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Items: 1 to 50 of 320

1.

Better research by efficient sharing: evaluation of free management platforms for synthetic biology designs.

Urquiza-García U, Zieliński T, Millar AJ.

Synth Biol (Oxf). 2019;4(1):ysz016. doi: 10.1093/synbio/ysz016. Epub 2019 Jun 20.

2.

The grant is dead, long live the data - migration as a pragmatic exit strategy for research data preservation.

Zielinski T, Hay J, Millar AJ.

Wellcome Open Res. 2019 Jul 2;4:104. doi: 10.12688/wellcomeopenres.15341.1. eCollection 2019.

3.

Expanding the bioluminescent reporter toolkit for plant science with NanoLUC.

Urquiza-García U, Millar AJ.

Plant Methods. 2019 Jul 8;15:68. doi: 10.1186/s13007-019-0454-4. eCollection 2019.

4.

A multi-model framework for the Arabidopsis life cycle.

Zardilis A, Hume A, Millar AJ.

J Exp Bot. 2019 Apr 29;70(9):2463-2477. doi: 10.1093/jxb/ery394.

5.

Practical steps to digital organism models, from laboratory model species to 'Crops in silico.

Millar AJ, Urquiza U, Freeman PL, Hume A, Plotkin GD, Sorokina O, Zardilis A, Zielinski T.

J Exp Bot. 2019 Apr 29;70(9):2403-2418. doi: 10.1093/jxb/ery435.

PMID:
30615184
6.

Time-resolved interaction proteomics of the GIGANTEA protein under diurnal cycles in Arabidopsis.

Krahmer J, Goralogia GS, Kubota A, Zardilis A, Johnson RS, Song YH, MacCoss MJ, Le Bihan T, Halliday KJ, Imaizumi T, Millar AJ.

FEBS Lett. 2019 Feb;593(3):319-338. doi: 10.1002/1873-3468.13311. Epub 2018 Dec 28.

7.

Molecular basis of flowering under natural long-day conditions in Arabidopsis.

Song YH, Kubota A, Kwon MS, Covington MF, Lee N, Taagen ER, Laboy Cintrón D, Hwang DY, Akiyama R, Hodge SK, Huang H, Nguyen NH, Nusinow DA, Millar AJ, Shimizu KK, Imaizumi T.

Nat Plants. 2018 Oct;4(10):824-835. doi: 10.1038/s41477-018-0253-3. Epub 2018 Sep 24.

8.

Multiple circadian clock outputs regulate diel turnover of carbon and nitrogen reserves.

Flis A, Mengin V, Ivakov AA, Mugford ST, Hubberten HM, Encke B, Krohn N, Höhne M, Feil R, Hoefgen R, Lunn JE, Millar AJ, Smith AM, Sulpice R, Stitt M.

Plant Cell Environ. 2019 Feb;42(2):549-573. doi: 10.1111/pce.13440.

PMID:
30184255
9.

Correlation of 99mTc sucralfate scan and endoscopic grading in caustic oesophageal injury.

Nondela BB, Cox SG, Brink A, Millar AJW, Numanoglu A.

Pediatr Surg Int. 2018 Jul;34(7):781-788. doi: 10.1007/s00383-018-4276-7. Epub 2018 May 14.

PMID:
29761251
10.

Circadian clock components control daily growth activities by modulating cytokinin levels and cell division-associated gene expression in Populus trees.

Edwards KD, Takata N, Johansson M, Jurca M, Novák O, Hényková E, Liverani S, Kozarewa I, Strnad M, Millar AJ, Ljung K, Eriksson ME.

Plant Cell Environ. 2018 Jun;41(6):1468-1482. doi: 10.1111/pce.13185. Epub 2018 Apr 15.

11.

Photoperiodic control of the Arabidopsis proteome reveals a translational coincidence mechanism.

Seaton DD, Graf A, Baerenfaller K, Stitt M, Millar AJ, Gruissem W.

Mol Syst Biol. 2018 Mar 1;14(3):e7962. doi: 10.15252/msb.20177962.

12.

Guidelines for Genome-Scale Analysis of Biological Rhythms.

