015 Apr 24.

19.

Yeast mitochondrial protein-protein interactions reveal diverse complexes and disease-relevant functional relationships.

Jin K, Musso G, Vlasblom J, Jessulat M, Deineko V, Negroni J, Mosca R, Malty R, Nguyen-Tran DH, Aoki H, Minic Z, Freywald T, Phanse S, Xiang Q, Freywald A, Aloy P, Zhang Z, Babu M.

J Proteome Res. 2015 Feb 6;14(2):1220-37. doi: 10.1021/pr501148q. Epub 2015 Jan 20.

PMID:
25546499
20.

Severe hemorrhage attenuates cardiopulmonary chemoreflex control of regional sympathetic outputs via NTS adenosine receptors.

Minic Z, Li C, O'Leary DS, Scislo TJ.

Am J Physiol Heart Circ Physiol. 2014 Sep 15;307(6):H904-9. doi: 10.1152/ajpheart.00234.2014. Epub 2014 Jul 25.

21.

The phytoalexin camalexin induces fundamental changes in the proteome of Alternaria brassicicola different from those caused by brassinin.

Pedras MS, Minic Z, Abdoli A.

Fungal Biol. 2014 Jan;118(1):83-93. doi: 10.1016/j.funbio.2013.11.005. Epub 2013 Dec 1.

PMID:
24433679
22.

The phytoalexins brassilexin and camalexin inhibit cyclobrassinin hydrolase, a unique enzyme from the fungal pathogen Alternaria brassicicola.

Pedras MS, Minic Z.

Bioorg Med Chem. 2014 Jan 1;22(1):459-67. doi: 10.1016/j.bmc.2013.11.005. Epub 2013 Nov 13.

PMID:
24275350
23.

Nucleus tractus solitarii A(2a) adenosine receptors inhibit cardiopulmonary chemoreflex control of sympathetic outputs.

Minic Z, O'Leary DS, Scislo TJ.

Auton Neurosci. 2014 Feb;180:32-42. doi: 10.1016/j.autneu.2013.10.005. Epub 2013 Oct 25.

24.

Activation of NTS A(1) adenosine receptors inhibits regional sympathetic responses evoked by activation of cardiopulmonary chemoreflex.

Ichinose TK, Minic Z, Li C, O'Leary DS, Scislo TJ.

Am J Physiol Regul Integr Comp Physiol. 2012 Sep 1;303(5):R539-50. doi: 10.1152/ajpregu.00164.2012. Epub 2012 Jul 18.

25.

Discovery of inhibitors and substrates of brassinin hydrolase: Probing selectivity with dithiocarbamate bioisosteres.

Pedras MS, Minic Z, Hossain S.

Bioorg Med Chem. 2012 Jan 1;20(1):225-33. doi: 10.1016/j.bmc.2011.11.009. Epub 2011 Nov 12.

PMID:
22137599
26.

Differential protein expression in response to the phytoalexin brassinin allows the identification of molecular targets in the phytopathogenic fungus Alternaria brassicicola.

Pedras MS, Minic Z.

Mol Plant Pathol. 2012 Jun;13(5):483-93. doi: 10.1111/j.1364-3703.2011.00765.x. Epub 2011 Nov 24.

PMID:
22111639
27.

The biological deep sea hydrothermal vent as a model to study carbon dioxide capturing enzymes.

Minic Z, Thongbam PD.

Mar Drugs. 2011;9(5):719-38. doi: 10.3390/md9050719. Epub 2011 Apr 28. Review.

28.

Brassinin oxidase mediated transformation of the phytoalexin brassinin: structure of the elusive co-product, deuterium isotope effect and stereoselectivity.

Pedras MS, Minic Z, Sarma-Mamillapalle VK.

Bioorg Med Chem. 2011 Feb 15;19(4):1390-9. doi: 10.1016/j.bmc.2011.01.011. Epub 2011 Jan 13.

PMID:
21292494
29.

Indolyl-3-acetaldoxime dehydratase from the phytopathogenic fungus Sclerotinia sclerotiorum: purification, characterization, and substrate specificity.

Pedras MS, Minic Z, Thongbam PD, Bhaskar V, Montaut S.

Phytochemistry. 2010 Dec;71(17-18):1952-62. doi: 10.1016/j.phytochem.2010.10.002. Epub 2010 Oct 29.

PMID:
21036375
30.

Discovery of inhibitors of brassinin oxidase based on the scaffolds of the phytoalexins brassilexin and wasalexin.

Pedras MS, Minic Z, Sarma-Mamillapalle VK, Suchy M.

Bioorg Med Chem. 2010 Apr 1;18(7):2456-63. doi: 10.1016/j.bmc.2010.02.054. Epub 2010 Mar 2.

PMID:
20303277
31.

Substrate specificity and inhibition of brassinin hydrolases, detoxifying enzymes from the plant pathogens Leptosphaeria maculans and Alternaria brassicicola.

Pedras MS, Minic Z, Sarma-Mamillapalle VK.

FEBS J. 2009 Dec;276(24):7412-28. doi: 10.1111/j.1742-4658.2009.07457.x.

32.

Synthetic inhibitors of the fungal detoxifying enzyme brassinin oxidase based on the phytoalexin camalexin scaffold.

Pedras MS, Minic Z, Sarma-Mamillapalle VK.

J Agric Food Chem. 2009 Mar 25;57(6):2429-35. doi: 10.1021/jf803666s.

PMID:
19243099
33.

Transcriptomic analysis of Arabidopsis developing stems: a close-up on cell wall genes.

