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Items: 1 to 50 of 156

1.

Linked-read sequencing of gametes allows efficient genome-wide analysis of meiotic recombination.

Sun H, Rowan BA, Flood PJ, Brandt R, Fuss J, Hancock AM, Michelmore RW, Huettel B, Schneeberger K.

Nat Commun. 2019 Sep 20;10(1):4310. doi: 10.1038/s41467-019-12209-2.

2.

The alternative reality of plant mitochondrial DNA: One ring does not rule them all.

Kozik A, Rowan BA, Lavelle D, Berke L, Schranz ME, Michelmore RW, Christensen AC.

PLoS Genet. 2019 Aug 30;15(8):e1008373. doi: 10.1371/journal.pgen.1008373. eCollection 2019 Aug.

3.

Correction to: The LsVe1L allele provides a molecular marker for resistance to Verticillium dahliae race 1 in lettuce.

Inderbitzin P, Christopoulou M, Lavelle D, Reyes-Chin-Wo S, Michelmore RW, Subbarao KV, Simko I.

BMC Plant Biol. 2019 Aug 26;19(1):374. doi: 10.1186/s12870-019-1966-9.

4.

Characterization of four polymorphic genes controlling red leaf colour in lettuce that have undergone disruptive selection since domestication.

Su W, Tao R, Liu W, Yu C, Yue Z, He S, Lavelle D, Zhang W, Zhang L, An G, Zhang Y, Hu Q, Larkin RM, Michelmore RW, Kuang H, Chen J.

Plant Biotechnol J. 2019 Jul 20. doi: 10.1111/pbi.13213. [Epub ahead of print]

5.

The LsVe1L allele provides a molecular marker for resistance to Verticillium dahliae race 1 in lettuce.

Inderbitzin P, Christopoulou M, Lavelle D, Reyes-Chin-Wo S, Michelmore RW, Subbarao KV, Simko I.

BMC Plant Biol. 2019 Jul 10;19(1):305. doi: 10.1186/s12870-019-1905-9. Erratum in: BMC Plant Biol. 2019 Aug 26;19(1):374.

6.

Genomic signatures of heterokaryosis in the oomycete pathogen Bremia lactucae.

Fletcher K, Gil J, Bertier LD, Kenefick A, Wood KJ, Zhang L, Reyes-Chin-Wo S, Cavanaugh K, Tsuchida C, Wong J, Michelmore R.

Nat Commun. 2019 Jun 14;10(1):2645. doi: 10.1038/s41467-019-10550-0.

7.

The genetics of resistance to lettuce drop (Sclerotinia spp.) in lettuce in a recombinant inbred line population from Reine des Glaces × Eruption.

Mamo BE, Hayes RJ, Truco MJ, Puri KD, Michelmore RW, Subbarao KV, Simko I.

Theor Appl Genet. 2019 Aug;132(8):2439-2460. doi: 10.1007/s00122-019-03365-6. Epub 2019 Jun 4.

PMID:
31165222
8.

Genetic architecture of tipburn resistance in lettuce.

Macias-González M, Truco MJ, Bertier LD, Jenni S, Simko I, Hayes RJ, Michelmore RW.

Theor Appl Genet. 2019 Aug;132(8):2209-2222. doi: 10.1007/s00122-019-03349-6. Epub 2019 May 4.

PMID:
31055612
9.

The genome sequence of segmental allotetraploid peanut Arachis hypogaea.

Bertioli DJ, Jenkins J, Clevenger J, Dudchenko O, Gao D, Seijo G, Leal-Bertioli SCM, Ren L, Farmer AD, Pandey MK, Samoluk SS, Abernathy B, Agarwal G, Ballén-Taborda C, Cameron C, Campbell J, Chavarro C, Chitikineni A, Chu Y, Dash S, El Baidouri M, Guo B, Huang W, Kim KD, Korani W, Lanciano S, Lui CG, Mirouze M, Moretzsohn MC, Pham M, Shin JH, Shirasawa K, Sinharoy S, Sreedasyam A, Weeks NT, Zhang X, Zheng Z, Sun Z, Froenicke L, Aiden EL, Michelmore R, Varshney RK, Holbrook CC, Cannon EKS, Scheffler BE, Grimwood J, Ozias-Akins P, Cannon SB, Jackson SA, Schmutz J.

Nat Genet. 2019 May;51(5):877-884. doi: 10.1038/s41588-019-0405-z. Epub 2019 May 1.