Hughes ME, Abruzzi KC, Allada R, Anafi R, Arpat AB, Asher G, Baldi P, de Bekker C, Bell-Pedersen D, Blau J, Brown S, Ceriani MF, Chen Z, Chiu JC, Cox J, Crowell AM, DeBruyne JP, Dijk DJ, DiTacchio L, Doyle FJ, Duffield GE, Dunlap JC, Eckel-Mahan K, Esser KA, FitzGerald GA, Forger DB, Francey LJ, Fu YH, Gachon F, Gatfield D, de Goede P, Golden SS, Green C, Harer J, Harmer S, Haspel J, Hastings MH, Herzel H, Herzog ED, Hoffmann C, Hong C, Hughey JJ, Hurley JM, de la Iglesia HO, Johnson C, Kay SA, Koike N, Kornacker K, Kramer A, Lamia K, Leise T, Lewis SA, Li J, Li X, Liu AC, Loros JJ, Martino TA, Menet JS, Merrow M, Millar AJ, Mockler T, Naef F, Nagoshi E, Nitabach MN, Olmedo M, Nusinow DA, Ptáček LJ, Rand D, Reddy AB, Robles MS, Roenneberg T, Rosbash M, Ruben MD, Rund SSC, Sancar A, Sassone-Corsi P, Sehgal A, Sherrill-Mix S, Skene DJ, Storch KF, Takahashi JS, Ueda HR, Wang H, Weitz C, Westermark PO, Wijnen H, Xu Y, Wu G, Yoo SH, Young M, Zhang EE, Zielinski T, Hogenesch JB.

J Biol Rhythms. 2017 Oct;32(5):380-393. doi: 10.1177/0748730417728663. Epub 2017 Nov 3.

13.

Surgical management and outcomes of 12 cases of Wilms tumour with intracardiac extension from a single centre.

Cox SG, Davidson A, Thomas J, Brooks A, Hewitson J, Numanoglu A, Millar AJW.

Pediatr Surg Int. 2018 Feb;34(2):227-235. doi: 10.1007/s00383-017-4197-x. Epub 2017 Oct 11.

PMID:
29022081
14.

Outcomes of Esophageal Replacement: Gastric Pull-Up and Colonic Interposition Procedures.

Bradshaw CJ, Sloan K, Morandi A, Lakshminarayanan B, Cox SG, Millar AJW, Numanoglu A, Lakhoo K.

Eur J Pediatr Surg. 2018 Feb;28(1):22-29. doi: 10.1055/s-0037-1607041. Epub 2017 Sep 25.

PMID:
28946161
15.

Crops In Silico: Generating Virtual Crops Using an Integrative and Multi-scale Modeling Platform.

Marshall-Colon A, Long SP, Allen DK, Allen G, Beard DA, Benes B, von Caemmerer S, Christensen AJ, Cox DJ, Hart JC, Hirst PM, Kannan K, Katz DS, Lynch JP, Millar AJ, Panneerselvam B, Price ND, Prusinkiewicz P, Raila D, Shekar RG, Shrivastava S, Shukla D, Srinivasan V, Stitt M, Turk MJ, Voit EO, Wang Y, Yin X, Zhu XG.

Front Plant Sci. 2017 May 15;8:786. doi: 10.3389/fpls.2017.00786. eCollection 2017.

16.

Management of bilateral Wilms tumours.

Millar AJW, Cox S, Davidson A.

Pediatr Surg Int. 2017 Jul;33(7):737-745. doi: 10.1007/s00383-017-4091-6. Epub 2017 May 17. Review.

PMID:
28516188
17.

Management of bilateral Wilms tumours.

Millar AJ, Cox S, Davidson A.

Pediatr Surg Int. 2017 Apr;33(4):461-469. doi: 10.1007/s00383-016-4047-2. Epub 2017 Jan 4. Review.

PMID:
28054101
18.

Management of paediatric liver trauma.

van As AB, Millar AJ.

Pediatr Surg Int. 2017 Apr;33(4):445-453. doi: 10.1007/s00383-016-4046-3. Epub 2016 Dec 27. Review.

PMID:
28028561
19.

Total Esophageal Gastric Dissociation for the Failed Antireflux Procedure in a Child with Microgastria.

Hattori K, Bvulani B, Numanoglu A, Cox SG, Millar AJ.

European J Pediatr Surg Rep. 2016 Dec;4(1):6-9. doi: 10.1055/s-0035-1571176. Epub 2016 Jan 22.

20.

Management of Bilateral Wilms Tumours.

Millar AJW, Cox S, Davidson A.

In: van den Heuvel-Eibrink MM, editor. Wilms Tumor [Internet]. Brisbane (AU): Codon Publications; 2016 Mar. Chapter 5.

21.

Organ specificity in the plant circadian system is explained by different light inputs to the shoot and root clocks.

Bordage S, Sullivan S, Laird J, Millar AJ, Nimmo HG.

New Phytol. 2016 Oct;212(1):136-49. doi: 10.1111/nph.14024. Epub 2016 May 31.

22.

