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Items: 1 to 50 of 150

1.

Vacuum-UV and Low-Energy Electron Induced DNA Strand Breaks - Influence of the DNA Sequence and Substrate.

Vogel S, Ebel K, Schürmann RM, Heck C, Meiling T, Milosavljevic AR, Giuliani A, Bald I.

Chemphyschem. 2019 Feb 4. doi: 10.1002/cphc.201801152. [Epub ahead of print]

PMID:
30719805
2.

Untargeted metabolomic profiling reveals multiple pathway perturbations and new clinical biomarkers in urea cycle disorders.

Burrage LC, Thistlethwaite L, Stroup BM, Sun Q, Miller MJ, Nagamani SCS, Craigen W, Scaglia F, Sutton VR, Graham B, Kennedy AD; Members of the UCDC,, Milosavljevic A, Lee BH, Elsea SH.

Genet Med. 2019 Jan 23. doi: 10.1038/s41436-019-0442-0. [Epub ahead of print]

PMID:
30670878
3.

Histoepigenetic analysis of HPV- and tobacco-associated head and neck cancer identifies both subtype-specific and common therapeutic targets despite divergent microenvironments.

Carrero I, Liu HC, Sikora AG, Milosavljevic A.

Oncogene. 2019 Jan 17. doi: 10.1038/s41388-018-0659-4. [Epub ahead of print]

PMID:
30655605
4.

Vacuum-UV induced DNA strand breaks - influence of the radiosensitizers 5-bromouracil and 8-bromoadenine.

Vogel S, Ebel K, Heck C, Schürmann RM, Milosavljević AR, Giuliani A, Bald I.

Phys Chem Chem Phys. 2019 Jan 23;21(4):1972-1979. doi: 10.1039/c8cp06813e.

PMID:
30633275
5.

Tricuspid valve avulsion 3 years after blunt chest trauma.

Jonjev ŽS, Milosavljević AM, Bjeljac I, Todić M, Koruga S.

J Card Surg. 2018 Dec;33(12):787-788. doi: 10.1111/jocs.13939. Epub 2018 Dec 11. No abstract available.

PMID:
30537193
6.

Photoionization of the iodine 3d, 4s, and 4p orbitals in methyl iodide.

Forbes R, De Fanis A, Bomme C, Rolles D, Pratt ST, Powis I, Besley NA, Simon M, Nandi S, Milosavljević AR, Nicolas C, Bozek JD, Underwood JG, Holland DMP.

J Chem Phys. 2018 Oct 14;149(14):144302. doi: 10.1063/1.5035496.

PMID:
30316287
7.

Evidence-based assessments of clinical actionability in the context of secondary findings: Updates from ClinGen's Actionability Working Group.

Webber EM, Hunter JE, Biesecker LG, Buchanan AH, Clarke EV, Currey E, Dagan-Rosenfeld O, Lee K, Lindor NM, Martin CL, Milosavljevic A, Mittendorf KF, Muessig KR, O'Daniel JM, Patel RY, Ramos EM, Rego S, Slavotinek AM, Sobriera NLM, Weaver MA, Williams MS, Evans JP, Goddard KAB; ClinGen Resource.

Hum Mutat. 2018 Nov;39(11):1677-1685. doi: 10.1002/humu.23631.

PMID:
30311382
8.

ClinGen advancing genomic data-sharing standards as a GA4GH driver project.

Dolman L, Page A, Babb L, Freimuth RR, Arachchi H, Bizon C, Brush M, Fiume M, Haendel M, Hansen DP, Milosavljevic A, Patel RY, Pawliczek P, Yates AD, Rehm HL.

Hum Mutat. 2018 Nov;39(11):1686-1689. doi: 10.1002/humu.23625.

PMID:
30311379
9.

ClinGen Allele Registry links information about genetic variants.

