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Items: 23


Myofibroblast proliferation and heterogeneity are supported by macrophages during skin repair.

Shook BA, Wasko RR, Rivera-Gonzalez GC, Salazar-Gatzimas E, López-Giráldez F, Dash BC, Muñoz-Rojas AR, Aultman KD, Zwick RK, Lei V, Arbiser JL, Miller-Jensen K, Clark DA, Hsia HC, Horsley V.

Science. 2018 Nov 23;362(6417). pii: eaar2971. doi: 10.1126/science.aar2971.


Advancing systems immunology through data-driven statistical analysis.

Fong LE, Muñoz-Rojas AR, Miller-Jensen K.

Curr Opin Biotechnol. 2018 Aug;52:109-115. doi: 10.1016/j.copbio.2018.03.009. Epub 2018 Apr 12. Review.


Myeloid-targeted immunotherapies act in synergy to induce inflammation and antitumor immunity.

Perry CJ, Muñoz-Rojas AR, Meeth KM, Kellman LN, Amezquita RA, Thakral D, Du VY, Wang JX, Damsky W, Kuhlmann AL, Sher JW, Bosenberg M, Miller-Jensen K, Kaech SM.

J Exp Med. 2018 Mar 5;215(3):877-893. doi: 10.1084/jem.20171435. Epub 2018 Feb 7.


NF-κB-Chromatin Interactions Drive Diverse Phenotypes by Modulating Transcriptional Noise.

Wong VC, Bass VL, Bullock ME, Chavali AK, Lee REC, Mothes W, Gaudet S, Miller-Jensen K.

Cell Rep. 2018 Jan 16;22(3):585-599. doi: 10.1016/j.celrep.2017.12.080.


Systems analysis of latent HIV reversal reveals altered stress kinase signaling and increased cell death in infected T cells.

Fong LE, Sulistijo ES, Miller-Jensen K.

Sci Rep. 2017 Nov 23;7(1):16179. doi: 10.1038/s41598-017-15532-0.


Tumor Necrosis Factor-α and IL-17A Activation Induces Pericyte-Mediated Basement Membrane Remodeling in Human Neutrophilic Dermatoses.

Lauridsen HM, Pellowe AS, Ramanathan A, Liu R, Miller-Jensen K, McNiff JM, Pober JS, Gonzalez AL.

Am J Pathol. 2017 Aug;187(8):1893-1906. doi: 10.1016/j.ajpath.2017.04.008. Epub 2017 Jun 10.


Distinct Signaling Thresholds Distinguish Friend from Foe.

Miller-Jensen K.

Cell Syst. 2016 Jun 22;2(6):360-1. doi: 10.1016/j.cels.2016.06.003.


Redefining Signaling Pathways with an Expanding Single-Cell Toolbox.

Gaudet S, Miller-Jensen K.

Trends Biotechnol. 2016 Jun;34(6):458-469. doi: 10.1016/j.tibtech.2016.02.009. Epub 2016 Mar 9. Review.


Generalized selection to overcome innate immunity selects for host breadth in an RNA virus.

Wasik BR, Muñoz-Rojas AR, Okamoto KW, Miller-Jensen K, Turner PE.

Evolution. 2016 Feb;70(2):270-81. doi: 10.1111/evo.12845. Epub 2016 Jan 20.


Distinct promoter activation mechanisms modulate noise-driven HIV gene expression.

Chavali AK, Wong VC, Miller-Jensen K.

Sci Rep. 2015 Dec 15;5:17661. doi: 10.1038/srep17661.


Quantitative evaluation and optimization of co-drugging to improve anti-HIV latency therapy.

Wong VC, Fong LE, Adams NM, Xue Q, Dey SS, Miller-Jensen K.

Cell Mol Bioeng. 2014 Sep 1;7(3):320-333.


A passive-flow microfluidic device for imaging latent HIV activation dynamics in single T cells.

