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Shotgun ion mobility mass spectrometry sequencing of heparan sulfate saccharides.

Miller RL, Guimond SE, Schwörer R, Zubkova OV, Tyler PC, Xu Y, Liu J, Chopra P, Boons GJ, Grabarics M, Manz C, Hofmann J, Karlsson NG, Turnbull JE, Struwe WB, Pagel K.

Nat Commun. 2020 Mar 20;11(1):1481. doi: 10.1038/s41467-020-15284-y.


Questions and controversies in the study of time-varying functional connectivity in resting fMRI.

Lurie DJ, Kessler D, Bassett DS, Betzel RF, Breakspear M, Kheilholz S, Kucyi A, Liégeois R, Lindquist MA, McIntosh AR, Poldrack RA, Shine JM, Thompson WH, Bielczyk NZ, Douw L, Kraft D, Miller RL, Muthuraman M, Pasquini L, Razi A, Vidaurre D, Xie H, Calhoun VD.

Netw Neurosci. 2020 Feb 1;4(1):30-69. doi: 10.1162/netn_a_00116. eCollection 2020. Review.


Bioextractive Removal of Nitrogen by Oysters in Great Bay Piscataqua River Estuary, New Hampshire, USA.

Bricker SB, Grizzle RE, Trowbridge P, Rose JM, Ferreira JG, Wellman K, Zhu C, Galimany E, Wikfors GH, Saurel C, Miller RL, Wands J, Rheault R, Steinberg J, Jacob AP, Davenport ED, Ayvazian S, Chintala M, Tedesco MA.

Estuaries Coast. 2020 Jan 1;43:23-38. doi: 10.1007/s12237-019-00661-8.


Gendered powerlessness in at-risk adolescent and young women: an empirical model.

Chiaramonte D, Miller RL, Lee K, Santiago Rivera OJ, Acevedo-Polakovich ID, McGirr S, Porter JL, Ellen JM, Boyer CB; Adolescent Medicine Trials Network for HIV/AIDS Interventions.

AIDS Care. 2020 Feb 2:1-10. doi: 10.1080/09540121.2020.1724252. [Epub ahead of print]


Completion norms for 3085 English sentence contexts.

Peelle JE, Miller RL, Rogers CS, Spehar B, Sommers MS, Van Engen KJ.

Behav Res Methods. 2020 Jan 28. doi: 10.3758/s13428-020-01351-1. [Epub ahead of print]


Longitudinal within-host evolution of HIV Nef-mediated CD4, HLA and SERINC5 downregulation activity: a case study.

Sudderuddin H, Kinloch NN, Jin SW, Miller RL, Jones BR, Brumme CJ, Joy JB, Brockman MA, Brumme ZL.

Retrovirology. 2020 Jan 9;17(1):3. doi: 10.1186/s12977-019-0510-1.


Indium-111 labelling of liposomal HEGF for radionuclide delivery via ultrasound-induced cavitation.

Owen J, Thomas E, Menon J, Gray M, Skaripa-Koukelli I, Gill MR, Wallington S, Miller RL, Vallis KA, Carlisle R.

J Control Release. 2020 Mar 10;319:222-233. doi: 10.1016/j.jconrel.2019.12.045. Epub 2019 Dec 28.


Whole brain polarity regime dynamics are significantly disrupted in schizophrenia and correlate strongly with network connectivity measures.

Miller RL, Pearlson G, Calhoun VD.

PLoS One. 2019 Dec 11;14(12):e0224744. doi: 10.1371/journal.pone.0224744. eCollection 2019.


Genetic Diversity, Compartmentalization, and Age of HIV Proviruses Persisting in CD4+ T Cell Subsets during Long-Term Combination Antiretroviral Therapy.

Jones BR, Miller RL, Kinloch NN, Tsai O, Rigsby H, Sudderuddin H, Shahid A, Ganase B, Brumme CJ, Harris M, Poon AFY, Brockman MA, Fromentin R, Chomont N, Joy JB, Brumme ZL.

J Virol. 2020 Feb 14;94(5). pii: e01786-19. doi: 10.1128/JVI.01786-19. Print 2020 Feb 14.


Improving Timely Linkage to Care among Newly Diagnosed HIV-Infected Youth: Results of SMILE.

