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Items: 1 to 50 of 304

1.

Immunopeptidomics of colorectal cancer organoids reveals a sparse HLA class I neoantigen landscape and no increase in neoantigens with interferon or MEK-inhibitor treatment.

Newey A, Griffiths B, Michaux J, Pak HS, Stevenson BJ, Woolston A, Semiannikova M, Spain G, Barber LJ, Matthews N, Rao S, Watkins D, Chau I, Coukos G, Racle J, Gfeller D, Starling N, Cunningham D, Bassani-Sternberg M, Gerlinger M.

J Immunother Cancer. 2019 Nov 18;7(1):309. doi: 10.1186/s40425-019-0769-8.

2.

Robust prediction of HLA class II epitopes by deep motif deconvolution of immunopeptidomes.

Racle J, Michaux J, Rockinger GA, Arnaud M, Bobisse S, Chong C, Guillaume P, Coukos G, Harari A, Jandus C, Bassani-Sternberg M, Gfeller D.

Nat Biotechnol. 2019 Nov;37(11):1283-1286. doi: 10.1038/s41587-019-0289-6. Epub 2019 Oct 14.

PMID:
31611696
3.

A Phase Ib Study of the Combination of Personalized Autologous Dendritic Cell Vaccine, Aspirin, and Standard of Care Adjuvant Chemotherapy Followed by Nivolumab for Resected Pancreatic Adenocarcinoma-A Proof of Antigen Discovery Feasibility in Three Patients.

Bassani-Sternberg M, Digklia A, Huber F, Wagner D, Sempoux C, Stevenson BJ, Thierry AC, Michaux J, Pak H, Racle J, Boudousquie C, Balint K, Coukos G, Gfeller D, Martin Lluesma S, Harari A, Demartines N, Kandalaft LE.

Front Immunol. 2019 Aug 8;10:1832. doi: 10.3389/fimmu.2019.01832. eCollection 2019.

4.

The menu varies with metabarcoding practices: A case study with the bat Plecotus auritus.

Andriollo T, Gillet F, Michaux JR, Ruedi M.

PLoS One. 2019 Jul 5;14(7):e0219135. doi: 10.1371/journal.pone.0219135. eCollection 2019.

5.

Health and zoonotic Infections of snow leopards Panthera unica in the South Gobi desert of Mongolia.

Esson C, Skerratt LF, Berger L, Malmsten J, Strand T, Lundkvist Å, Järhult JD, Michaux J, Mijiddorj TN, Bayrakçısmith R, Mishra C, Johansson Ö.

Infect Ecol Epidemiol. 2019 Jun 5;9(1):1604063. doi: 10.1080/20008686.2019.1604063. eCollection 2019.

6.

Mass spectrometry driven exploration reveals nuances of neoepitope-driven tumor rejection.

Ebrahimi-Nik H, Michaux J, Corwin WL, Keller GL, Shcheglova T, Pak H, Coukos G, Baker BM, Mandoiu II, Bassani-Sternberg M, Srivastava PK.

JCI Insight. 2019 Jun 20;5. pii: 129152. doi: 10.1172/jci.insight.129152.

7.

High-Throughput, Fast, and Sensitive Immunopeptidomics Sample Processing for Mass Spectrometry.

Marino F, Chong C, Michaux J, Bassani-Sternberg M.

Methods Mol Biol. 2019;1913:67-79. doi: 10.1007/978-1-4939-8979-9_5.

PMID:
30666599
8.

The Length Distribution and Multiple Specificity of Naturally Presented HLA-I Ligands.

Gfeller D, Guillaume P, Michaux J, Pak HS, Daniel RT, Racle J, Coukos G, Bassani-Sternberg M.

J Immunol. 2018 Dec 15;201(12):3705-3716. doi: 10.4049/jimmunol.1800914. Epub 2018 Nov 14.

PMID:
30429286
9.

A genome-wide data assessment of the African lion (Panthera leo) population genetic structure and diversity in Tanzania.

Smitz N, Jouvenet O, Ambwene Ligate F, Crosmary WG, Ikanda D, Chardonnet P, Fusari A, Meganck K, Gillet F, Melletti M, Michaux JR.

PLoS One. 2018 Nov 7;13(11):e0205395. doi: 10.1371/journal.pone.0205395. eCollection 2018.

10.

Excitable RhoA dynamics drive pulsed contractions in the early C. elegans embryo.

Michaux JB, Robin FB, McFadden WM, Munro EM.