Photoperiod-dependent changes in the phase of core clock transcripts and global transcriptional outputs at dawn and dusk in Arabidopsis.

Flis A, Sulpice R, Seaton DD, Ivakov AA, Liput M, Abel C, Millar AJ, Stitt M.

Plant Cell Environ. 2016 Sep;39(9):1955-81. doi: 10.1111/pce.12754. Epub 2016 Jul 15.

23.
24.

Government's lack of knowledge of how medical hierarchy is structured.

Millar AJ.

BMJ. 2016 Mar 8;352:i1331. doi: 10.1136/bmj.i1331. No abstract available.

PMID:
26957515
25.

The Intracellular Dynamics of Circadian Clocks Reach for the Light of Ecology and Evolution.

Millar AJ.

Annu Rev Plant Biol. 2016 Apr 29;67:595-618. doi: 10.1146/annurev-arplant-043014-115619. Epub 2015 Nov 19. Review.

PMID:
26653934
26.

Plants in silico: why, why now and what?--an integrative platform for plant systems biology research.

Zhu XG, Lynch JP, LeBauer DS, Millar AJ, Stitt M, Long SP.

Plant Cell Environ. 2016 May;39(5):1049-57. doi: 10.1111/pce.12673. Epub 2015 Dec 21. Review.

27.

The significance of social determinants of health on the outcome of surgical neonates in a third world setting.

Brown S, Millar AJ, Cox SG.

Pediatr Surg Int. 2016 Feb;32(2):101-7. doi: 10.1007/s00383-015-3819-4. Epub 2015 Oct 31.

PMID:
26520655
28.

Defining the robust behaviour of the plant clock gene circuit with absolute RNA timeseries and open infrastructure.

Flis A, Fernández AP, Zielinski T, Mengin V, Sulpice R, Stratford K, Hume A, Pokhilko A, Southern MM, Seaton DD, McWatters HG, Stitt M, Halliday KJ, Millar AJ.

Open Biol. 2015 Oct;5(10). pii: 150042. doi: 10.1098/rsob.150042.

29.

Local anesthetic wound infusion versus standard analgesia in paediatric post-operative pain control.

Machoki MS, Millar AJ, Albetyn H, Cox SG, Thomas J, Numanoglu A.

Pediatr Surg Int. 2015 Nov;31(11):1087-97. doi: 10.1007/s00383-015-3796-7. Epub 2015 Sep 25.

PMID:
26407616
30.

A Bayesian approach for structure learning in oscillating regulatory networks.

Trejo Banos D, Millar AJ, Sanguinetti G.

Bioinformatics. 2015 Nov 15;31(22):3617-24. doi: 10.1093/bioinformatics/btv414. Epub 2015 Jul 14.

31.

Liver tumours in children: current surgical management and role of transplantation.

Millar AJ.

S Afr Med J. 2014 Nov;104(11 Pt 2):813-5. Review.

PMID:
26038795
32.

Bridging the gap between omics and earth system science to better understand how environmental change impacts marine microbes.

Mock T, Daines SJ, Geider R, Collins S, Metodiev M, Millar AJ, Moulton V, Lenton TM.

Glob Chang Biol. 2016 Jan;22(1):61-75. doi: 10.1111/gcb.12983. Epub 2015 Jul 28. Review.

33.

Label-free quantitative analysis of the casein kinase 2-responsive phosphoproteome of the marine minimal model species Ostreococcus tauri.

Le Bihan T, Hindle M, Martin SF, Barrios-Llerena ME, Krahmer J, Kis K, Millar AJ, van Ooijen G.

Proteomics. 2015 Dec;15(23-24):4135-44. doi: 10.1002/pmic.201500086. Epub 2015 Jun 9.

34.

Sample preparation for phosphoproteomic analysis of circadian time series in Arabidopsis thaliana.

Krahmer J, Hindle MM, Martin SF, Le Bihan T, Millar AJ.

Methods Enzymol. 2015;551:405-31. doi: 10.1016/bs.mie.2014.10.022. Epub 2014 Dec 26.

35.

Linked circadian outputs control elongation growth and flowering in response to photoperiod and temperature.

Seaton DD, Smith RW, Song YH, MacGregor DR, Stewart K, Steel G, Foreman J, Penfield S, Imaizumi T, Millar AJ, Halliday KJ.

Mol Syst Biol. 2015 Jan 19;11(1):776. doi: 10.15252/msb.20145766.

36.

Caustic injury of the oesophagus.

Millar AJ, Cox SG.

Pediatr Surg Int. 2015 Feb;31(2):111-21. doi: 10.1007/s00383-014-3642-3. Epub 2014 Nov 29. Review.

