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The Complex Response of Free and Bound Amino Acids to Water Stress During the Seed Setting Stage in Arabidopsis.

Yobi A, Bagaza C, Batushansky A, Shrestha V, Emery ML, Holden S, Turner-Hissong S, Miller ND, Mawhinney TP, Angelovici R.

Plant J. 2020 Jan 4. doi: 10.1111/tpj.14668. [Epub ahead of print]


Predicting Zea mays Flowering Time, Yield, and Kernel Dimensions by Analyzing Aerial Images.

Wu G, Miller ND, de Leon N, Kaeppler SM, Spalding EP.

Front Plant Sci. 2019 Oct 11;10:1251. doi: 10.3389/fpls.2019.01251. eCollection 2019.


Correction: Genotype-by-environment interactions affecting heterosis in maize.

Li Z, Coffey L, Garfin J, Miller ND, White MR, Spalding EP, Leon N, Kaeppler SM, Schnable PS, Springer NM, Hirsch CN.

PLoS One. 2019 Aug 5;14(8):e0219528. doi: 10.1371/journal.pone.0219528. eCollection 2019.


Conservation of the genome-wide recombination rate in white-footed mice.

Peterson AL, Miller ND, Payseur BA.

Heredity (Edinb). 2019 Oct;123(4):442-457. doi: 10.1038/s41437-019-0252-9. Epub 2019 Jul 31.


Classifying cold-stress responses of inbred maize seedlings using RGB imaging.

Enders TA, St Dennis S, Oakland J, Callen ST, Gehan MA, Miller ND, Spalding EP, Springer NM, Hirsch CD.

Plant Direct. 2019 Jan 2;3(1):e00104. doi: 10.1002/pld3.104. eCollection 2019 Jan.


A machine vision platform for measuring imbibition of maize kernels: quantification of genetic effects and correlations with germination.

Miller ND, Stelpflug SC, Kaeppler SM, Spalding EP.

Plant Methods. 2018 Dec 21;14:115. doi: 10.1186/s13007-018-0383-7. eCollection 2018.


An Automated Image Analysis Pipeline Enables Genetic Studies of Shoot and Root Morphology in Carrot (Daucus carota L.).

Turner SD, Ellison SL, Senalik DA, Simon PW, Spalding EP, Miller ND.

Front Plant Sci. 2018 Nov 27;9:1703. doi: 10.3389/fpls.2018.01703. eCollection 2018.


Regulation of Root Angle and Gravitropism.

Toal TW, Ron M, Gibson D, Kajala K, Splitt B, Johnson LS, Miller ND, Slovak R, Gaudinier A, Patel R, de Lucas M, Provart NJ, Spalding EP, Busch W, Kliebenstein DJ, Brady SM.

G3 (Bethesda). 2018 Dec 10;8(12):3841-3855. doi: 10.1534/g3.118.200540.


Maize Genomes to Fields: 2014 and 2015 field season genotype, phenotype, environment, and inbred ear image datasets.

AlKhalifah N, Campbell DA, Falcon CM, Gardiner JM, Miller ND, Romay MC, Walls R, Walton R, Yeh CT, Bohn M, Bubert J, Buckler ES, Ciampitti I, Flint-Garcia S, Gore MA, Graham C, Hirsch C, Holland JB, Hooker D, Kaeppler S, Knoll J, Lauter N, Lee EC, Lorenz A, Lynch JP, Moose SP, Murray SC, Nelson R, Rocheford T, Rodriguez O, Schnable JC, Scully B, Smith M, Springer N, Thomison P, Tuinstra M, Wisser RJ, Xu W, Ertl D, Schnable PS, De Leon N, Spalding EP, Edwards J, Lawrence-Dill CJ.

BMC Res Notes. 2018 Jul 9;11(1):452. doi: 10.1186/s13104-018-3508-1.


Distribution of Endogenous NO Regulates Early Gravitropic Response and PIN2 Localization in Arabidopsis Roots.

París R, Vazquez MM, Graziano M, Terrile MC, Miller ND, Spalding EP, Otegui MS, Casalongué CA.

Front Plant Sci. 2018 Apr 20;9:495. doi: 10.3389/fpls.2018.00495. eCollection 2018.


Genotype-by-environment interactions affecting heterosis in maize.

Li Z, Coffey L, Garfin J, Miller ND, White MR, Spalding EP, de Leon N, Kaeppler SM, Schnable PS, Springer NM, Hirsch CN.