J Cell Biol. 2018 Dec 3;217(12):4230-4252. doi: 10.1083/jcb.201806161. Epub 2018 Oct 1.

11.

Evolutionary journey of the retroviral restriction gene Fv1.

Young GR, Yap MW, Michaux JR, Steppan SJ, Stoye JP.

Proc Natl Acad Sci U S A. 2018 Oct 2;115(40):10130-10135. doi: 10.1073/pnas.1808516115. Epub 2018 Sep 17.

12.

Severe parasitism by Versteria mustelae (Gmelin, 1790) in the critically endangered European mink Mustela lutreola (Linnaeus, 1761) in Spain.

Fournier-Chambrillon C, Torres J, Miquel J, André A, Michaux J, Lemberger K, Carrera GG, Fournier P.

Parasitol Res. 2018 Oct;117(10):3347-3350. doi: 10.1007/s00436-018-6043-z. Epub 2018 Sep 4.

13.

Liver microbiome of Peromyscus leucopus, a key reservoir host species for emerging infectious diseases in North America.

André A, Mouton A, Millien V, Michaux J.

Infect Genet Evol. 2017 Aug;52:10-18. doi: 10.1016/j.meegid.2017.04.011. Epub 2017 Apr 13.

PMID:
28412525
14.

Correction: What Do Pneumocystis Organisms Tell Us about the Phylogeography of Their Hosts? The Case of the Woodmouse Apodemus sylvaticus in Continental Europe and Western Mediterranean Islands.

Demanche C, Deville M, Michaux J, Barriel V, Pinçon C, Aliouat-Denis CM, Pottier M, Noël C, Viscogliosi E, Aliouat EM, Dei-Cas E, Morand S, Guillot J.

PLoS One. 2017 Feb 9;12(2):e0171282. doi: 10.1371/journal.pone.0171282. eCollection 2017.

15.

High gene flow between alternative morphs and the evolutionary persistence of facultative paedomorphosis.

Oromi N, Michaux J, Denoël M.

Sci Rep. 2016 Aug 18;6:32046. doi: 10.1038/srep32046.

16.

Endogenous Gibbon Ape Leukemia Virus Identified in a Rodent (Melomys burtoni subsp.) from Wallacea (Indonesia).

Alfano N, Michaux J, Morand S, Aplin K, Tsangaras K, Löber U, Fabre PH, Fitriana Y, Semiadi G, Ishida Y, Helgen KM, Roca AL, Eiden MV, Greenwood AD.

J Virol. 2016 Aug 26;90(18):8169-80. doi: 10.1128/JVI.00723-16. Print 2016 Sep 15.

17.

Erratum to: genetic structure of fragmented southern populations of African Cape buffalo (Syncerus caffer caffer).

Smitz N, Cornélis D, Chardonnet P, Caron A, de Garine-Wichatitsky M, Jori F, Mouton A, Latinne A, Pigneur LM, Melletti M, Kanapeckas KL, Marescaux J, Pereira CL, Michaux J.

BMC Evol Biol. 2016 Jan 20;16:17. doi: 10.1186/s12862-016-0585-4. No abstract available.

18.

Alphacoronaviruses Detected in French Bats Are Phylogeographically Linked to Coronaviruses of European Bats.

Goffard A, Demanche C, Arthur L, Pinçon C, Michaux J, Dubuisson J.

Viruses. 2015 Dec 2;7(12):6279-90. doi: 10.3390/v7122937.

19.

Genetic variations of Turkish bank vole, Myodes glareolus (Mammalia: Rodentia) inferred from mtDNA.

Çolak R, Olgun Karacan G, Kandemir I, Çolak E, Kankiliç T, Yigit N, Michaux J.

Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Nov;27(6):4372-4379. Epub 2015 Nov 5.

20.

Endogenous murine leukemia retroviral variation across wild European and inbred strains of house mouse.

Hartmann S, Hasenkamp N, Mayer J, Michaux J, Morand S, Mazzoni CJ, Roca AL, Greenwood AD.

BMC Genomics. 2015 Aug 18;16:613. doi: 10.1186/s12864-015-1766-z.

21.

Patterns of genetic variation in the endangered European mink (Mustela lutreola L., 1761).

Cabria MT, Gonzalez EG, Gomez-Moliner BJ, Michaux JR, Skumatov D, Kranz A, Fournier P, Palazon S, Zardoya R.