PMID:
25432099
37.

Clocks in algae.

Noordally ZB, Millar AJ.

Biochemistry. 2015 Jan 20;54(2):171-83. doi: 10.1021/bi501089x. Epub 2014 Dec 30. Review.

PMID:
25379817
38.

Liver tumours in children: Current surgical management and role of Transplantation.

Millar AJW.

S Afr Med J. 2014 Oct 24;104(11):813-815. doi: 10.7196/samj.8919.

PMID:
29183448
39.

Multiscale digital Arabidopsis predicts individual organ and whole-organism growth.

Chew YH, Wenden B, Flis A, Mengin V, Taylor J, Davey CL, Tindal C, Thomas H, Ougham HJ, de Reffye P, Stitt M, Williams M, Muetzelfeldt R, Halliday KJ, Millar AJ.

Proc Natl Acad Sci U S A. 2014 Sep 30;111(39):E4127-36. doi: 10.1073/pnas.1410238111. Epub 2014 Sep 2. Erratum in: Proc Natl Acad Sci U S A. 2015 May 12;112(19):E2556.

40.

The reduced kinome of Ostreococcus tauri: core eukaryotic signalling components in a tractable model species.

Hindle MM, Martin SF, Noordally ZB, van Ooijen G, Barrios-Llerena ME, Simpson TI, Le Bihan T, Millar AJ.

BMC Genomics. 2014 Aug 2;15:640. doi: 10.1186/1471-2164-15-640.

41.

Light and circadian regulation of clock components aids flexible responses to environmental signals.

Dixon LE, Hodge SK, van Ooijen G, Troein C, Akman OE, Millar AJ.

New Phytol. 2014 Jul;203(2):568-77. doi: 10.1111/nph.12853. Epub 2014 May 20.

42.

Strengths and limitations of period estimation methods for circadian data.

Zielinski T, Moore AM, Troup E, Halliday KJ, Millar AJ.

PLoS One. 2014 May 8;9(5):e96462. doi: 10.1371/journal.pone.0096462. eCollection 2014.

43.

Online period estimation and determination of rhythmicity in circadian data, using the BioDare data infrastructure.

Moore A, Zielinski T, Millar AJ.

Methods Mol Biol. 2014;1158:13-44. doi: 10.1007/978-1-4939-0700-7_2.

PMID:
24792042
44.

Regulatory principles and experimental approaches to the circadian control of starch turnover.

Seaton DD, Ebenhöh O, Millar AJ, Pokhilko A.

J R Soc Interface. 2013 Dec 11;11(91):20130979. doi: 10.1098/rsif.2013.0979. Print 2014 Feb 6.

45.

HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENES1 is required for circadian periodicity through the promotion of nucleo-cytoplasmic mRNA export in Arabidopsis.

MacGregor DR, Gould P, Foreman J, Griffiths J, Bird S, Page R, Stewart K, Steel G, Young J, Paszkiewicz K, Millar AJ, Halliday KJ, Hall AJ, Penfield S.

Plant Cell. 2013 Nov;25(11):4391-404. doi: 10.1105/tpc.113.114959. Epub 2013 Nov 19.

46.

Functional analysis of the rodent CK1tau mutation in the circadian clock of a marine unicellular alga.

van Ooijen G, Martin SF, Barrios-Llerena ME, Hindle M, Le Bihan T, O'Neill JS, Millar AJ.

BMC Cell Biol. 2013 Oct 15;14:46. doi: 10.1186/1471-2121-14-46.

47.

Non-transplant surgery for short bowel syndrome.

Millar AJ.

Pediatr Surg Int. 2013 Oct;29(10):983-7. doi: 10.1007/s00383-013-3390-9. Review.

PMID:
23982389
48.

Functional analysis of Casein Kinase 1 in a minimal circadian system.

van Ooijen G, Hindle M, Martin SF, Barrios-Llerena M, Sanchez F, Bouget FY, O'Neill JS, Le Bihan T, Millar AJ.

PLoS One. 2013 Jul 25;8(7):e70021. doi: 10.1371/journal.pone.0070021. Print 2013.

49.

Model selection reveals control of cold signalling by evening-phased components of the plant circadian clock.

Keily J, MacGregor DR, Smith RW, Millar AJ, Halliday KJ, Penfield S.

Plant J. 2013 Oct;76(2):247-57. doi: 10.1111/tpj.12303.

50.

Omental cyst presenting with profound anaemia.

Adikibi BT, Wood R, Pillay K, Millar AJ.

Afr J Paediatr Surg. 2013 Apr-Jun;10(2):180-4. doi: 10.4103/0189-6725.115050.

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