Pawliczek P, Patel RY, Ashmore LR, Jackson AR, Bizon C, Nelson T, Powell B, Freimuth RR, Strande N, Shah N, Paithankar S, Wright MW, Dwight S, Zhen J, Landrum M, McGarvey P, Babb L, Plon SE, Milosavljevic A; Clinical Genome (ClinGen) Resource.

Hum Mutat. 2018 Nov;39(11):1690-1701. doi: 10.1002/humu.23637.

PMID:
30311374
10.

Auger electron angular distributions following excitation or ionization of the I 3d level in methyl iodide.

Forbes R, De Fanis A, Bomme C, Rolles D, Pratt ST, Powis I, Besley NA, Nandi S, Milosavljević AR, Nicolas C, Bozek JD, Underwood JG, Holland DMP.

J Chem Phys. 2018 Sep 7;149(9):094304. doi: 10.1063/1.5045640.

PMID:
30195315
11.

Dynamic right ventricular outflow tract obstruction caused by a large interventricular membranous septal aneurysm.

Velicki L, Jakovljevic DG, Milosavljevic AM, Todic M, Rajic J, Fabri M.

Neth Heart J. 2018 Nov;26(11):575-576. doi: 10.1007/s12471-018-1150-0. No abstract available.

12.

Allele-specific epigenome maps reveal sequence-dependent stochastic switching at regulatory loci.

Onuchic V, Lurie E, Carrero I, Pawliczek P, Patel RY, Rozowsky J, Galeev T, Huang Z, Altshuler RC, Zhang Z, Harris RA, Coarfa C, Ashmore L, Bertol JW, Fakhouri WD, Yu F, Kellis M, Gerstein M, Milosavljevic A.

Science. 2018 Sep 28;361(6409). pii: eaar3146. doi: 10.1126/science.aar3146. Epub 2018 Aug 23.

13.

Community pharmacist-led interventions and their impact on patients' medication adherence and other health outcomes: a systematic review.

Milosavljevic A, Aspden T, Harrison J.

Int J Pharm Pract. 2018 Oct;26(5):387-397. doi: 10.1111/ijpp.12462. Epub 2018 Jun 21.

PMID:
29927005
14.

Electronic Properties of Free-Standing Surfactant-Capped Lead Halide Perovskite Nanocrystals Isolated in Vacuo.

Milosavljević AR, Božanić DK, Sadhu S, Vukmirović N, Dojčilović R, Sapkota P, Huang W, Bozek J, Nicolas C, Nahon L, Ptasinska S.

J Phys Chem Lett. 2018 Jul 5;9(13):3604-3611. doi: 10.1021/acs.jpclett.8b01466. Epub 2018 Jun 18.

PMID:
29902010
15.

Melatonin levels in human diabetic dental pulp tissue and its effects on dental pulp cells under hyperglycaemic conditions.

Milosavljević A, DJukić L, Toljić B, Milašin J, DŽeletović B, Brković B, Roganović J.

Int Endod J. 2018 Oct;51(10):1149-1158. doi: 10.1111/iej.12934. Epub 2018 Apr 21.

PMID:
29617040
16.

MicroRNA-146a and microRNA-155 as novel crevicular fluid biomarkers for periodontitis in non-diabetic and type 2 diabetic patients.

Radović N, Nikolić Jakoba N, Petrović N, Milosavljević A, Brković B, Roganović J.

J Clin Periodontol. 2018 Jun;45(6):663-671. doi: 10.1111/jcpe.12888. Epub 2018 May 15.

PMID:
29517812
17.

A questionnaire-based study evaluating differences between dental students in Paris (F) and Malmö (SE) regarding diagnosis and treatment decisions of patients with different severity levels of periodontal diseases.

Milosavljevic A, Stavropoulos A, Descroix V, Götrick B.

Eur J Dent Educ. 2018 Aug;22(3):e392-e399. doi: 10.1111/eje.12317. Epub 2018 Jan 8.

PMID:
29316064
18.

Characterization of Neutral Radicals from a Dissociative Electron Attachment Process.

Li Z, Milosavljević AR, Carmichael I, Ptasinska S.