Miller RL, Chiaramonte D, Strzyzykowski T, Sharma D, Anderson-Carpenter K, Fortenberry JD.

J Urban Health. 2019 Dec;96(6):845-855. doi: 10.1007/s11524-019-00391-z.


Identifying reproducible individual differences in childhood functional brain networks: An ABCD study.

Marek S, Tervo-Clemmens B, Nielsen AN, Wheelock MD, Miller RL, Laumann TO, Earl E, Foran WW, Cordova M, Doyle O, Perrone A, Miranda-Dominguez O, Feczko E, Sturgeon D, Graham A, Hermosillo R, Snider K, Galassi A, Nagel BJ, Ewing SWF, Eggebrecht AT, Garavan H, Dale AM, Greene DJ, Barch DM, Fair DA, Luna B, Dosenbach NUF.

Dev Cogn Neurosci. 2019 Dec;40:100706. doi: 10.1016/j.dcn.2019.100706. Epub 2019 Sep 19.


Dispositional mindfulness predicts cortisol, cardiovascular, and psychological stress responses in adolescence.

Lucas-Thompson RG, Miller RL, Seiter NS, Prince MA.

Psychoneuroendocrinology. 2019 Dec;110:104405. doi: 10.1016/j.psyneuen.2019.104405. Epub 2019 Aug 24.


Decisions for Long-Term Ventilation for Children. Perspectives of Family Members.

Edwards JD, Panitch HB, Nelson JE, Miller RL, Morris MC.

Ann Am Thorac Soc. 2020 Jan;17(1):72-80. doi: 10.1513/AnnalsATS.201903-271OC.


Environmental exposures during windows of susceptibility for breast cancer: a framework for prevention research.

Terry MB, Michels KB, Brody JG, Byrne C, Chen S, Jerry DJ, Malecki KMC, Martin MB, Miller RL, Neuhausen SL, Silk K, Trentham-Dietz A; Breast Cancer and the Environment Research Program (BCERP).

Breast Cancer Res. 2019 Aug 20;21(1):96. doi: 10.1186/s13058-019-1168-2. Review.


Prenatal exposure to airborne polycyclic aromatic hydrocarbons and childhood growth trajectories from age 5-14 years.

Rundle AG, Gallagher D, Herbstman JB, Goldsmith J, Holmes D, Hassoun A, Oberfield S, Miller RL, Andrews H, Widen EM, Hoepner LA, Perera F.

Environ Res. 2019 Oct;177:108595. doi: 10.1016/j.envres.2019.108595. Epub 2019 Jul 19.


Towards a standardized bioinformatics infrastructure for N- and O-glycomics.

Rojas-Macias MA, Mariethoz J, Andersson P, Jin C, Venkatakrishnan V, Aoki NP, Shinmachi D, Ashwood C, Madunic K, Zhang T, Miller RL, Horlacher O, Struwe WB, Watanabe Y, Okuda S, Levander F, Kolarich D, Rudd PM, Wuhrer M, Kettner C, Packer NH, Aoki-Kinoshita KF, Lisacek F, Karlsson NG.

Nat Commun. 2019 Jul 22;10(1):3275. doi: 10.1038/s41467-019-11131-x. Review.


Arginine methylation expands the regulatory mechanisms and extends the genomic landscape under E2F control.

Roworth AP, Carr SM, Liu G, Barczak W, Miller RL, Munro S, Kanapin A, Samsonova A, La Thangue NB.

Sci Adv. 2019 Jun 26;5(6):eaaw4640. doi: 10.1126/sciadv.aaw4640. eCollection 2019 Jun.


Advances in drug allergy, urticaria, angioedema, and anaphylaxis in 2018.

Miller RL, Shtessel M, Robinson LB, Banerji A.

J Allergy Clin Immunol. 2019 Aug;144(2):381-392. doi: 10.1016/j.jaci.2019.06.010. Epub 2019 Jun 24.


HIV Diversity and Genetic Compartmentalization in Blood and Testes during Suppressive Antiretroviral Therapy.

Miller RL, Ponte R, Jones BR, Kinloch NN, Omondi FH, Jenabian MA, Dupuy FP, Fromentin R, Brassard P, Mehraj V, Chomont N, Poon AFY, Joy JB, Brumme ZL, Routy JP; ORCHID Study Group.