BMC Evol Biol. 2015 Jul 17;15:141. doi: 10.1186/s12862-015-0427-9.

22.

Global parasite and Rattus rodent invasions: The consequences for rodent-borne diseases.

Morand S, Bordes F, Chen HW, Claude J, Cosson JF, Galan M, Czirják GÁ, Greenwood AD, Latinne A, Michaux J, Ribas A.

Integr Zool. 2015 Sep;10(5):409-23. doi: 10.1111/1749-4877.12143. Review.

23.

What do Pneumocystis organisms tell us about the phylogeography of their hosts? The case of the woodmouse Apodemus sylvaticus in continental Europe and western Mediterranean islands.

Demanche C, Deville M, Michaux J, Barriel V, Pinçon C, Aliouat-Denis CM, Pottier M, Noël C, Viscogliosi E, Aliouat el M, Dei-Cas E, Morand S, Guillot J.

PLoS One. 2015 Apr 1;10(4):e0120839. doi: 10.1371/journal.pone.0120839. eCollection 2015. Erratum in: PLoS One. 2017 Feb 9;12 (2):e0171282.

24.

[Béla Bartók's disease: a hidden leukemia, a defeated leukemia].

Michaux JL.

Bull Acad Natl Med. 2015 Apr-May;199(4-5):717-28. French.

PMID:
27509687
25.

Genetic structure of fragmented southern populations of African Cape buffalo (Syncerus caffer caffer).

Smitz N, Cornélis D, Chardonnet P, Caron A, de Garine-Wichatitsky M, Jori F, Mouton A, Latinne A, Pigneur LM, Melletti M, Kanapeckas KL, Marescaux J, Pereira CL, Michaux J.

BMC Evol Biol. 2014 Nov 1;14:203. doi: 10.1186/s12862-014-0203-2. Erratum in: BMC Evol Biol. 2016;16:17.

26.

Hybridization capture using short PCR products enriches small genomes by capturing flanking sequences (CapFlank).

Tsangaras K, Wales N, Sicheritz-Pontén T, Rasmussen S, Michaux J, Ishida Y, Morand S, Kampmann ML, Gilbert MT, Greenwood AD.

PLoS One. 2014 Oct 2;9(10):e109101. doi: 10.1371/journal.pone.0109101. eCollection 2014.

27.

Nuclear and mitochondrial genetic structure in the Eurasian beaver (Castor fiber) - implications for future reintroductions.

Senn H, Ogden R, Frosch C, Syrůčková A, Campbell-Palmer R, Munclinger P, Durka W, Kraus RH, Saveljev AP, Nowak C, Stubbe A, Stubbe M, Michaux J, Lavrov V, Samiya R, Ulevicius A, Rosell F.

Evol Appl. 2014 Jun;7(6):645-62. doi: 10.1111/eva.12162. Epub 2014 Jun 17.

28.

Negative purifying selection drives prion and doppel protein evolution.

Tsangaras K, Kolokotronis SO, Ulrich RG, Morand S, Michaux J, Greenwood AD.

J Mol Evol. 2014 Aug;79(1-2):12-20. doi: 10.1007/s00239-014-9632-1. Epub 2014 Jul 20.

29.

Postglacial climate changes and rise of three ecotypes of harbour porpoises, Phocoena phocoena, in western Palearctic waters.

Fontaine MC, Roland K, Calves I, Austerlitz F, Palstra FP, Tolley KA, Ryan S, Ferreira M, Jauniaux T, Llavona A, Öztürk B, Öztürk AA, Ridoux V, Rogan E, Sequeira M, Siebert U, Vikingsson GA, Borrell A, Michaux JR, Aguilar A.

Mol Ecol. 2014 Jul;23(13):3306-21. doi: 10.1111/mec.12817. Epub 2014 Jun 19.

30.

The genetic legacy of multiple beaver reintroductions in Central Europe.

Frosch C, Kraus RH, Angst C, Allgöwer R, Michaux J, Teubner J, Nowak C.

PLoS One. 2014 May 14;9(5):e97619. doi: 10.1371/journal.pone.0097619. eCollection 2014.

31.

HIV-1 DIS stem loop forms an obligatory bent kissing intermediate in the dimerization pathway.

Mundigala H, Michaux JB, Feig AL, Ennifar E, Rueda D.

Nucleic Acids Res. 2014 Jun;42(11):7281-9. doi: 10.1093/nar/gku332. Epub 2014 May 9.

32.