Phys Rev Lett. 2017 Aug 4;119(5):053402. doi: 10.1103/PhysRevLett.119.053402. Epub 2017 Aug 1.

PMID:
28949760
19.

Multiple electron capture from isolated protein poly-anions in collision with slow highly charged ions.

Milosavljević AR, Rousseau P, Domaracka A, Huber BA, Giuliani A.

Phys Chem Chem Phys. 2017 Aug 2;19(30):19691-19698. doi: 10.1039/c7cp02075a.

PMID:
28524199
20.

ClinGen Pathogenicity Calculator: a configurable system for assessing pathogenicity of genetic variants.

Patel RY, Shah N, Jackson AR, Ghosh R, Pawliczek P, Paithankar S, Baker A, Riehle K, Chen H, Milosavljevic S, Bizon C, Rynearson S, Nelson T, Jarvik GP, Rehm HL, Harrison SM, Azzariti D, Powell B, Babb L, Plon SE, Milosavljevic A; ClinGen Resource.

Genome Med. 2017 Jan 12;9(1):3. doi: 10.1186/s13073-016-0391-z.

21.

Epigenomic Deconvolution of Breast Tumors Reveals Metabolic Coupling between Constituent Cell Types.

Onuchic V, Hartmaier RJ, Boone DN, Samuels ML, Patel RY, White WM, Garovic VD, Oesterreich S, Roth ME, Lee AV, Milosavljevic A.

Cell Rep. 2016 Nov 15;17(8):2075-2086. doi: 10.1016/j.celrep.2016.10.057.

22.

Integrating Genomic Resources with Electronic Health Records using the HL7 Infobutton Standard.

Heale BS, Overby CL, Del Fiol G, Rubinstein WS, Maglott DR, Nelson TH, Milosavljevic A, Martin CL, Goehringer SR, Freimuth R, Williams MS.

Appl Clin Inform. 2016 Aug 31;7(3):817-31. doi: 10.4338/ACI-2016-04-RA-0058.

23.

Sensitizing DNA Towards Low-Energy Electrons with 2-Fluoroadenine.

Rackwitz J, Kopyra J, Dąbkowska I, Ebel K, Ranković MLj, Milosavljević AR, Bald I.

Angew Chem Int Ed Engl. 2016 Aug 22;55(35):10248-52. doi: 10.1002/anie.201603464. Epub 2016 Aug 2.

PMID:
27481662
24.

Performance of ACMG-AMP Variant-Interpretation Guidelines among Nine Laboratories in the Clinical Sequencing Exploratory Research Consortium.

Amendola LM, Jarvik GP, Leo MC, McLaughlin HM, Akkari Y, Amaral MD, Berg JS, Biswas S, Bowling KM, Conlin LK, Cooper GM, Dorschner MO, Dulik MC, Ghazani AA, Ghosh R, Green RC, Hart R, Horton C, Johnston JJ, Lebo MS, Milosavljevic A, Ou J, Pak CM, Patel RY, Punj S, Richards CS, Salama J, Strande NT, Yang Y, Plon SE, Biesecker LG, Rehm HL.

Am J Hum Genet. 2016 Jul 7;99(1):247. doi: 10.1016/j.ajhg.2016.06.001. No abstract available.

25.

Low-Energy Electron-Induced Transformations in Organolead Halide Perovskite.

Milosavljević AR, Huang W, Sadhu S, Ptasinska S.

Angew Chem Int Ed Engl. 2016 Aug 16;55(34):10083-7. doi: 10.1002/anie.201605013. Epub 2016 Jun 29.

PMID:
27355420
26.

Assessment of Prognosis and Periodontal Treatment Goals Among General Dental Practitioners and Dental Hygienists.

Milosavljevic A, Götrick B, Hallström H, Stavropoulos A, Knutsson K.

Oral Health Prev Dent. 2016;14(5):433-441. doi: 10.3290/j.ohpd.a36472.

PMID:
27351737
27.