PMID:
31043755
10.

Genome-wide functional analyses of plant coiled-coil NLR-type pathogen receptors reveal essential roles of their N-terminal domain in oligomerization, networking, and immunity.

Wróblewski T, Spiridon L, Martin EC, Petrescu AJ, Cavanaugh K, Truco MJ, Xu H, Gozdowski D, Pawłowski K, Michelmore RW, Takken FLW.

PLoS Biol. 2018 Dec 12;16(12):e2005821. doi: 10.1371/journal.pbio.2005821. eCollection 2018 Dec.

11.

Comparative genomics of downy mildews reveals potential adaptations to biotrophy.

Fletcher K, Klosterman SJ, Derevnina L, Martin F, Bertier LD, Koike S, Reyes-Chin-Wo S, Mou B, Michelmore R.

BMC Genomics. 2018 Nov 29;19(1):851. doi: 10.1186/s12864-018-5214-8.

12.

Integrated QTL and eQTL Mapping Provides Insights and Candidate Genes for Fatty Acid Composition, Flowering Time, and Growth Traits in a F2 Population of a Novel Synthetic Allopolyploid Brassica napus.

Li R, Jeong K, Davis JT, Kim S, Lee S, Michelmore RW, Kim S, Maloof JN.

Front Plant Sci. 2018 Nov 13;9:1632. doi: 10.3389/fpls.2018.01632. eCollection 2018.

13.

From Short Reads to Chromosome-Scale Genome Assemblies.

Fletcher K, Michelmore R.

Methods Mol Biol. 2018;1848:151-197. doi: 10.1007/978-1-4939-8724-5_13.

PMID:
30182236
14.

Metabolic Reprogramming in Leaf Lettuce Grown Under Different Light Quality and Intensity Conditions Using Narrow-Band LEDs.

Kitazaki K, Fukushima A, Nakabayashi R, Okazaki Y, Kobayashi M, Mori T, Nishizawa T, Reyes-Chin-Wo S, Michelmore RW, Saito K, Shoji K, Kusano M.

Sci Rep. 2018 May 21;8(1):7914. doi: 10.1038/s41598-018-25686-0.

15.

Molecular markers reliably predict post-harvest deterioration of fresh-cut lettuce in modified atmosphere packaging.

Simko I, Hayes RJ, Truco MJ, Michelmore RW, Antonise R, Massoudi M.

Hortic Res. 2018 Apr 1;5:21. doi: 10.1038/s41438-018-0022-5. eCollection 2018.

16.

High-Resolution Analysis of the Efficiency, Heritability, and Editing Outcomes of CRISPR/Cas9-Induced Modifications of NCED4 in Lettuce (Lactuca sativa).

Bertier LD, Ron M, Huo H, Bradford KJ, Britt AB, Michelmore RW.

G3 (Bethesda). 2018 May 4;8(5):1513-1521. doi: 10.1534/g3.117.300396.

17.

RNA sequencing provides insights into the evolution of lettuce and the regulation of flavonoid biosynthesis.

Zhang L, Su W, Tao R, Zhang W, Chen J, Wu P, Yan C, Jia Y, Larkin RM, Lavelle D, Truco MJ, Chin-Wo SR, Michelmore RW, Kuang H.

Nat Commun. 2017 Dec 22;8(1):2264. doi: 10.1038/s41467-017-02445-9.

18.

Genome assembly with in vitro proximity ligation data and whole-genome triplication in lettuce.

Reyes-Chin-Wo S, Wang Z, Yang X, Kozik A, Arikit S, Song C, Xia L, Froenicke L, Lavelle DO, Truco MJ, Xia R, Zhu S, Xu C, Xu H, Xu X, Cox K, Korf I, Meyers BC, Michelmore RW.

Nat Commun. 2017 Apr 12;8:14953. doi: 10.1038/ncomms14953.

19.

Foundational and Translational Research Opportunities to Improve Plant Health.

Michelmore R, Coaker G, Bart R, Beattie G, Bent A, Bruce T, Cameron D, Dangl J, Dinesh-Kumar S, Edwards R, Eves-van den Akker S, Gassmann W, Greenberg JT, Hanley-Bowdoin L, Harrison RJ, Harvey J, He P, Huffaker A, Hulbert S, Innes R, Jones JDG, Kaloshian I, Kamoun S, Katagiri F, Leach J, Ma W, McDowell J, Medford J, Meyers B, Nelson R, Oliver R, Qi Y, Saunders D, Shaw M, Smart C, Subudhi P, Torrance L, Tyler B, Valent B, Walsh J.