J Virol. 2019 Aug 13;93(17). pii: e00755-19. doi: 10.1128/JVI.00755-19. Print 2019 Sep 1.


The moderating role of resilience resources in the association between crime exposure and substance use among young sexual minority men.

Gamarel KE, Nelson KM, Heinze J, Chiaramonte DM, Miller RL; Adolescent Medicine Trials Network for HIV/AIDS Interventions.

Subst Use Misuse. 2019;54(11):1787-1798. doi: 10.1080/10826084.2019.1610447. Epub 2019 May 16.


Associations of Timing and Mode of Commuting with In-Transit Black Carbon Exposure and Airway Inflammation: A Pilot Study.

Lovinsky-Desir S, Miller RL, Chillrud SN, Perzanowski MS, Jung KH.

Ann Am Thorac Soc. 2019 Jul;16(7):923-927. doi: 10.1513/AnnalsATS.201810-668RL. No abstract available.


Developing noninvasive methodologies to assess koala population health through detecting Chlamydia from scats.

Cristescu RH, Miller RL, Schultz AJ, Hulse L, Jaccoud D, Johnston S, Hanger J, Booth R, Frère CH.

Mol Ecol Resour. 2019 Jul;19(4):957-969. doi: 10.1111/1755-0998.12999. Epub 2019 May 5.


HIV Subtype and Nef-Mediated Immune Evasion Function Correlate with Viral Reservoir Size in Early-Treated Individuals.

Omondi FH, Chandrarathna S, Mujib S, Brumme CJ, Jin SW, Sudderuddin H, Miller RL, Rahimi A, Laeyendecker O, Bonner P, Yue FY, Benko E, Kovacs CM, Brockman MA, Ostrowski M, Brumme ZL.

J Virol. 2019 Mar 5;93(6). pii: e01832-18. doi: 10.1128/JVI.01832-18. Print 2019 Mar 15.


Dual HLA B*42 and B*81-reactive T cell receptors recognize more diverse HIV-1 Gag escape variants.

Ogunshola F, Anmole G, Miller RL, Goering E, Nkosi T, Muema D, Mann J, Ismail N, Chopera D, Ndung'u T, Brockman MA, Ndhlovu ZM.

Nat Commun. 2018 Nov 27;9(1):5023. doi: 10.1038/s41467-018-07209-7.


The importance of genetics and genetic counselors in the evaluation of patients with bicuspid aortic valve and aortopathy.

Miller RL, Diamonstein CJ, Benheim A.

Curr Opin Cardiol. 2019 Jan;34(1):73-78. doi: 10.1097/HCO.0000000000000586. Review.


Air pollution, urgent asthma medical visits and the modifying effect of neighborhood asthma prevalence.

Lovinsky-Desir S, Acosta LM, Rundle AG, Miller RL, Goldstein IF, Jacobson JS, Chillrud SN, Perzanowski MS.

Pediatr Res. 2019 Jan;85(1):36-42. doi: 10.1038/s41390-018-0189-3. Epub 2018 Oct 18.


Resting-State fMRI Dynamics and Null Models: Perspectives, Sampling Variability, and Simulations.

Miller RL, Abrol A, Adali T, Levin-Schwarz Y, Calhoun VD.

Front Neurosci. 2018 Sep 6;12:551. doi: 10.3389/fnins.2018.00551. eCollection 2018.


Predicting complications in hepatic resection for colorectal liver metastasis: the lymphocyte-to-monocyte ratio.

McCluney SJ, Giakoustidis AA, Segler A, Bissel J, Miller RL, Valente R, Hutchins RR, Abraham A, Bhattacharya S, Kocher HM.

ANZ J Surg. 2018 Nov;88(11):E782-E786. doi: 10.1111/ans.14725. Epub 2018 Jul 16.


Alternaria is associated with asthma symptoms and exhaled NO among NYC children.

Soffer N, Green BJ, Acosta L, Divjan A, Sobek E, Lemons AR, Rundle AG, Jacobson JS, Goldstein IF, Miller RL, Perzanowski MS.

J Allergy Clin Immunol. 2018 Oct;142(4):1366-1368.e10. doi: 10.1016/j.jaci.2018.04.043. Epub 2018 Jun 28. No abstract available.


Assessment of exposure to air pollution in children: Determining whether wearing a personal monitor affects physical activity.