Performance of ACMG-AMP Variant-Interpretation Guidelines among Nine Laboratories in the Clinical Sequencing Exploratory Research Consortium.

Amendola LM, Jarvik GP, Leo MC, McLaughlin HM, Akkari Y, Amaral MD, Berg JS, Biswas S, Bowling KM, Conlin LK, Cooper GM, Dorschner MO, Dulik MC, Ghazani AA, Ghosh R, Green RC, Hart R, Horton C, Johnston JJ, Lebo MS, Milosavljevic A, Ou J, Pak CM, Patel RY, Punj S, Richards CS, Salama J, Strande NT, Yang Y, Plon SE, Biesecker LG, Rehm HL.

Am J Hum Genet. 2016 Jun 2;98(6):1067-1076. doi: 10.1016/j.ajhg.2016.03.024. Epub 2016 May 12. Erratum in: Am J Hum Genet. 2016 Jul 7;99(1):247.

28.

Extending gene ontology in the context of extracellular RNA and vesicle communication.

Cheung KH, Keerthikumar S, Roncaglia P, Subramanian SL, Roth ME, Samuel M, Anand S, Gangoda L, Gould S, Alexander R, Galas D, Gerstein MB, Hill AF, Kitchen RR, Lötvall J, Patel T, Procaccini DC, Quesenberry P, Rozowsky J, Raffai RL, Shypitsyna A, Su AI, Théry C, Vickers K, Wauben MH, Mathivanan S, Milosavljevic A, Laurent LC.

J Biomed Semantics. 2016 Apr 12;7:19. doi: 10.1186/s13326-016-0061-5. eCollection 2016.

29.

A fluorescent nanoprobe for single bacterium tracking: functionalization of silver nanoparticles with tryptophan to probe the nanoparticle accumulation with single cell resolution.

Dojčilović R, Pajović JD, Božanić DK, Vodnik VV, Dimitrijević-Branković S, Milosavljević AR, Kaščàkovà S, Réfrégiers M, Djoković V.

Analyst. 2016 Mar 21;141(6):1988-96. doi: 10.1039/c5an02358k.

PMID:
26858997
30.

VUV action spectroscopy of protonated leucine-enkephalin peptide in the 6-14 eV range.

Ranković MLj, Canon F, Nahon L, Giuliani A, Milosavljević AR.

J Chem Phys. 2015 Dec 28;143(24):244311. doi: 10.1063/1.4939080.

PMID:
26723675
32.

Using DNA origami nanostructures to determine absolute cross sections for UV photon-induced DNA strand breakage.

Vogel S, Rackwitz J, Schürman R, Prinz J, Milosavljević AR, Réfrégiers M, Giuliani A, Bald I.

J Phys Chem Lett. 2015 Nov 19;6(22):4589-93. doi: 10.1021/acs.jpclett.5b02238. Epub 2015 Nov 6.

PMID:
26536162
33.

Providing Access to Genomic Variant Knowledge in a Healthcare Setting: A Vision for the ClinGen Electronic Health Records Workgroup.

Overby CL, Heale B, Aronson S, Cherry JM, Dwight S, Milosavljevic A, Nelson T, Niehaus A, Weaver MA, Ramos EM, Williams MS.

Clin Pharmacol Ther. 2016 Feb;99(2):157-60. doi: 10.1002/cpt.270. Epub 2015 Nov 9.

34.

Tryptophan-functionalized gold nanoparticles for deep UV imaging of microbial cells.

Pajović JD, Dojčilović R, Božanić DK, Kaščáková S, Réfrégiers M, Dimitrijević-Branković S, Vodnik VV, Milosavljević AR, Piscopiello E, Luyt AS, Djoković V.

Colloids Surf B Biointerfaces. 2015 Nov 1;135:742-50. doi: 10.1016/j.colsurfb.2015.08.050. Epub 2015 Aug 28.

PMID:
26340364
35.

Integration of extracellular RNA profiling data using metadata, biomedical ontologies and Linked Data technologies.