PLoS One. 2018 Jan 17;13(1):e0191321. doi: 10.1371/journal.pone.0191321. eCollection 2018. Erratum in: PLoS One. 2019 Aug 5;14(8):e0219528.


Unraveling the biology of bipolar disorder using induced pluripotent stem-derived neurons.

Miller ND, Kelsoe JR.

Bipolar Disord. 2017 Nov;19(7):544-551. doi: 10.1111/bdi.12535. Epub 2017 Nov 8. Review.


Spontaneous polyploidization in cucumber.

Ramírez-Madera AO, Miller ND, Spalding EP, Weng Y, Havey MJ.

Theor Appl Genet. 2017 Jul;130(7):1481-1490. doi: 10.1007/s00122-017-2903-7. Epub 2017 Apr 13.


TIPS: a system for automated image-based phenotyping of maize tassels.

Gage JL, Miller ND, Spalding EP, Kaeppler SM, de Leon N.

Plant Methods. 2017 Mar 31;13:21. doi: 10.1186/s13007-017-0172-8. eCollection 2017.


Constitutive Expression of Arabidopsis SMALL AUXIN UP RNA19 (SAUR19) in Tomato Confers Auxin-Independent Hypocotyl Elongation.

Spartz AK, Lor VS, Ren H, Olszewski NE, Miller ND, Wu G, Spalding EP, Gray WM.

Plant Physiol. 2017 Feb;173(2):1453-1462. doi: 10.1104/pp.16.01514. Epub 2016 Dec 20.


A robust, high-throughput method for computing maize ear, cob, and kernel attributes automatically from images.

Miller ND, Haase NJ, Lee J, Kaeppler SM, de Leon N, Spalding EP.

Plant J. 2017 Jan;89(1):169-178. doi: 10.1111/tpj.13320. Epub 2016 Nov 19.


Role of SKD1 Regulators LIP5 and IST1-LIKE1 in Endosomal Sorting and Plant Development.

Buono RA, Paez-Valencia J, Miller ND, Goodman K, Spitzer C, Spalding EP, Otegui MS.

Plant Physiol. 2016 May;171(1):251-64. doi: 10.1104/pp.16.00240. Epub 2016 Mar 16.


The Cyclic Nucleotide-Gated Channel CNGC14 Regulates Root Gravitropism in Arabidopsis thaliana.

Shih HW, DePew CL, Miller ND, Monshausen GB.

Curr Biol. 2015 Dec 7;25(23):3119-25. doi: 10.1016/j.cub.2015.10.025. Epub 2015 Nov 19.


Discovery of GSK2795039, a Novel Small Molecule NADPH Oxidase 2 Inhibitor.

Hirano K, Chen WS, Chueng AL, Dunne AA, Seredenina T, Filippova A, Ramachandran S, Bridges A, Chaudry L, Pettman G, Allan C, Duncan S, Lee KC, Lim J, Ma MT, Ong AB, Ye NY, Nasir S, Mulyanidewi S, Aw CC, Oon PP, Liao S, Li D, Johns DG, Miller ND, Davies CH, Browne ER, Matsuoka Y, Chen DW, Jaquet V, Rutter AR.

Antioxid Redox Signal. 2015 Aug 10;23(5):358-74. doi: 10.1089/ars.2014.6202.


Synthesis and pharmacological evaluation of dual acting ligands targeting the adenosine A2A and dopamine D2 receptors for the potential treatment of Parkinson's disease.

Jörg M, May LT, Mak FS, Lee KC, Miller ND, Scammells PJ, Capuano B.

J Med Chem. 2015 Jan 22;58(2):718-38. doi: 10.1021/jm501254d. Epub 2014 Dec 24.


The receptor-like kinase FERONIA is required for mechanical signal transduction in Arabidopsis seedlings.

Shih HW, Miller ND, Dai C, Spalding EP, Monshausen GB.

Curr Biol. 2014 Aug 18;24(16):1887-92. doi: 10.1016/j.cub.2014.06.064. Epub 2014 Aug 7.


Novel adenosine A(2A) receptor ligands: a synthetic, functional and computational investigation of selected literature adenosine A(2A) receptor antagonists for extending into extracellular space.

Jörg M, Shonberg J, Mak FS, Miller ND, Yuriev E, Scammells PJ, Capuano B.