Lovinsky-Desir S, Lawrence J, Jung KH, Rundle AG, Hoepner LA, Yan B, Perera F, Perzanowski MS, Miller RL, Chillrud SN.

Environ Res. 2018 Oct;166:340-343. doi: 10.1016/j.envres.2018.06.017. Epub 2018 Jun 15.


Reduced higher-dimensional resting state fMRI dynamism in clinical high-risk individuals for schizophrenia identified by meta-state analysis.

Mennigen E, Miller RL, Rashid B, Fryer SL, Loewy RL, Stuart BK, Mathalon DH, Calhoun VD.

Schizophr Res. 2018 Nov;201:217-223. doi: 10.1016/j.schres.2018.06.007. Epub 2018 Jun 12.


Randomized phase 2 trial of monthly vitamin D to prevent respiratory complications in children with sickle cell disease.

Lee MT, Kattan M, Fennoy I, Arpadi SM, Miller RL, Cremers S, McMahon DJ, Nieves JW, Brittenham GM.

Blood Adv. 2018 May 8;2(9):969-978. doi: 10.1182/bloodadvances.2017013979.


It's not just the food you eat: Environmental factors in the development of food allergies.

Yu JE, Mallapaty A, Miller RL.

Environ Res. 2018 Aug;165:118-124. doi: 10.1016/j.envres.2018.03.028. Epub 2018 Apr 22. Review.


Understanding Root Causes of Asthma. Perinatal Environmental Exposures and Epigenetic Regulation.

Miller RL, Lawrence J.

Ann Am Thorac Soc. 2018 Apr;15(Suppl 2):S103-S108. doi: 10.1513/AnnalsATS.201706-514MG. Review.


Youth health outcomes from the Connect-to-Protect Coalitions to prevent adolescent HIV infections.

Miller RL, Lee KS, Chiaramonte D, Santiago-Rivera OJ, Acevedo-Polakovich I, Boyer CB, Ellen JM; Adolescent Medicine Trials Network for HIV/AIDS Interventions (ATN).

Vulnerable Child Youth Stud. 2018;13(2):142-157. doi: 10.1080/17450128.2017.1371818. Epub 2017 Sep 4.


Optimization of mRNA untranslated regions for improved expression of therapeutic mRNA.

Asrani KH, Farelli JD, Stahley MR, Miller RL, Cheng CJ, Subramanian RR, Brown JM.

RNA Biol. 2018;15(6):756-762. doi: 10.1080/15476286.2018.1450054. Epub 2018 Mar 26.


Mycotic Pulmonary Artery Aneurysm Mimicking a Rasmussen Aneurysm.

Cajigas-Loyola SC, Miller RL, Spieler B, Carbonella G.

Ochsner J. 2018 Spring;18(1):104-107.


Infant rhinitis and watery eyes predict school-age exercise-induced wheeze, emergency department visits and respiratory-related hospitalizations.

Savary KW, Miller RL, Arteaga-Solis E, Hoepner L, Acosta LM, Perera FP, Rundle AG, Goldstein IF, Perzanowski MS.

Ann Allergy Asthma Immunol. 2018 Mar;120(3):278-284.e2. doi: 10.1016/j.anai.2017.11.024.


Aberrant functional network connectivity in psychopathy from a large (N = 985) forensic sample.

Espinoza FA, Vergara VM, Reyes D, Anderson NE, Harenski CL, Decety J, Rachakonda S, Damaraju E, Rashid B, Miller RL, Koenigs M, Kosson DS, Harenski K, Kiehl KA, Calhoun VD.

Hum Brain Mapp. 2018 Jun;39(6):2624-2634. doi: 10.1002/hbm.24028. Epub 2018 Mar 2.


Breast cancer family history and allele-specific DNA methylation in the legacy girls study.

Wu HC, Do C, Andrulis IL, John EM, Daly MB, Buys SS, Chung WK, Knight JA, Bradbury AR, Keegan THM, Schwartz L, Krupska I, Miller RL, Santella RM, Tycko B, Terry MB.

Epigenetics. 2018;13(3):240-250. doi: 10.1080/15592294.2018.1435243. Epub 2018 Apr 2.


Structural Effects on HIV Risk Among Youth: A Multi-level Analysis.

