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Salmonid gene expression biomarkers indicative of physiological responses to changes in salinity, temperature, but not dissolved oxygen.

Houde ALS, Akbarzadeh A, Günther OP, Li S, Patterson DA, Farrell AP, Hinch SG, Miller KM.

J Exp Biol. 2019 Jun 17. pii: jeb.198036. doi: 10.1242/jeb.198036. [Epub ahead of print]


Evidence of a hydraulically challenging reach serving as a barrier for the upstream migration of infection-burdened adult steelhead.

Twardek WM, Chapman JM, Miller KM, Beere MC, Li S, Kaukinen KH, Danylchuk AJ, Cooke SJ.

Conserv Physiol. 2019 Jun 6;7(1):coz023. doi: 10.1093/conphys/coz023. eCollection 2019.


Preserving genome integrity and function: the DNA damage response and histone modifications.

Kim JJ, Lee SY, Miller KM.

Crit Rev Biochem Mol Biol. 2019 Jun 4:1-34. doi: 10.1080/10409238.2019.1620676. [Epub ahead of print]


The T1D Exchange Clinic Network and Registry: 10 Years of Enlightenment on the State of Type 1 Diabetes in the United States.

Beck RW, Miller KM, Foster NC.

Diabetes Technol Ther. 2019 Jun;21(6):310-312. doi: 10.1089/dia.2019.0129. No abstract available.


In Time and Space: Laser Microirradiation and the DNA Damage Response.

Kim JJ, Kumbhar R, Gong F, Miller KM.

Methods Mol Biol. 2019;1999:61-74. doi: 10.1007/978-1-4939-9500-4_3.


Associations between Adverse Childhood Experiences, Major Depressive Episode and Chronic Physical Health in Adolescents: Moderation of Race/Ethnicity.

Elkins J, Miller KM, Briggs HE, Kim I, Mowbray O, Orellana ER.

Soc Work Public Health. 2019;34(5):444-456. doi: 10.1080/19371918.2019.1617216. Epub 2019 May 22.


Distribution and Phylogeny of Erythrocytic Necrosis Virus (ENV) in Salmon Suggests Marine Origin.

Pagowski VA, Mordecai GJ, Miller KM, Schulze AD, Kaukinen KH, Ming TJ, Li S, Teffer AK, Tabata A, Suttle CA.

Viruses. 2019 Apr 18;11(4). pii: E358. doi: 10.3390/v11040358.


Extending the use of the Body Appreciation Scale -2 in older adults: A Portuguese validation study.

Meneses L, Torres S, Miller KM, Barbosa MR.

Body Image. 2019 Jun;29:74-81. doi: 10.1016/j.bodyim.2019.02.011. Epub 2019 Mar 9.


Infectious agent detections in archived Sockeye salmon (Oncorhynchus nerka) samples from British Columbia, Canada (1985-94).

Thakur KK, Vanderstichel R, Kaukinen K, Nekouei O, Laurin E, Miller KM.

J Fish Dis. 2019 Apr;42(4):533-547. doi: 10.1111/jfd.12951. Epub 2019 Feb 11.


Betrixaban for Extended Venous Thromboembolism Prophylaxis in High-Risk Hospitalized Patients: Putting the APEX Results into Practice.

Miller KM, Brenner MJ.

Drugs. 2019 Feb;79(3):291-302. doi: 10.1007/s40265-019-1059-y. Review.


State of Type 1 Diabetes Management and Outcomes from the T1D Exchange in 2016-2018.

Foster NC, Beck RW, Miller KM, Clements MA, Rickels MR, DiMeglio LA, Maahs DM, Tamborlane WV, Bergenstal R, Smith E, Olson BA, Garg SK.

Diabetes Technol Ther. 2019 Feb;21(2):66-72. doi: 10.1089/dia.2018.0384. Epub 2019 Jan 18. Erratum in: Diabetes Technol Ther. 2019 Apr;21(4):230.


Guidelines for DNA recombination and repair studies: Cellular assays of DNA repair pathways.

