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Items: 25

1.

An Immortalized Genetic Mapping Population for Perennial Ryegrass: A Resource for Phenotyping and Complex Trait Mapping.

Velmurugan J, Milbourne D, Connolly V, Heslop-Harrison JS, Anhalt UCM, Lynch MB, Barth S.

Front Plant Sci. 2018 May 31;9:717. doi: 10.3389/fpls.2018.00717. eCollection 2018.

2.

Genomic prediction of crown rust resistance in Lolium perenne.

Arojju SK, Conaghan P, Barth S, Milbourne D, Casler MD, Hodkinson TR, Michel T, Byrne SL.

BMC Genet. 2018 May 29;19(1):35. doi: 10.1186/s12863-018-0613-z.

3.

Genetic mapping of quantitative trait loci for tuber-cadmium and zinc concentration in potato reveals associations with maturity and both overlapping and independent components of genetic control.

Mengist MF, Alves S, Griffin D, Creedon J, McLaughlin MJ, Jones PW, Milbourne D.

Theor Appl Genet. 2018 Apr;131(4):929-945. doi: 10.1007/s00122-017-3048-4. Epub 2018 Jan 6.

PMID:
29307117
4.

Quantitative trait loci associated with different polar metabolites in perennial ryegrass - providing scope for breeding towards increasing certain polar metabolites.

Foito A, Hackett CA, Stewart D, Velmurugan J, Milbourne D, Byrne SL, Barth S.

BMC Genet. 2017 Oct 10;18(1):84. doi: 10.1186/s12863-017-0552-0.

5.

Cadmium uptake and partitioning in potato (Solanum tuberosum L.) cultivars with different tuber-Cd concentration.

Mengist MF, Milbourne D, Griffin D, McLaughlin MJ, Creedon J, Jones PW, Alves S.

Environ Sci Pollut Res Int. 2017 Dec;24(35):27384-27391. doi: 10.1007/s11356-017-0325-3. Epub 2017 Oct 3.

PMID:
28975479
6.

Using variable importance measures to identify a small set of SNPs to predict heading date in perennial ryegrass.

Byrne SL, Conaghan P, Barth S, Arojju SK, Casler M, Michel T, Velmurugan J, Milbourne D.

Sci Rep. 2017 Jun 15;7(1):3566. doi: 10.1038/s41598-017-03232-8.

7.

Markers associated with heading and aftermath heading in perennial ryegrass full-sib families.

Arojju SK, Barth S, Milbourne D, Conaghan P, Velmurugan J, Hodkinson TR, Byrne SL.

BMC Plant Biol. 2016 Jul 16;16(1):160. doi: 10.1186/s12870-016-0844-y.

8.

An ultra-high density genetic linkage map of perennial ryegrass (Lolium perenne) using genotyping by sequencing (GBS) based on a reference shotgun genome assembly.

Velmurugan J, Mollison E, Barth S, Marshall D, Milne L, Creevey CJ, Lynch B, Meally H, McCabe M, Milbourne D.

Ann Bot. 2016 Jul;118(1):71-87. doi: 10.1093/aob/mcw081. Epub 2016 Jun 6.

9.

A disease resistance locus on potato and tomato chromosome 4 exhibits a conserved multipartite structure displaying different rates of evolution in different lineages.

Destefanis M, Nagy I, Rigney B, Bryan GJ, McLean K, Hein I, Griffin D, Milbourne D.

BMC Plant Biol. 2015 Oct 24;15:255. doi: 10.1186/s12870-015-0645-8.

10.

Construction of reference chromosome-scale pseudomolecules for potato: integrating the potato genome with genetic and physical maps.

Sharma SK, Bolser D, de Boer J, Sønderkær M, Amoros W, Carboni MF, D'Ambrosio JM, de la Cruz G, Di Genova A, Douches DS, Eguiluz M, Guo X, Guzman F, Hackett CA, Hamilton JP, Li G, Li Y, Lozano R, Maass A, Marshall D, Martinez D, McLean K, Mejía N, Milne L, Munive S, Nagy I, Ponce O, Ramirez M, Simon R, Thomson SJ, Torres Y, Waugh R, Zhang Z, Huang S, Visser RG, Bachem CW, Sagredo B, Feingold SE, Orjeda G, Veilleux RE, Bonierbale M, Jacobs JM, Milbourne D, Martin DM, Bryan GJ.

G3 (Bethesda). 2013 Nov 6;3(11):2031-47. doi: 10.1534/g3.113.007153.

11.

A hybrid next generation transcript sequencing-based approach to identify allelic and homeolog-specific single nucleotide polymorphisms in allotetraploid white clover.

Nagy I, Barth S, Mehenni-Ciz J, Abberton MT, Milbourne D.

BMC Genomics. 2013 Feb 13;14:100. doi: 10.1186/1471-2164-14-100.

12.

Genome sequence and analysis of the tuber crop potato.

Potato Genome Sequencing Consortium, Xu X, Pan S, Cheng S, Zhang B, Mu D, Ni P, Zhang G, Yang S, Li R, Wang J, Orjeda G, Guzman F, Torres M, Lozano R, Ponce O, Martinez D, De la Cruz G, Chakrabarti SK, Patil VU, Skryabin KG, Kuznetsov BB, Ravin NV, Kolganova TV, Beletsky AV, Mardanov AV, Di Genova A, Bolser DM, Martin DM, Li G, Yang Y, Kuang H, Hu Q, Xiong X, Bishop GJ, Sagredo B, Mejía N, Zagorski W, Gromadka R, Gawor J, Szczesny P, Huang S, Zhang Z, Liang C, He J, Li Y, He Y, Xu J, Zhang Y, Xie B, Du Y, Qu D, Bonierbale M, Ghislain M, Herrera Mdel R, Giuliano G, Pietrella M, Perrotta G, Facella P, O'Brien K, Feingold SE, Barreiro LE, Massa GA, Diambra L, Whitty BR, Vaillancourt B, Lin H, Massa AN, Geoffroy M, Lundback S, DellaPenna D, Buell CR, Sharma SK, Marshall DF, Waugh R, Bryan GJ, Destefanis M, Nagy I, Milbourne D, Thomson SJ, Fiers M, Jacobs JM, Nielsen KL, Sønderkær M, Iovene M, Torres GA, Jiang J, Veilleux RE, Bachem CW, de Boer J, Borm T, Kloosterman B, van Eck H, Datema E, Hekkert Bt, Goverse A, van Ham RC, Visser RG.