Phylogeography analysis and molecular evolution patterns of the nematode parasite Heligmosomum mixtum based on mitochondrial DNA sequences.

Sakka H, Henttonen H, Baraket G, Amel SH, Michaux J.

Acta Parasitol. 2014 Mar;60(1):85-98. doi: 10.1515/ap-2015-0011.

33.

Roles of dental development and adaptation in rodent evolution.

Rodrigues HG, Renaud S, Charles C, Le Poul Y, Solé F, Aguilar JP, Michaux J, Tafforeau P, Headon D, Jernvall J, Viriot L.

Nat Commun. 2013;4:2504. doi: 10.1038/ncomms3504.

PMID:
24051719
34.

Pan-African genetic structure in the African buffalo (Syncerus caffer): investigating intraspecific divergence.

Smitz N, Berthouly C, Cornélis D, Heller R, Van Hooft P, Chardonnet P, Caron A, Prins H, van Vuuren BJ, De Iongh H, Michaux J.

PLoS One. 2013;8(2):e56235. doi: 10.1371/journal.pone.0056235. Epub 2013 Feb 21.

35.

Cytonuclear discordance among Southeast Asian black rats (Rattus rattus complex).

Pagès M, Bazin E, Galan M, Chaval Y, Claude J, Herbreteau V, Michaux J, Piry S, Morand S, Cosson JF.

Mol Ecol. 2013 Feb;22(4):1019-34. doi: 10.1111/mec.12149. Epub 2012 Dec 24.

PMID:
23278980
36.

Is Leopoldamys neilli (Rodentia, Muridae) a synonym of Leopoldamys herberti? A reply to Balakirev et al. (2013).

Latinne A, Chaval Y, Waengsothorn S, Rojanadilok P, Eiamampai K, Sribuarod K, Herbreteau V, Morand S, Michaux JR.

Zootaxa. 2013 Nov 1;3731:589-98. doi: 10.11646/zootaxa.3731.4.10.

PMID:
25277593
37.

Combined mitochondrial and nuclear markers revealed a deep vicariant history for Leopoldamys neilli, a cave-dwelling rodent of Thailand.

Latinne A, Waengsothorn S, Rojanadilok P, Eiamampai K, Sribuarod K, Michaux JR.

PLoS One. 2012;7(10):e47670. doi: 10.1371/journal.pone.0047670. Epub 2012 Oct 31.

38.

Discovery of CX-5461, the First Direct and Selective Inhibitor of RNA Polymerase I, for Cancer Therapeutics.

Haddach M, Schwaebe MK, Michaux J, Nagasawa J, O'Brien SE, Whitten JP, Pierre F, Kerdoncuff P, Darjania L, Stansfield R, Drygin D, Anderes K, Proffitt C, Bliesath J, Siddiqui-Jain A, Omori M, Huser N, Rice WG, Ryckman DM.

ACS Med Chem Lett. 2012 May 8;3(7):602-6. doi: 10.1021/ml300110s. eCollection 2012 Jul 12.

39.

A unifying model for the analysis of phenotypic, genetic, and geographic data.

Guillot G, Renaud S, Ledevin R, Michaux J, Claude J.

Syst Biol. 2012 Dec 1;61(6):897-911. doi: 10.1093/sysbio/sys038. Epub 2012 Mar 6.

40.

Paleogenetic analyses reveal unsuspected phylogenetic affinities between mice and the extinct Malpaisomys insularis, an endemic rodent of the Canaries.

Pagès M, Chevret P, Gros-Balthazard M, Hughes S, Alcover JA, Hutterer R, Rando JC, Michaux J, Hänni C.

PLoS One. 2012;7(2):e31123. doi: 10.1371/journal.pone.0031123. Epub 2012 Feb 21.

41.

Discovery of CX-6258. A Potent, Selective, and Orally Efficacious pan-Pim Kinases Inhibitor.

Haddach M, Michaux J, Schwaebe MK, Pierre F, O'Brien SE, Borsan C, Tran J, Raffaele N, Ravula S, Drygin D, Siddiqui-Jain A, Darjania L, Stansfield R, Proffitt C, Macalino D, Streiner N, Bliesath J, Omori M, Whitten JP, Anderes K, Rice WG, Ryckman DM.

ACS Med Chem Lett. 2011 Dec 27;3(2):135-9. doi: 10.1021/ml200259q. eCollection 2012 Feb 9.

42.

Synthesis and SAR of inhibitors of protein kinase CK2: novel tricyclic quinoline analogs.