Bioorg Med Chem Lett. 2013 Jun 1;23(11):3427-33. doi: 10.1016/j.bmcl.2013.03.070. Epub 2013 Apr 2.


Image analysis is driving a renaissance in growth measurement.

Spalding EP, Miller ND.

Curr Opin Plant Biol. 2013 Feb;16(1):100-4. doi: 10.1016/j.pbi.2013.01.001. Epub 2013 Jan 23. Review.


Mapping quantitative trait loci affecting Arabidopsis thaliana seed morphology features extracted computationally from images.

Moore CR, Gronwall DS, Miller ND, Spalding EP.

G3 (Bethesda). 2013 Jan;3(1):109-18. doi: 10.1534/g3.112.003806. Epub 2013 Jan 1.


A novel series of benzimidazole NR2B-selective NMDA receptor antagonists.

Davies DJ, Crowe M, Lucas N, Quinn J, Miller DD, Pritchard S, Grose D, Bettini E, Calcinaghi N, Virginio C, Abberley L, Goldsmith P, Michel AD, Chessell IP, Kew JN, Miller ND, Gunthorpe MJ.

Bioorg Med Chem Lett. 2012 Apr 1;22(7):2620-3. doi: 10.1016/j.bmcl.2012.01.108. Epub 2012 Feb 6.


AUXIN UP-REGULATED F-BOX PROTEIN1 regulates the cross talk between auxin transport and cytokinin signaling during plant root growth.

Zheng X, Miller ND, Lewis DR, Christians MJ, Lee KH, Muday GK, Spalding EP, Vierstra RD.

Plant Physiol. 2011 Aug;156(4):1878-93. doi: 10.1104/pp.111.179812. Epub 2011 Jun 8.


Auxin and ethylene induce flavonol accumulation through distinct transcriptional networks.

Lewis DR, Ramirez MV, Miller ND, Vallabhaneni P, Ray WK, Helm RF, Winkel BS, Muday GK.

Plant Physiol. 2011 May;156(1):144-64. doi: 10.1104/pp.111.172502. Epub 2011 Mar 22.


Dynamics of auxin-dependent Ca2+ and pH signaling in root growth revealed by integrating high-resolution imaging with automated computer vision-based analysis.

Monshausen GB, Miller ND, Murphy AS, Gilroy S.

Plant J. 2011 Jan;65(2):309-18. doi: 10.1111/j.1365-313X.2010.04423.x. Epub 2010 Dec 16.


Separating parental environment from seed size effects on next generation growth and development in Arabidopsis.

Elwell AL, Gronwall DS, Miller ND, Spalding EP, Brooks TL.

Plant Cell Environ. 2011 Feb;34(2):291-301. doi: 10.1111/j.1365-3040.2010.02243.x. Epub 2010 Nov 12.


Detection of a gravitropism phenotype in glutamate receptor-like 3.3 mutants of Arabidopsis thaliana using machine vision and computation.

Miller ND, Durham Brooks TL, Assadi AH, Spalding EP.

Genetics. 2010 Oct;186(2):585-93. doi: 10.1534/genetics.110.118711. Epub 2010 Jul 20.


Plasticity of Arabidopsis root gravitropism throughout a multidimensional condition space quantified by automated image analysis.

Brooks TL, Miller ND, Spalding EP.

Plant Physiol. 2010 Jan;152(1):206-16. doi: 10.1104/pp.109.145292. Epub 2009 Nov 18.


Real-time reverse-transcriptase--polymerase chain reaction for Salmonella enterica detection from jalapeño and serrano peppers.

Miller ND, Draughon FA, D'Souza DH.

Foodborne Pathog Dis. 2010 Apr;7(4):367-73. doi: 10.1089/fpd.2009.0398.


Procognitive 5-HT6 antagonists in the rat forced swimming test: potential therapeutic utility in mood disorders associated with Alzheimer's disease.

Hirano K, Piers TM, Searle KL, Miller ND, Rutter AR, Chapman PF.

Life Sci. 2009 Apr 10;84(15-16):558-62. doi: 10.1016/j.lfs.2009.01.019. Epub 2009 Feb 7.


Molecular (SNP) analyses of overlapping hemizygous deletions of 10q25.3 to 10qter in four patients: evidence for HMX2 and HMX3 as candidate genes in hearing and vestibular function.

Miller ND, Nance MA, Wohler ES, Hoover-Fong JE, Lisi E, Thomas GH, Pevsner J.