Klein HL, Bačinskaja G, Che J, Cheblal A, Elango R, Epshtein A, Fitzgerald DM, Gómez-González B, Khan SR, Kumar S, Leland BA, Marie L, Mei Q, Miné-Hattab J, Piotrowska A, Polleys EJ, Putnam CD, Radchenko EA, Saada AA, Sakofsky CJ, Shim EY, Stracy M, Xia J, Yan Z, Yin Y, Aguilera A, Argueso JL, Freudenreich CH, Gasser SM, Gordenin DA, Haber JE, Ira G, Jinks-Robertson S, King MC, Kolodner RD, Kuzminov A, Lambert SA, Lee SE, Miller KM, Mirkin SM, Petes TD, Rosenberg SM, Rothstein R, Symington LS, Zawadzki P, Kim N, Lisby M, Malkova A.

Microb Cell. 2019 Jan 7;6(1):1-64. doi: 10.15698/mic2019.01.664. Review.


Racial Differences in Trajectories of Hemoglobin A1c: Further Evidence of Gaps in Care.

Miller KM.

JAMA Netw Open. 2018 Sep 7;1(5):e181882. doi: 10.1001/jamanetworkopen.2018.1882. No abstract available.


Bacteria-to-Human Protein Networks Reveal Origins of Endogenous DNA Damage.

Xia J, Chiu LY, Nehring RB, Bravo Núñez MA, Mei Q, Perez M, Zhai Y, Fitzgerald DM, Pribis JP, Wang Y, Hu CW, Powell RT, LaBonte SA, Jalali A, Matadamas Guzmán ML, Lentzsch AM, Szafran AT, Joshi MC, Richters M, Gibson JL, Frisch RL, Hastings PJ, Bates D, Queitsch C, Hilsenbeck SG, Coarfa C, Hu JC, Siegele DA, Scott KL, Liang H, Mancini MA, Herman C, Miller KM, Rosenberg SM.

Cell. 2019 Jan 10;176(1-2):127-143.e24. doi: 10.1016/j.cell.2018.12.008.


Detection and Assessment of the Distribution of Infectious Agents in Juvenile Fraser River Sockeye Salmon, Canada, in 2012 and 2013.

Nekouei O, Vanderstichel R, Ming T, Kaukinen KH, Thakur K, Tabata A, Laurin E, Tucker S, Beacham TD, Miller KM.

Front Microbiol. 2018 Dec 21;9:3221. doi: 10.3389/fmicb.2018.03221. eCollection 2018.


Sae2/CtIP prevents R-loop accumulation in eukaryotic cells.

Makharashvili N, Arora S, Yin Y, Fu Q, Wen X, Lee JH, Kao CH, Leung JW, Miller KM, Paull TT.

Elife. 2018 Dec 7;7. pii: e42733. doi: 10.7554/eLife.42733.


Phacoemulsifier occlusion break surge volume reduction.

Thorne A, Dyk DW, Fanney D, Miller KM.

J Cataract Refract Surg. 2018 Dec;44(12):1491-1496. doi: 10.1016/j.jcrs.2018.01.032.


Transcriptional shifts during juvenile Coho salmon (Oncorhynchus kisutch) life stage changes in freshwater and early marine environments.

Houde ALS, Schulze AD, Kaukinen KH, Strohm J, Patterson DA, Beacham TD, Farrell AP, Hinch SG, Miller KM.

Comp Biochem Physiol Part D Genomics Proteomics. 2019 Mar;29:32-42. doi: 10.1016/j.cbd.2018.10.002. Epub 2018 Oct 18.


Pregnancy Outcomes after Early Amniotomy among Class III Obese Gravidas Undergoing Induction of Labor.

Pasko DN, Miller KM, Jauk VC, Subramaniam A.

Am J Perinatol. 2019 Apr;36(5):449-454. doi: 10.1055/s-0038-1675331. Epub 2018 Nov 5.


Arginine starvation kills tumor cells through aspartate exhaustion and mitochondrial dysfunction.

Cheng CT, Qi Y, Wang YC, Chi KK, Chung Y, Ouyang C, Chen YR, Oh ME, Sheng X, Tang Y, Liu YR, Lin HH, Kuo CY, Schones D, Vidal CM, Chu JC, Wang HJ, Chen YH, Miller KM, Chu P, Yen Y, Jiang L, Kung HJ, Ann DK.