Nature. 2011 Jul 10;475(7355):189-95. doi: 10.1038/nature10158.

PMID:
21743474
13.

Localized hypermutation and associated gene losses in legume chloroplast genomes.

Magee AM, Aspinall S, Rice DW, Cusack BP, Sémon M, Perry AS, Stefanović S, Milbourne D, Barth S, Palmer JD, Gray JC, Kavanagh TA, Wolfe KH.

Genome Res. 2010 Dec;20(12):1700-10. doi: 10.1101/gr.111955.110. Epub 2010 Oct 26. Erratum in: Genome Res. 2014 Jun;24(6):1052.

14.

The genetic location of the self-incompatibility locus in white clover (Trifolium repens L.).

Casey NM, Milbourne D, Barth S, Febrer M, Jenkins G, Abberton MT, Jones C, Thorogood D.

Theor Appl Genet. 2010 Aug;121(3):567-76. doi: 10.1007/s00122-010-1330-9. Epub 2010 Apr 10.

PMID:
20383486
15.

Development of diagnostic markers for use in breeding potatoes resistant to Globodera pallida pathotype Pa2/3 using germplasm derived from Solanum tuberosum ssp. andigena CPC 2802.

Moloney C, Griffin D, Jones PW, Bryan GJ, McLean K, Bradshaw JE, Milbourne D.

Theor Appl Genet. 2010 Feb;120(3):679-89. doi: 10.1007/s00122-009-1185-0. Epub 2009 Nov 1.

PMID:
19882336
16.

Construction, characterization, and preliminary BAC-end sequencing analysis of a bacterial artificial chromosome library of white clover (Trifolium repens L.).

Febrer M, Cheung F, Town CD, Cannon SB, Young ND, Abberton MT, Jenkins G, Milbourne D.

Genome. 2007 Apr;50(4):412-21.

PMID:
17546099
17.

Potato in the age of biotechnology.

Mullins E, Milbourne D, Petti C, Doyle-Prestwich BM, Meade C.

Trends Plant Sci. 2006 May;11(5):254-60. Epub 2006 Apr 18. Review.

PMID:
16621672
18.

Construction of a 10,000-marker ultradense genetic recombination map of potato: providing a framework for accelerated gene isolation and a genomewide physical map.

van Os H, Andrzejewski S, Bakker E, Barrena I, Bryan GJ, Caromel B, Ghareeb B, Isidore E, de Jong W, van Koert P, Lefebvre V, Milbourne D, Ritter E, van der Voort JN, Rousselle-Bourgeois F, van Vliet J, Waugh R, Visser RG, Bakker J, van Eck HJ.

Genetics. 2006 Jun;173(2):1075-87. Epub 2006 Apr 2.

19.

Regulated expression of a novel TCP domain transcription factor indicates an involvement in the control of meristem activation processes in Solanum tuberosum.

Faivre-Rampant O, Bryan GJ, Roberts AG, Milbourne D, Viola R, Taylor MA.

J Exp Bot. 2004 Apr;55(398):951-3. Epub 2004 Feb 27.

PMID:
14990618
20.

Toward a marker-dense meiotic map of the potato genome: lessons from linkage group I.

Isidore E, van Os H, Andrzejewski S, Bakker J, Barrena I, Bryan GJ, Caromel B, van Eck H, Ghareeb B, de Jong W, van Koert P, Lefebvre V, Milbourne D, Ritter E, van der Voort JR, Rousselle-Bourgeois F, van Vliet J, Waugh R.

Genetics. 2003 Dec;165(4):2107-16.

21.

GABA(A) and opioid receptors of the central nucleus of the amygdala selectively regulate ethanol-maintained behaviors.

Foster KL, McKay PF, Seyoum R, Milbourne D, Yin W, Sarma PV, Cook JM, June HL.

Neuropsychopharmacology. 2004 Feb;29(2):269-84.

22.

Construction of a genetic linkage map in tetraploid species using molecular markers.

Luo ZW, Hackett CA, Bradshaw JE, McNicol JW, Milbourne D.

Genetics. 2001 Mar;157(3):1369-85.

23.

Computational and experimental characterization of physically clustered simple sequence repeats in plants.

Cardle L, Ramsay L, Milbourne D, Macaulay M, Marshall D, Waugh R.

Genetics. 2000 Oct;156(2):847-54.

24.

Isolation, characterisation and mapping of simple sequence repeat loci in potato.

Milbourne D, Meyer RC, Collins AJ, Ramsay LD, Gebhardt C, Waugh R.

Mol Gen Genet. 1998 Aug;259(3):233-45.

PMID:
9749666
25.

Linkage analysis in tetraploid potato and association of markers with quantitative resistance to late blight (Phytophthora infestans).

Meyer RC, Milbourne D, Hackett CA, Bradshaw JE, McNichol JW, Waugh R.

Mol Gen Genet. 1998 Aug;259(2):150-60.

PMID:
9747706

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