Am J Med Genet A. 2009 Feb 15;149A(4):669-80. doi: 10.1002/ajmg.a.32705.


5-HT6 receptor antagonists: prospects for the treatment of cognitive disorders including dementia.

Johnson CN, Ahmed M, Miller ND.

Curr Opin Drug Discov Devel. 2008 Sep;11(5):642-54. Review.


Estimating genome-wide copy number using allele-specific mixture models.

Wang W, Carvalho B, Miller ND, Pevsner J, Chakravarti A, Irizarry RA.

J Comput Biol. 2008 Sep;15(7):857-66. doi: 10.1089/cmb.2007.0148.


Intramolecular palladium-catalyzed direct arylation of alkenyl triflates.

Cruz AC, Miller ND, Willis MC.

Org Lett. 2007 Oct 11;9(21):4391-3. Epub 2007 Sep 13.


Computer-vision analysis of seedling responses to light and gravity.

Miller ND, Parks BM, Spalding EP.

Plant J. 2007 Oct;52(2):374-81. Epub 2007 Aug 16.


Promoter, alternative splice forms, and genomic structure of protocadherin 15.

Alagramam KN, Miller ND, Adappa ND, Pitts DR, Heaphy JC, Yuan H, Smith RJ.

Genomics. 2007 Oct;90(4):482-92. Epub 2007 Aug 15.


Visualization of uniparental inheritance, Mendelian inconsistencies, deletions, and parent of origin effects in single nucleotide polymorphism trio data with SNPtrio.

Ting JC, Roberson ED, Miller ND, Lysholm-Bernacchi A, Stephan DA, Capone GT, Ruczinski I, Thomas GH, Pevsner J.

Hum Mutat. 2007 Dec;28(12):1225-35.


2,5-Diketopiperazines as potent and selective oxytocin antagonists 1: Identification, stereochemistry and initial SAR.

Wyatt PG, Allen MJ, Borthwick AD, Davies DE, Exall AM, Hatley RJ, Irving WR, Livermore DG, Miller ND, Nerozzi F, Sollis SL, Szardenings AK.

Bioorg Med Chem Lett. 2005 May 16;15(10):2579-82.


Investigation of a stereoselective co-mediated rearrangement reaction.

Carbery DR, Reignier S, Miller ND, Adams H, Harrity JP.

J Org Chem. 2003 May 30;68(11):4392-9.


Differentiating pay is not the answer!

Sliski SK, Bianchi C, Concepcion ZG, Fall ME, Fanning PA, Fitzgerald SL, Miller ND, Mills JC, O'Donnell DA, Praetsch JE, Cavallaro-Wedekind M, West MC, Zarrella DA, George E; Spring 2002 Advanced Nursing Administration III.

J Nurs Adm. 2002 Oct;32(10):493-4. No abstract available.


Development of a co-mediated rearrangement reaction.

Carbery DR, Reignier S, Myatt JW, Miller ND, Harrity JP.

Angew Chem Int Ed Engl. 2002 Jul 15;41(14):2584-7. No abstract available.


Tandem cobalt mediated rearrangement and Pauson-Khand reaction for the synthesis of functionalized polycyclic systems.

Carbery DR, Miller ND, Harrity JP.

Chem Commun (Camb). 2002 Jul 21;(14):1546-7.


Structure-activity relationship investigations of a potent and selective benzodiazepine oxytocin antagonist.

Wyatt PG, Allen MJ, Chilcott J, Hickin G, Miller ND, Woollard PM.

Bioorg Med Chem Lett. 2001 May 21;11(10):1301-5.


Clinical issues relating to the diagnosis of mild dementia in a British community survey.

O'Connor DW, Pollitt PA, Hyde JB, Miller ND, Fellowes JL.

Arch Neurol. 1991 May;48(5):530-4.


The progression of mild idiopathic dementia in a community population.

O'Connor DW, Pollitt PA, Hyde JB, Fellowes JL, Miller ND, Roth M.

J Am Geriatr Soc. 1991 Mar;39(3):246-51.


Continued clinical validation of dementia diagnosed in the community using the Cambridge Mental Disorders of the Elderly Examination.

O'Connor DW, Pollitt PA, Jones BJ, Hyde JB, Fellowes JL, Miller ND.

Acta Psychiatr Scand. 1991 Jan;83(1):41-5.


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