Haddach M, Pierre F, Regan CF, Borsan C, Michaux J, Stefan E, Kerdoncuff P, Schwaebe MK, Chua PC, Siddiqui-Jain A, Macalino D, Drygin D, O'Brien SE, Rice WG, Ryckman DM.

Bioorg Med Chem Lett. 2012 Jan 1;22(1):45-8. doi: 10.1016/j.bmcl.2011.11.087. Epub 2011 Nov 30.

PMID:
22169261
43.

Pre-clinical characterization of CX-4945, a potent and selective small molecule inhibitor of CK2 for the treatment of cancer.

Pierre F, Chua PC, O'Brien SE, Siddiqui-Jain A, Bourbon P, Haddach M, Michaux J, Nagasawa J, Schwaebe MK, Stefan E, Vialettes A, Whitten JP, Chen TK, Darjania L, Stansfield R, Bliesath J, Drygin D, Ho C, Omori M, Proffitt C, Streiner N, Rice WG, Ryckman DM, Anderes K.

Mol Cell Biochem. 2011 Oct;356(1-2):37-43. doi: 10.1007/s11010-011-0956-5. Epub 2011 Jul 14.

PMID:
21755459
44.

Hystricognathy vs sciurognathy in the rodent jaw: a new morphometric assessment of hystricognathy applied to the living fossil Laonastes (Diatomyidae).

Hautier L, Lebrun R, Saksiri S, Michaux J, Vianey-Liaud M, Marivaux L.

PLoS One. 2011 Apr 7;6(4):e18698. doi: 10.1371/journal.pone.0018698.

45.

Phylogenetic analyses of mitochondrial and nuclear data in haematophagous flies support the paraphyly of the genus Stomoxys (Diptera: Muscidae).

Dsouli N, Delsuc F, Michaux J, De Stordeur E, Couloux A, Veuille M, Duvallet G.

Infect Genet Evol. 2011 Apr;11(3):663-70. doi: 10.1016/j.meegid.2011.02.004. Epub 2011 Feb 13.

46.

Bayesian analysis of hybridization and introgression between the endangered european mink (Mustela lutreola) and the polecat (Mustela putorius).

Cabria MT, Michaux JR, Gómez-Moliner BJ, Skumatov D, Maran T, Fournier P, de Luzuriaga JL, Zardoya R.

Mol Ecol. 2011 Mar;20(6):1176-90. doi: 10.1111/j.1365-294X.2010.04988.x. Epub 2011 Jan 18.

47.

Body shape and life style of the extinct Balearic dormouse Hypnomys (Rodentia, Gliridae): new evidence from the study of associated skeletons.

Bover P, Alcover JA, Michaux JJ, Hautier L, Hutterer R.

PLoS One. 2010 Dec 31;5(12):e15817. doi: 10.1371/journal.pone.0015817.

48.

Discovery and SAR of 5-(3-chlorophenylamino)benzo[c][2,6]naphthyridine-8-carboxylic acid (CX-4945), the first clinical stage inhibitor of protein kinase CK2 for the treatment of cancer.

Pierre F, Chua PC, O'Brien SE, Siddiqui-Jain A, Bourbon P, Haddach M, Michaux J, Nagasawa J, Schwaebe MK, Stefan E, Vialettes A, Whitten JP, Chen TK, Darjania L, Stansfield R, Anderes K, Bliesath J, Drygin D, Ho C, Omori M, Proffitt C, Streiner N, Trent K, Rice WG, Ryckman DM.

J Med Chem. 2011 Jan 27;54(2):635-54. doi: 10.1021/jm101251q. Epub 2010 Dec 21.

PMID:
21174434
49.

Diet of the extinct Lava mouse Malpaisomys insularis from the Canary Islands: insights from dental microwear.

Firmat C, Gomes Rodrigues H, Hutterer R, Rando JC, Alcover JA, Michaux J.

Naturwissenschaften. 2011 Jan;98(1):33-7. doi: 10.1007/s00114-010-0738-z. Epub 2010 Nov 24.

PMID:
21107517
50.

Global population structure of the stable fly (Stomoxys calcitrans) inferred by mitochondrial and nuclear sequence data.

Dsouli-Aymes N, Michaux J, De Stordeur E, Couloux A, Veuille M, Duvallet G.

Infect Genet Evol. 2011 Mar;11(2):334-42. doi: 10.1016/j.meegid.2010.11.001. Epub 2010 Nov 18.

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