Subramanian SL, Kitchen RR, Alexander R, Carter BS, Cheung KH, Laurent LC, Pico A, Roberts LR, Roth ME, Rozowsky JS, Su AI, Gerstein MB, Milosavljevic A.

J Extracell Vesicles. 2015 Aug 28;4:27497. doi: 10.3402/jev.v4.27497. eCollection 2015.

36.

Recurrent BCAM-AKT2 fusion gene leads to a constitutively activated AKT2 fusion kinase in high-grade serous ovarian carcinoma.

Kannan K, Coarfa C, Chao PW, Luo L, Wang Y, Brinegar AE, Hawkins SM, Milosavljevic A, Matzuk MM, Yen L.

Proc Natl Acad Sci U S A. 2015 Mar 17;112(11):E1272-7. doi: 10.1073/pnas.1501735112. Epub 2015 Mar 2.

37.

Integrative analysis of 111 reference human epigenomes.

Roadmap Epigenomics Consortium, Kundaje A, Meuleman W, Ernst J, Bilenky M, Yen A, Heravi-Moussavi A, Kheradpour P, Zhang Z, Wang J, Ziller MJ, Amin V, Whitaker JW, Schultz MD, Ward LD, Sarkar A, Quon G, Sandstrom RS, Eaton ML, Wu YC, Pfenning AR, Wang X, Claussnitzer M, Liu Y, Coarfa C, Harris RA, Shoresh N, Epstein CB, Gjoneska E, Leung D, Xie W, Hawkins RD, Lister R, Hong C, Gascard P, Mungall AJ, Moore R, Chuah E, Tam A, Canfield TK, Hansen RS, Kaul R, Sabo PJ, Bansal MS, Carles A, Dixon JR, Farh KH, Feizi S, Karlic R, Kim AR, Kulkarni A, Li D, Lowdon R, Elliott G, Mercer TR, Neph SJ, Onuchic V, Polak P, Rajagopal N, Ray P, Sallari RC, Siebenthall KT, Sinnott-Armstrong NA, Stevens M, Thurman RE, Wu J, Zhang B, Zhou X, Beaudet AE, Boyer LA, De Jager PL, Farnham PJ, Fisher SJ, Haussler D, Jones SJ, Li W, Marra MA, McManus MT, Sunyaev S, Thomson JA, Tlsty TD, Tsai LH, Wang W, Waterland RA, Zhang MQ, Chadwick LH, Bernstein BE, Costello JF, Ecker JR, Hirst M, Meissner A, Milosavljevic A, Ren B, Stamatoyannopoulos JA, Wang T, Kellis M.

Nature. 2015 Feb 19;518(7539):317-30. doi: 10.1038/nature14248.

38.

Epigenomic footprints across 111 reference epigenomes reveal tissue-specific epigenetic regulation of lincRNAs.

Amin V, Harris RA, Onuchic V, Jackson AR, Charnecki T, Paithankar S, Lakshmi Subramanian S, Riehle K, Coarfa C, Milosavljevic A.

Nat Commun. 2015 Feb 18;6:6370. doi: 10.1038/ncomms7370.

39.

Intermediate DNA methylation is a conserved signature of genome regulation.

Elliott G, Hong C, Xing X, Zhou X, Li D, Coarfa C, Bell RJ, Maire CL, Ligon KL, Sigaroudinia M, Gascard P, Tlsty TD, Harris RA, Schalkwyk LC, Bilenky M, Mill J, Farnham PJ, Kellis M, Marra MA, Milosavljevic A, Hirst M, Stormo GD, Wang T, Costello JF.

Nat Commun. 2015 Feb 18;6:6363. doi: 10.1038/ncomms7363.

40.

Action spectroscopy of a protonated peptide in the ultraviolet range.

Canon F, Milosavljević AR, Nahon L, Giuliani A.

Phys Chem Chem Phys. 2015 Oct 21;17(39):25725-33. doi: 10.1039/c4cp04762a.

PMID:
25586594
41.