Miller RL, Strzyzykowski T, Lee KS, Chiaramonte D, Acevedo-Polakovich I, Spring H, Santiago-Rivera O, Boyer CB, Ellen JM.

AIDS Behav. 2018 Nov;22(11):3451-3467. doi: 10.1007/s10461-018-2031-7.


Exposure to NO2, CO, and PM2.5 is linked to regional DNA methylation differences in asthma.

Prunicki M, Stell L, Dinakarpandian D, de Planell-Saguer M, Lucas RW, Hammond SK, Balmes JR, Zhou X, Paglino T, Sabatti C, Miller RL, Nadeau KC.

Clin Epigenetics. 2018 Jan 5;10:2. doi: 10.1186/s13148-017-0433-4. eCollection 2018.


Whole-Brain Connectivity in a Large Study of Huntington's Disease Gene Mutation Carriers and Healthy Controls.

Espinoza FA, Turner JA, Vergara VM, Miller RL, Mennigen E, Liu J, Misiura MB, Ciarochi J, Johnson HJ, Long JD, Bockholt HJ, Magnotta VA, Paulsen JS, Calhoun VD.

Brain Connect. 2018 Apr;8(3):166-178. doi: 10.1089/brain.2017.0538. Epub 2018 Mar 8.


Ecological Barriers to HIV Service Access among Young Men who have Sex with Men and High-Risk Young Women from Low-resourced Urban Communities.

Chiaramonte D, Strzyzykowski T, Acevedo-Polakovich I, Miller RL, Boyer CB, Ellen JM.

J HIV AIDS Soc Serv. 2018;17(4):313-333. doi: 10.1080/15381501.2018.1502710. Epub 2018 Nov 13.


Synthesis and in vitro characterization of a P2X7 radioligand [123I]TZ6019 and its response to neuroinflammation in a mouse model of Alzheimer disease.

Jin H, Han J, Resing D, Liu H, Yue X, Miller RL, Schoch KM, Miller TM, Perlmutter JS, Egan TM, Tu Z.

Eur J Pharmacol. 2018 Feb 5;820:8-17. doi: 10.1016/j.ejphar.2017.12.006. Epub 2017 Dec 7.


Anticipated HIV Stigma and Delays in Regular HIV Testing Behaviors Among Sexually-Active Young Gay, Bisexual, and Other Men Who Have Sex with Men and Transgender Women.

Gamarel KE, Nelson KM, Stephenson R, Santiago Rivera OJ, Chiaramonte D, Miller RL; Adolescent Medicine Trials Network for HIV/AIDS Interventions.

AIDS Behav. 2018 Feb;22(2):522-530. doi: 10.1007/s10461-017-2005-1.


Survey of financial burden of families in the U.S. with children using home mechanical ventilation.

Edwards JD, Panitch HB, Constantinescu A, Miller RL, Stone PW.

Pediatr Pulmonol. 2018 Jan;53(1):108-116. doi: 10.1002/ppul.23917. Epub 2017 Nov 20.


Detection of relationships among multi-modal brain imaging meta-features via information flow.

Miller RL, Vergara VM, Calhoun VD.

J Neurosci Methods. 2018 Jan 15;294:72-80. doi: 10.1016/j.jneumeth.2017.11.006. Epub 2017 Nov 14.


Mediodorsal Thalamic Neurons Mirror the Activity of Medial Prefrontal Neurons Responding to Movement and Reinforcement during a Dynamic DNMTP Task.

Miller RLA, Francoeur MJ, Gibson BM, Mair RG.

eNeuro. 2017 Oct 13;4(5). pii: ENEURO.0196-17.2017. doi: 10.1523/ENEURO.0196-17.2017. eCollection 2017 Sep-Oct.


Role of Shellfish Aquaculture in the Reduction of Eutrophication in an Urban Estuary.

Bricker SB, Ferreira JG, Zhu C, Rose JM, Galimany E, Wikfors G, Saurel C, Miller RL, Wands J, Trowbridge P, Grizzle R, Wellman K, Rheault R, Steinberg J, Jacob A, Davenport ED, Ayvazian S, Chintala M, Tedesco MA.

Environ Sci Technol. 2018 Jan 2;52(1):173-183. doi: 10.1021/acs.est.7b03970. Epub 2017 Dec 15.

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