Mol Plant Microbe Interact. 2017 Jul;30(7):515-516. doi: 10.1094/MPMI-01-17-0010-CR. Epub 2017 Jun 12.

20.

Detection and Quantification of Bremia lactucae by Spore Trapping and Quantitative PCR.

Kunjeti SG, Anchieta A, Martin FN, Choi YJ, Thines M, Michelmore RW, Koike ST, Tsuchida C, Mahaffee W, Subbarao KV, Klosterman SJ.

Phytopathology. 2016 Nov;106(11):1426-1437. Epub 2016 Aug 29.

21.

Corrigendum: The genome sequence of the outbreeding globe artichoke constructed de novo incorporating a phase-aware low-pass sequencing strategy of F1 progeny.

Scaglione D, Reyes-Chin-Wo S, Acquadro A, Froenicke L, Portis E, Beitel C, Tirone M, Mauro R, Lo Monaco A, Mauromicale G, Faccioli P, Cattivelli L, Rieseberg L, Michelmore R, Lanteri S.

Sci Rep. 2016 May 23;6:25323. doi: 10.1038/srep25323. No abstract available.

22.

The genome sequences of Arachis duranensis and Arachis ipaensis, the diploid ancestors of cultivated peanut.

Bertioli DJ, Cannon SB, Froenicke L, Huang G, Farmer AD, Cannon EK, Liu X, Gao D, Clevenger J, Dash S, Ren L, Moretzsohn MC, Shirasawa K, Huang W, Vidigal B, Abernathy B, Chu Y, Niederhuth CE, Umale P, Araújo AC, Kozik A, Kim KD, Burow MD, Varshney RK, Wang X, Zhang X, Barkley N, Guimarães PM, Isobe S, Guo B, Liao B, Stalker HT, Schmitz RJ, Scheffler BE, Leal-Bertioli SC, Xun X, Jackson SA, Michelmore R, Ozias-Akins P.

Nat Genet. 2016 Apr;48(4):438-46. doi: 10.1038/ng.3517. Epub 2016 Feb 22.

PMID:
26901068
23.

The genome sequence of the outbreeding globe artichoke constructed de novo incorporating a phase-aware low-pass sequencing strategy of F1 progeny.

Scaglione D, Reyes-Chin-Wo S, Acquadro A, Froenicke L, Portis E, Beitel C, Tirone M, Mauro R, Lo Monaco A, Mauromicale G, Faccioli P, Cattivelli L, Rieseberg L, Michelmore R, Lanteri S.

Sci Rep. 2016 Jan 20;6:19427. doi: 10.1038/srep19427. Erratum in: Sci Rep. 2016 May 23;6:25323.

24.

Elucidating the genetic basis of antioxidant status in lettuce (Lactuca sativa).

Damerum A, Selmes SL, Biggi GF, Clarkson GJ, Rothwell SD, Truco MJ, Michelmore RW, Hancock RD, Shellcock C, Chapman MA, Taylor G.

Hortic Res. 2015 Nov 25;2:15055. doi: 10.1038/hortres.2015.55. eCollection 2015.

25.

Perception of bitterness, sweetness and liking of different genotypes of lettuce.

Chadwick M, Gawthrop F, Michelmore RW, Wagstaff C, Methven L.

Food Chem. 2016 Apr 15;197(Pt A):66-74. doi: 10.1016/j.foodchem.2015.10.105. Epub 2015 Oct 23.

PMID:
26616925
26.

Acetylation of an NB-LRR Plant Immune-Effector Complex Suppresses Immunity.

Lee J, Manning AJ, Wolfgeher D, Jelenska J, Cavanaugh KA, Xu H, Fernandez SM, Michelmore RW, Kron SJ, Greenberg JT.

Cell Rep. 2015 Nov 24;13(8):1670-82. doi: 10.1016/j.celrep.2015.10.029. Epub 2015 Nov 12.

27.

Genetic Variation for Thermotolerance in Lettuce Seed Germination Is Associated with Temperature-Sensitive Regulation of ETHYLENE RESPONSE FACTOR1 (ERF1).

Yoong FY, O'Brien LK, Truco MJ, Huo H, Sideman R, Hayes R, Michelmore RW, Bradford KJ.

Plant Physiol. 2016 Jan;170(1):472-88. doi: 10.1104/pp.15.01251. Epub 2015 Nov 16.