Ramji R, Wong VC, Chavali AK, Gearhart LM, Miller-Jensen K.

Integr Biol (Camb). 2015 Sep;7(9):998-1010. doi: 10.1039/c5ib00094g. Epub 2015 Jul 3.


Analysis of single-cell cytokine secretion reveals a role for paracrine signaling in coordinating macrophage responses to TLR4 stimulation.

Xue Q, Lu Y, Eisele MR, Sulistijo ES, Khan N, Fan R, Miller-Jensen K.

Sci Signal. 2015 Jun 16;8(381):ra59. doi: 10.1126/scisignal.aaa2155.


Highly multiplexed profiling of single-cell effector functions reveals deep functional heterogeneity in response to pathogenic ligands.

Lu Y, Xue Q, Eisele MR, Sulistijo ES, Brower K, Han L, Amir el-AD, Pe'er D, Miller-Jensen K, Fan R.

Proc Natl Acad Sci U S A. 2015 Feb 17;112(7):E607-15. doi: 10.1073/pnas.1416756112. Epub 2015 Feb 2.


"Pop-slide" patterning: Rapid fabrication of microstructured PDMS gasket slides for biological applications.

Ramji R, Khan NT, Muñoz-Rojas A, Miller-Jensen K.

RSC Adv. 2015;5(81):66294-66300. Epub 2015 Aug 4.


Genetic selection for context-dependent stochastic phenotypes: Sp1 and TATA mutations increase phenotypic noise in HIV-1 gene expression.

Miller-Jensen K, Skupsky R, Shah PS, Arkin AP, Schaffer DV.

PLoS Comput Biol. 2013;9(7):e1003135. doi: 10.1371/journal.pcbi.1003135. Epub 2013 Jul 11.


High-throughput secretomic analysis of single cells to assess functional cellular heterogeneity.

Lu Y, Chen JJ, Mu L, Xue Q, Wu Y, Wu PH, Li J, Vortmeyer AO, Miller-Jensen K, Wirtz D, Fan R.

Anal Chem. 2013 Feb 19;85(4):2548-56. doi: 10.1021/ac400082e. Epub 2013 Feb 1.


Chromatin accessibility at the HIV LTR promoter sets a threshold for NF-κB mediated viral gene expression.

Miller-Jensen K, Dey SS, Pham N, Foley JE, Arkin AP, Schaffer DV.

Integr Biol (Camb). 2012 Jun;4(6):661-71. doi: 10.1039/c2ib20009k. Epub 2012 May 3.


Systems biology of virus-host signaling network interactions.

Xue Q, Miller-Jensen K.

BMB Rep. 2012 Apr;45(4):213-20. Review.


Varying virulence: epigenetic control of expression noise and disease processes.

Miller-Jensen K, Dey SS, Schaffer DV, Arkin AP.

Trends Biotechnol. 2011 Oct;29(10):517-25. doi: 10.1016/j.tibtech.2011.05.004. Epub 2011 Jun 21. Review.


Control of stochastic gene expression by host factors at the HIV promoter.

Burnett JC, Miller-Jensen K, Shah PS, Arkin AP, Schaffer DV.

PLoS Pathog. 2009 Jan;5(1):e1000260. doi: 10.1371/journal.ppat.1000260. Epub 2009 Jan 9.


Common effector processing mediates cell-specific responses to stimuli.

Miller-Jensen K, Janes KA, Brugge JS, Lauffenburger DA.

Nature. 2007 Aug 2;448(7153):604-8. Epub 2007 Jul 18.


Adenoviral vector saturates Akt pro-survival signaling and blocks insulin-mediated rescue of tumor necrosis-factor-induced apoptosis.

Miller-Jensen K, Janes KA, Wong YL, Griffith LG, Lauffenburger DA.

J Cell Sci. 2006 Sep 15;119(Pt 18):3788-98. Epub 2006 Aug 29.

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