Analysis of interactions between the epigenome and structural mutability of the genome using Genboree Workbench tools.

Coarfa C, Pichot C, Jackson A, Tandon A, Amin V, Raghuraman S, Paithankar S, Lee AV, McGuire SE, Milosavljevic A.

BMC Bioinformatics. 2014;15 Suppl 7:S2. doi: 10.1186/1471-2105-15-S7-S2. Epub 2014 May 28.

42.

First Report of Cercospora apii, Causal Agent of Cercospora Early Blight of Celery, in Serbia.

Milosavljević A, Pfaf-Dolovac E, Mitrović M, Jović J, Toševski I, Duduk N, Trkulja N.

Plant Dis. 2014 Aug;98(8):1157. doi: 10.1094/PDIS-02-14-0135-PDN.

PMID:
30708813
43.

First Report of Cercospora carotae, Causal Agent of Cercospora Leaf Spot of Carrot, in Serbia.

Milosavljević A, Pfaf-Dolovac E, Mitrović M, Jović J, Toševski I, Duduk N, Trkulja N.

Plant Dis. 2014 Aug;98(8):1153. doi: 10.1094/PDIS-08-13-0858-PDN.

PMID:
30708812
44.

Energy-Dependent UV Photodissociation of Gas-Phase Adenosine Monophosphate Nucleotide Ions: The Role of a Single Solvent Molecule.

Milosavljević AR, Cerovski VZ, Canon F, Ranković MLj, Škoro N, Nahon L, Giuliani A.

J Phys Chem Lett. 2014 Jun 5;5(11):1994-9. doi: 10.1021/jz500696b. Epub 2014 May 23.

PMID:
26273885
45.

mtDNA haplogroup and single nucleotide polymorphisms structure human microbiome communities.

Ma J, Coarfa C, Qin X, Bonnen PE, Milosavljevic A, Versalovic J, Aagaard K.

BMC Genomics. 2014 Apr 3;15:257. doi: 10.1186/1471-2164-15-257.

46.

CDKN2D-WDFY2 is a cancer-specific fusion gene recurrent in high-grade serous ovarian carcinoma.

Kannan K, Coarfa C, Rajapakshe K, Hawkins SM, Matzuk MM, Milosavljevic A, Yen L.

PLoS Genet. 2014 Mar 27;10(3):e1004216. doi: 10.1371/journal.pgen.1004216. eCollection 2014 Mar.

47.

Comparison and quantitative verification of mapping algorithms for whole-genome bisulfite sequencing.

Kunde-Ramamoorthy G, Coarfa C, Laritsky E, Kessler NJ, Harris RA, Xu M, Chen R, Shen L, Milosavljevic A, Waterland RA.

Nucleic Acids Res. 2014 Apr;42(6):e43. doi: 10.1093/nar/gkt1325. Epub 2014 Jan 3.

48.

Contribution of synchrotron radiation to photoactivation studies of biomolecular ions in the gas phase.

Giuliani A, Milosavljević AR, Canon F, Nahon L.

Mass Spectrom Rev. 2014 Nov-Dec;33(6):424-41. doi: 10.1002/mas.21398. Epub 2013 Dec 17. Review.

PMID:
24375654
49.

Recommendations for the design and analysis of epigenome-wide association studies.

Michels KB, Binder AM, Dedeurwaerder S, Epstein CB, Greally JM, Gut I, Houseman EA, Izzi B, Kelsey KT, Meissner A, Milosavljevic A, Siegmund KD, Bock C, Irizarry RA.

Nat Methods. 2013 Oct;10(10):949-55. doi: 10.1038/nmeth.2632. Review.

PMID:
24076989
50.

Different treatment strategies are applied to patients with the same periodontal status in general dentistry.

Milosavljevic A, Götrick B, Hallström H, Jansson H, Knutsson K.

Acta Odontol Scand. 2014 May;72(4):290-7. doi: 10.3109/00016357.2013.824605. Epub 2013 Sep 23.

PMID:
24053366

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