Commun Biol. 2018 Oct 26;1:178. doi: 10.1038/s42003-018-0178-4. eCollection 2018.


KDM5A Regulates a Translational Program that Controls p53 Protein Expression.

Hu D, Jablonowski C, Cheng PH, AlTahan A, Li C, Wang Y, Palmer L, Lan C, Sun B, Abu-Zaid A, Fan Y, Brimble M, Gamboa NT, Kumbhar RC, Yanishevski D, Miller KM, Kang G, Zambetti GP, Chen T, Yan Q, Davidoff AM, Yang J.

iScience. 2018 Nov 30;9:84-100. doi: 10.1016/j.isci.2018.10.012. Epub 2018 Oct 17.


Developing specific molecular biomarkers for thermal stress in salmonids.

Akbarzadeh A, Günther OP, Houde AL, Li S, Ming TJ, Jeffries KM, Hinch SG, Miller KM.

BMC Genomics. 2018 Oct 16;19(1):749. doi: 10.1186/s12864-018-5108-9.


Revised fish aging techniques improve fish contaminant trend analyses in the face of changing Great Lakes food webs.

Murphy EW, Smith ML, He JX, Wellenkamp W, Barr E, Downey PC, Miller KM, Meyer KA.

J Great Lakes Res. 2018 Aug;44(4):725-734. doi: 10.1016/j.jglr.2018.05.006.


Transcriptomic responses of Serratia liquefaciens cells grown under simulated Martian conditions of low temperature, low pressure, and CO2-enriched anoxic atmosphere.

Fajardo-Cavazos P, Morrison MD, Miller KM, Schuerger AC, Nicholson WL.

Sci Rep. 2018 Oct 8;8(1):14938. doi: 10.1038/s41598-018-33140-4.


Fluorescent fusions of the N protein of phage Mu label DNA damage in living cells.

Kotlajich MV, Xia J, Zhai Y, Lin HY, Bradley CC, Shen X, Mei Q, Wang AZ, Lynn EJ, Shee C, Chen LT, Li L, Miller KM, Herman C, Hastings PJ, Rosenberg SM.

DNA Repair (Amst). 2018 Dec;72:86-92. doi: 10.1016/j.dnarep.2018.09.005. Epub 2018 Sep 14.


Correction to: Introduction to the Special Issue on Taking Home Visiting to Scale: Findings from the Maternal, Infant, and Early Childhood Home Visiting Program State-Led Evaluations.

Denmark N, Peplinski K, Sparr M, Labiner-Wolfe J, Zaid S, Gupta P, Miller KM.

Matern Child Health J. 2018 Oct;22(Suppl 1):114. doi: 10.1007/s10995-018-2616-9.


CRISPR/Cas9 Gene Editing of Human Histone H2A Variant H2AX and MacroH2A.

Leung JWC, Emery LE, Miller KM.

Methods Mol Biol. 2018;1832:255-269. doi: 10.1007/978-1-4939-8663-7_14.


Safety and efficacy of black iris diaphragm intraocular lens implantation in eyes with large iris defects: Report 4.

Miller KM, Kuo A, Olson MD, Masket S.

J Cataract Refract Surg. 2018 Jun;44(6):686-700. doi: 10.1016/j.jcrs.2018.03.033. Epub 2018 Jul 4.


Dyslipidaemia and statin use in individuals aged 10 to <40 years in the T1D Exchange clinic registry.

Lyons SK, Boyle CT, DeSalvo DJ, Rickels MR, Wood Heickman LK, Miller KM, Foster NC, Clements MA; T1D Exchange Clinic Network.

Diabetes Obes Metab. 2019 Jan;21(1):170-172. doi: 10.1111/dom.13475. Epub 2018 Aug 16.


Total Lifestyle Coaching: A Pilot Study Evaluating the Effectiveness of a Mind-Body and Nutrition Telephone Coaching Program for Obese Adults at a Community Health Center.

Chad-Friedman E, Pearsall M, Miller KM, Wheeler AE, Denninger JW, Mehta DH, Dossett ML.