28.

Genome-Wide Architecture of Disease Resistance Genes in Lettuce.

Christopoulou M, Wo SR, Kozik A, McHale LK, Truco MJ, Wroblewski T, Michelmore RW.

G3 (Bethesda). 2015 Oct 8;5(12):2655-69. doi: 10.1534/g3.115.020818. Erratum in: G3 (Bethesda). 2016 Mar;6(3):773.

29.

Ultra-High Density, Transcript-Based Genetic Maps of Pepper Define Recombination in the Genome and Synteny Among Related Species.

Hill T, Ashrafi H, Chin-Wo SR, Stoffel K, Truco MJ, Kozik A, Michelmore R, Van Deynze A.

G3 (Bethesda). 2015 Sep 8;5(11):2341-55. doi: 10.1534/g3.115.020040.

30.

Genome Sequence and Architecture of the Tobacco Downy Mildew Pathogen Peronospora tabacina.

Derevnina L, Chin-Wo-Reyes S, Martin F, Wood K, Froenicke L, Spring O, Michelmore R.

Mol Plant Microbe Interact. 2015 Nov;28(11):1198-215. doi: 10.1094/MPMI-05-15-0112-R. Epub 2015 Nov 9.

31.

Resistance to Downy Mildew in Lettuce 'La Brillante' is Conferred by Dm50 Gene and Multiple QTL.

Simko I, Ochoa OE, Pel MA, Tsuchida C, Font I Forcada C, Hayes RJ, Truco MJ, Antonise R, Galeano CH, Michelmore RW.

Phytopathology. 2015 Sep;105(9):1220-8. doi: 10.1094/PHYTO-02-15-0057-R. Epub 2015 Aug 24.

32.

Wheat rusts never sleep but neither do sequencers: will pathogenomics transform the way plant diseases are managed?

Derevnina L, Michelmore RW.

Genome Biol. 2015 Mar 2;16:44. doi: 10.1186/s13059-015-0615-3.

33.

Dissection of Two Complex Clusters of Resistance Genes in Lettuce (Lactuca sativa).

Christopoulou M, McHale LK, Kozik A, Reyes-Chin Wo S, Wroblewski T, Michelmore RW.

Mol Plant Microbe Interact. 2015 Jul;28(7):751-65. doi: 10.1094/MPMI-06-14-0175-R. Epub 2015 Jul 9.

34.

Host-induced gene silencing inhibits the biotrophic pathogen causing downy mildew of lettuce.

Govindarajulu M, Epstein L, Wroblewski T, Michelmore RW.

Plant Biotechnol J. 2015 Sep;13(7):875-83. doi: 10.1111/pbi.12307. Epub 2014 Dec 9.

35.

Abiotic stress QTL in lettuce crop-wild hybrids: comparing greenhouse and field experiments.

Hartman Y, Hooftman DA, Uwimana B, Schranz ME, van de Wiel CC, Smulders MJ, Visser RG, Michelmore RW, van Tienderen PH.

Ecol Evol. 2014 Jun;4(12):2395-409. doi: 10.1002/ece3.1060. Epub 2014 May 17.

36.

Distinctive profiles of small RNA couple inverted repeat-induced post-transcriptional gene silencing with endogenous RNA silencing pathways in Arabidopsis.

Wroblewski T, Matvienko M, Piskurewicz U, Xu H, Martineau B, Wong J, Govindarajulu M, Kozik A, Michelmore RW.

RNA. 2014 Dec;20(12):1987-99. doi: 10.1261/rna.046532.114. Epub 2014 Oct 24.

37.

A target enrichment method for gathering phylogenetic information from hundreds of loci: An example from the Compositae.

Mandel JR, Dikow RB, Funk VA, Masalia RR, Staton SE, Kozik A, Michelmore RW, Rieseberg LH, Burke JM.

Appl Plant Sci. 2014 Feb 6;2(2). pii: apps.1300085. doi: 10.3732/apps.1300085. eCollection 2014 Feb.

38.

RNAseq analysis of cassava reveals similar plant responses upon infection with pathogenic and non-pathogenic strains of Xanthomonas axonopodis pv. manihotis.

Muñoz-Bodnar A, Perez-Quintero AL, Gomez-Cano F, Gil J, Michelmore R, Bernal A, Szurek B, Lopez C.

Plant Cell Rep. 2014 Nov;33(11):1901-12. doi: 10.1007/s00299-014-1667-7. Epub 2014 Aug 15.