Minic Z, Jamet E, San-Clemente H, Pelletier S, Renou JP, Rihouey C, Okinyo DP, Proux C, Lerouge P, Jouanin L.

BMC Plant Biol. 2009 Jan 16;9:6. doi: 10.1186/1471-2229-9-6.

34.

Cloning, purification and characterisation of brassinin glucosyltransferase, a phytoalexin-detoxifying enzyme from the plant pathogen Sclerotinia sclerotiorum.

Sexton AC, Minic Z, Cozijnsen AJ, Pedras MS, Howlett BJ.

Fungal Genet Biol. 2009 Feb;46(2):201-9. doi: 10.1016/j.fgb.2008.10.014. Epub 2008 Nov 13.

PMID:
19041410
35.

Purification, cloning and functional characterization of an endogenous beta-glucuronidase in Arabidopsis thaliana.

Eudes A, Mouille G, Thévenin J, Goyallon A, Minic Z, Jouanin L.

Plant Cell Physiol. 2008 Sep;49(9):1331-41. doi: 10.1093/pcp/pcn108. Epub 2008 Jul 30.

PMID:
18667448
36.

Brassinin oxidase, a fungal detoxifying enzyme to overcome a plant defense -- purification, characterization and inhibition.

Pedras MS, Minic Z, Jha M.

FEBS J. 2008 Jul;275(14):3691-705. doi: 10.1111/j.1742-4658.2008.06513.x.

37.

Cell wall modifications in Arabidopsis plants with altered alpha-L-arabinofuranosidase activity.

Chávez Montes RA, Ranocha P, Martinez Y, Minic Z, Jouanin L, Marquis M, Saulnier L, Fulton LM, Cobbett CS, Bitton F, Renou JP, Jauneau A, Goffner D.

Plant Physiol. 2008 May;147(1):63-77. doi: 10.1104/pp.107.110023. Epub 2008 Mar 14.

38.

Physiological roles of plant glycoside hydrolases.

Minic Z.

Planta. 2008 Mar;227(4):723-40. Epub 2007 Nov 29. Review.

PMID:
18046575
39.

Isosteric probes provide structural requirements essential for detoxification of the phytoalexin brassinin by the fungal pathogen Leptosphaeria maculans.

Pedras MS, Jha M, Minic Z, Okeola OG.

Bioorg Med Chem. 2007 Sep 15;15(18):6054-61. Epub 2007 Jun 26.

PMID:
17616463
40.

A sub-proteome of Arabidopsis thaliana mature stems trapped on Concanavalin A is enriched in cell wall glycoside hydrolases.

Minic Z, Jamet E, Négroni L, Arsene der Garabedian P, Zivy M, Jouanin L.

J Exp Bot. 2007;58(10):2503-12. Epub 2007 May 26.

41.

Plant glycoside hydrolases involved in cell wall polysaccharide degradation.

Minic Z, Jouanin L.

Plant Physiol Biochem. 2006 Jul-Sep;44(7-9):435-49. Epub 2006 Sep 7. Review.

PMID:
17023165
42.

Control of EpsE, the phosphoglycosyltransferase initiating exopolysaccharide synthesis in Streptococcus thermophilus, by EpsD tyrosine kinase.

Minic Z, Marie C, Delorme C, Faurie JM, Mercier G, Ehrlich D, Renault P.

J Bacteriol. 2007 Feb;189(4):1351-7. Epub 2006 Sep 15.

43.

Purification, functional characterization, cloning, and identification of mutants of a seed-specific arabinan hydrolase in Arabidopsis.

Minic Z, Do CT, Rihouey C, Morin H, Lerouge P, Jouanin L.

J Exp Bot. 2006;57(10):2339-51. Epub 2006 Jun 23.

PMID:
16798843
44.

[Adaptation of organisms to extreme conditions of deep-sea hydrothermal vents].

Minic Z, Serre V, Hervé G.

C R Biol. 2006 Jul;329(7):527-40. Epub 2006 Mar 29. French.

PMID:
16797459
46.

Purification and characterization of enzymes exhibiting beta-D-xylosidase activities in stem tissues of Arabidopsis.

Minic Z, Rihouey C, Do CT, Lerouge P, Jouanin L.

Plant Physiol. 2004 Jun;135(2):867-78. Epub 2004 Jun 4.

47.

Arginine metabolism in the deep sea tube worm Riftia pachyptila and its bacterial endosymbiont.

Minic Z, Herve G.

J Biol Chem. 2003 Oct 17;278(42):40527-33. Epub 2003 Jul 24.

48.

AtBXL1, a novel higher plant (Arabidopsis thaliana) putative beta-xylosidase gene, is involved in secondary cell wall metabolism and plant development.

Goujon T, Minic Z, El Amrani A, Lerouxel O, Aletti E, Lapierre C, Joseleau JP, Jouanin L.

Plant J. 2003 Feb;33(4):677-90. Erratum in: Plant J. 2003 May;34(3):393.

49.

Catabolism of pyrimidine nucleotides in the deep-sea tube worm Riftia pachyptila.

Minic Z, Pastra-Landis S, Gaill F, Hervé G.

J Biol Chem. 2002 Jan 4;277(1):127-34. Epub 2001 Oct 8.

50.

Contribution of the bacterial endosymbiont to the biosynthesis of pyrimidine nucleotides in the deep-sea tube worm Riftia pachyptila.

Minic Z, Simon V, Penverne B, Gaill F, Hervé G.

J Biol Chem. 2001 Jun 29;276(26):23777-84. Epub 2001 Apr 16.

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