Glob Adv Health Med. 2018 Jul 4;7:2164956118784902. doi: 10.1177/2164956118784902. eCollection 2018.


Aqueous volume loss associated with occlusion break surge in phacoemulsifiers from 4 different manufacturers.

Aravena C, Dyk DW, Thorne A, Fanney D, Miller KM.

J Cataract Refract Surg. 2018 Jul;44(7):884-888. doi: 10.1016/j.jcrs.2018.02.026. Epub 2018 Jun 21.


Continuous glucose monitoring and glycemic control among youth with type 1 diabetes: International comparison from the T1D Exchange and DPV Initiative.

DeSalvo DJ, Miller KM, Hermann JM, Maahs DM, Hofer SE, Clements MA, Lilienthal E, Sherr JL, Tauschmann M, Holl RW; T1D Exchange and DPV Registries.

Pediatr Diabetes. 2018 Nov;19(7):1271-1275. doi: 10.1111/pedi.12711. Epub 2018 Jul 1.


Introduction to the Special Issue on Taking Home Visiting to Scale: Findings from the Maternal, Infant, and Early Childhood Home Visiting Program State-Led Evaluations.

Denmark N, Peplinski K, Sparr M, Labiner-Wolfe J, Zaid S, Gupta P, Miller KM.

Matern Child Health J. 2018 Oct;22(Suppl 1):1-2. doi: 10.1007/s10995-018-2539-5. Erratum in: Matern Child Health J. 2018 Aug 22;:.


Isoform-specific deletion of PKM2 constrains tumor initiation in a mouse model of soft tissue sarcoma.

Dayton TL, Gocheva V, Miller KM, Bhutkar A, Lewis CA, Bronson RT, Vander Heiden MG, Jacks T.

Cancer Metab. 2018 May 31;6:6. doi: 10.1186/s40170-018-0179-2. eCollection 2018.


Thiamine Levels in Muscle and Eggs of Adult Pacific Salmon from the Fraser River, British Columbia.

Welch DW, Futia MH, Rinchard J, Teffer AK, Miller KM, Hinch SG, Honeyfield DC.

J Aquat Anim Health. 2018 Sep;30(3):191-200. doi: 10.1002/aah.10024. Epub 2018 Jul 10.


Human Activity Determines the Presence of Integron-Associated and Antibiotic Resistance Genes in Southwestern British Columbia.

Uyaguari-Díaz MI, Croxen MA, Luo Z, Cronin KI, Chan M, Baticados WN, Nesbitt MJ, Li S, Miller KM, Dooley D, Hsiao W, Isaac-Renton JL, Tang P, Prystajecky N.

Front Microbiol. 2018 May 1;9:852. doi: 10.3389/fmicb.2018.00852. eCollection 2018.


Outcomes of cataract surgery in eyes with ocular melanoma treated with iodine-125 brachytherapy.

Bozkurt TK, Tang Q, Grunstein LL, McCannel TA, Straatsma BR, Miller KM.

J Cataract Refract Surg. 2018 Mar;44(3):287-294. doi: 10.1016/j.jcrs.2017.12.019.


Distinct seasonal infectious agent profiles in life-history variants of juvenile Fraser River Chinook salmon: An application of high-throughput genomic screening.

Tucker S, Li S, Kaukinen KH, Patterson DA, Miller KM.

PLoS One. 2018 Apr 19;13(4):e0195472. doi: 10.1371/journal.pone.0195472. eCollection 2018.


Olfactory gene expression in migrating adult sockeye salmon Oncorhynchus nerka.

Bett NN, Hinch SG, Kaukinen KH, Li S, Miller KM.

J Fish Biol. 2018 Jun;92(6):2029-2038. doi: 10.1111/jfb.13633. Epub 2018 May 15.


Exploring Variation in Glycemic Control Across and Within Eight High-Income Countries: A Cross-sectional Analysis of 64,666 Children and Adolescents With Type 1 Diabetes.