PMID:
25120000
39.

Strain- and plasmid-level deconvolution of a synthetic metagenome by sequencing proximity ligation products.

Beitel CW, Froenicke L, Lang JM, Korf IF, Michelmore RW, Eisen JA, Darling AE.

PeerJ. 2014 May 27;2:e415. doi: 10.7717/peerj.415. eCollection 2014.

40.

Genetic analysis of safflower domestication.

Pearl SA, Bowers JE, Reyes-Chin-Wo S, Michelmore RW, Burke JM.

BMC Plant Biol. 2014 Feb 6;14:43. doi: 10.1186/1471-2229-14-43.

41.

The inheritance of resistance to bacterial leaf spot of lettuce caused by Xanthomonas campestris pv. vitians in three lettuce cultivars.

Hayes RJ, Trent MA, Truco MJ, Antonise R, Michelmore RW, Bull CT.

Hortic Res. 2014 Dec 24;1:14066. doi: 10.1038/hortres.2014.66. eCollection 2014.

42.

Genomics of Compositae crops: reference transcriptome assemblies and evidence of hybridization with wild relatives.

Hodgins KA, Lai Z, Oliveira LO, Still DW, Scascitelli M, Barker MS, Kane NC, Dempewolf H, Kozik A, Kesseli RV, Burke JM, Michelmore RW, Rieseberg LH.

Mol Ecol Resour. 2014 Jan;14(1):166-77. doi: 10.1111/1755-0998.12163. Epub 2013 Sep 18.

PMID:
24103297
43.

Identification of QTLs conferring resistance to downy mildew in legacy cultivars of lettuce.

Simko I, Atallah AJ, Ochoa OE, Antonise R, Galeano CH, Truco MJ, Michelmore RW.

Sci Rep. 2013 Oct 7;3:2875. doi: 10.1038/srep02875.

44.

Quantitative trait loci associated with tipburn, heat stress-induced physiological disorders, and maturity traits in crisphead lettuce.

Jenni S, Truco MJ, Michelmore RW.

Theor Appl Genet. 2013 Sep 28. [Epub ahead of print]

PMID:
24078012
45.

An intra-specific linkage map of lettuce (Lactuca sativa) and genetic analysis of postharvest discolouration traits.

Atkinson LD, McHale LK, Truco MJ, Hilton HW, Lynn J, Schut JW, Michelmore RW, Hand P, Pink DA.

Theor Appl Genet. 2013 Nov;126(11):2737-52.

PMID:
23959526
46.

The role of TIR-NBS and TIR-X proteins in plant basal defense responses.

Nandety RS, Caplan JL, Cavanaugh K, Perroud B, Wroblewski T, Michelmore RW, Meyers BC.

Plant Physiol. 2013 Jul;162(3):1459-72. doi: 10.1104/pp.113.219162. Epub 2013 Jun 4.

47.

Impacts of resistance gene genetics, function, and evolution on a durable future.

Michelmore RW, Christopoulou M, Caldwell KS.

Annu Rev Phytopathol. 2013;51:291-319. doi: 10.1146/annurev-phyto-082712-102334. Epub 2013 May 15. Review.

PMID:
23682913
48.

An Ultra-High-Density, Transcript-Based, Genetic Map of Lettuce.

Truco MJ, Ashrafi H, Kozik A, van Leeuwen H, Bowers J, Wo SR, Stoffel K, Xu H, Hill T, Van Deynze A, Michelmore RW.

G3 (Bethesda). 2013 Apr 9;3(4):617-631. doi: 10.1534/g3.112.004929.

49.

RNAseq-based transcriptome analysis of Lactuca sativa infected by the fungal necrotroph Botrytis cinerea.

De Cremer K, Mathys J, Vos C, Froenicke L, Michelmore RW, Cammue BP, De Coninck B.

Plant Cell Environ. 2013 Nov;36(11):1992-2007. doi: 10.1111/pce.12106. Epub 2013 Apr 26.

50.

Characterization of Capsicum annuum genetic diversity and population structure based on parallel polymorphism discovery with a 30K unigene Pepper GeneChip.

Hill TA, Ashrafi H, Reyes-Chin-Wo S, Yao J, Stoffel K, Truco MJ, Kozik A, Michelmore RW, Van Deynze A.

PLoS One. 2013;8(2):e56200. doi: 10.1371/journal.pone.0056200. Epub 2013 Feb 8.

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