Charalampopoulos D, Hermann JM, Svensson J, Skrivarhaug T, Maahs DM, Akesson K, Warner JT, Holl RW, Birkebæk NH, Drivvoll AK, Miller KM, Svensson AM, Stephenson T, Hofer SE, Fredheim S, Kummernes SJ, Foster N, Hanberger L, Amin R, Rami-Merhar B, Johansen A, Dahl-Jørgensen K, Clements M, Hanas R.

Diabetes Care. 2018 Jun;41(6):1180-1187. doi: 10.2337/dc17-2271. Epub 2018 Apr 12.


Mechanical model of human eye compliance for volumetric occlusion break surge measurements.

Dyk DW, Miller KM.

J Cataract Refract Surg. 2018 Feb;44(2):231-236. doi: 10.1016/j.jcrs.2017.10.052.


Lessons Learned from Implantation of Morcher 50D and 96S Artificial Iris Diaphragms.

Lin SR, Miller KM.

Case Rep Ophthalmol. 2017 Nov 23;8(3):527-534. doi: 10.1159/000484128. eCollection 2017 Sep-Dec.


Double duty: ZMYND8 in the DNA damage response and cancer.

Gong F, Miller KM.

Cell Cycle. 2018;17(4):414-420. doi: 10.1080/15384101.2017.1376150. Epub 2018 Mar 19.


Caught with One's Zinc Fingers in the Genome Integrity Cookie Jar.

Vilas CK, Emery LE, Denchi EL, Miller KM.

Trends Genet. 2018 Apr;34(4):313-325. doi: 10.1016/j.tig.2017.12.011. Epub 2018 Jan 19. Review.


Donepezil Reverses Dendritic Spine Morphology Adaptations and Fmr1 Epigenetic Modifications in Hippocampus of Adult Rats After Adolescent Alcohol Exposure.

Mulholland PJ, Teppen TL, Miller KM, Sexton HG, Pandey SC, Swartzwelder HS.

Alcohol Clin Exp Res. 2018 Apr;42(4):706-717. doi: 10.1111/acer.13599. Epub 2018 Feb 15.


The Genome of the Beluga Whale (Delphinapterus leucas).

Jones SJM, Taylor GA, Chan S, Warren RL, Hammond SA, Bilobram S, Mordecai G, Suttle CA, Miller KM, Schulze A, Chan AM, Jones SJ, Tse K, Li I, Cheung D, Mungall KL, Choo C, Ally A, Dhalla N, Tam AKY, Troussard A, Kirk H, Pandoh P, Paulino D, Coope RJN, Mungall AJ, Moore R, Zhao Y, Birol I, Ma Y, Marra M, Haulena M.

Genes (Basel). 2017 Dec 11;8(12). pii: E378. doi: 10.3390/genes8120378.


Reported gastroparesis in adults with type 1 diabetes (T1D) from the T1D Exchange clinic registry.

Aleppo G, Calhoun P, Foster NC, Maahs DM, Shah VN, Miller KM; T1D Exchange Clinic Network.

J Diabetes Complications. 2017 Dec;31(12):1669-1673. doi: 10.1016/j.jdiacomp.2017.08.014. Epub 2017 Sep 6.


Timing of Meal Insulin and Its Relation to Adherence to Therapy in Type 1 Diabetes.

Datye KA, Boyle CT, Simmons J, Moore DJ, Jaser SS, Sheanon N, Kittelsrud JM, Woerner SE, Miller KM; T1D Exchange.

J Diabetes Sci Technol. 2018 Mar;12(2):349-355. doi: 10.1177/1932296817728525. Epub 2017 Sep 12.


Capture severity, infectious disease processes and sex influence post-release mortality of sockeye salmon bycatch.

Teffer AK, Hinch SG, Miller KM, Patterson DA, Farrell AP, Cooke SJ, Bass AL, Szekeres P, Juanes F.

Conserv Physiol. 2017 Mar 28;5(1):cox017. doi: 10.1093/conphys/cox017. eCollection 2017.


Bromodomain proteins: repairing DNA damage within chromatin.

Chiu LY, Gong F, Miller KM.

Philos Trans R Soc Lond B Biol Sci. 2017 Oct 5;372(1731). pii: 20160286. doi: 10.1098/rstb.2016.0286. Review.

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