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Items: 18

1.

Landscape of Germline and Somatic Mitochondrial DNA Mutations in Pediatric Malignancies.

Triska P, Kaneva K, Merkurjev D, Sohail N, Falk MJ, Triche TJ Jr, Biegel JA, Gai X.

Cancer Res. 2019 Apr 1;79(7):1318-1330. doi: 10.1158/0008-5472.CAN-18-2220. Epub 2019 Feb 1.

PMID:
30709931
2.

Author Correction: Synaptic N6-methyladenosine (m6A) epitranscriptome reveals functional partitioning of localized transcripts.

Merkurjev D, Hong WT, Iida K, Oomoto I, Goldie BJ, Yamaguti H, Ohara T, Kawaguchi SY, Hirano T, Martin KC, Pellegrini M, Wang DO.

Nat Neurosci. 2018 Oct;21(10):1493. doi: 10.1038/s41593-018-0219-9.

PMID:
30097659
3.

Synaptic N6-methyladenosine (m6A) epitranscriptome reveals functional partitioning of localized transcripts.

Merkurjev D, Hong WT, Iida K, Oomoto I, Goldie BJ, Yamaguti H, Ohara T, Kawaguchi SY, Hirano T, Martin KC, Pellegrini M, Wang DO.

Nat Neurosci. 2018 Jul;21(7):1004-1014. doi: 10.1038/s41593-018-0173-6. Epub 2018 Jun 27. Erratum in: Nat Neurosci. 2018 Oct;21(10):1493.

PMID:
29950670
4.

Spliceosome Profiling Visualizes Operations of a Dynamic RNP at Nucleotide Resolution.

Burke JE, Longhurst AD, Merkurjev D, Sales-Lee J, Rao B, Moresco JJ, Yates JR 3rd, Li JJ, Madhani HD.

Cell. 2018 May 3;173(4):1014-1030.e17. doi: 10.1016/j.cell.2018.03.020.

5.

Pluripotency factors functionally premark cell-type-restricted enhancers in ES cells.

Kim HS, Tan Y, Ma W, Merkurjev D, Destici E, Ma Q, Suter T, Ohgi K, Friedman M, Skowronska-Krawczyk D, Rosenfeld MG.

Nature. 2018 Apr;556(7702):510-514. doi: 10.1038/s41586-018-0048-8. Epub 2018 Apr 18. Update in: Cell Cycle. 2018;17(13):1525-1526.

6.

Histone demethylase LSD1 regulates hematopoietic stem cells homeostasis and protects from death by endotoxic shock.

Wang J, Saijo K, Skola D, Jin C, Ma Q, Merkurjev D, Glass CK, Rosenfeld MG.

Proc Natl Acad Sci U S A. 2018 Jan 9;115(2):E244-E252. doi: 10.1073/pnas.1718759114. Epub 2017 Dec 20.

7.

ATR inhibition facilitates targeting of leukemia dependence on convergent nucleotide biosynthetic pathways.

Le TM, Poddar S, Capri JR, Abt ER, Kim W, Wei L, Uong NT, Cheng CM, Braas D, Nikanjam M, Rix P, Merkurjev D, Zaretsky J, Kornblum HI, Ribas A, Herschman HR, Whitelegge J, Faull KF, Donahue TR, Czernin J, Radu CG.

Nat Commun. 2017 Aug 14;8(1):241. doi: 10.1038/s41467-017-00221-3.

8.

Spemann organizer transcriptome induction by early beta-catenin, Wnt, Nodal, and Siamois signals in Xenopus laevis.

Ding Y, Ploper D, Sosa EA, Colozza G, Moriyama Y, Benitez MD, Zhang K, Merkurjev D, De Robertis EM.

Proc Natl Acad Sci U S A. 2017 Apr 11;114(15):E3081-E3090. doi: 10.1073/pnas.1700766114. Epub 2017 Mar 27.

9.

Epithelial cell integrin β1 is required for developmental angiogenesis in the pituitary gland.

Scully KM, Skowronska-Krawczyk D, Krawczyk M, Merkurjev D, Taylor H, Livolsi A, Tollkuhn J, Stan RV, Rosenfeld MG.

Proc Natl Acad Sci U S A. 2016 Nov 22;113(47):13408-13413. Epub 2016 Nov 3.

10.

LSD1n is an H4K20 demethylase regulating memory formation via transcriptional elongation control.

Wang J, Telese F, Tan Y, Li W, Jin C, He X, Basnet H, Ma Q, Merkurjev D, Zhu X, Liu Z, Zhang J, Ohgi K, Taylor H, White RR, Tazearslan C, Suh Y, Macfarlan TS, Pfaff SL, Rosenfeld MG.

Nat Neurosci. 2015 Sep;18(9):1256-64. doi: 10.1038/nn.4069. Epub 2015 Jul 27.

11.

Condensin I and II Complexes License Full Estrogen Receptor α-Dependent Enhancer Activation.

Li W, Hu Y, Oh S, Ma Q, Merkurjev D, Song X, Zhou X, Liu Z, Tanasa B, He X, Chen AY, Ohgi K, Zhang J, Liu W, Rosenfeld MG.

Mol Cell. 2015 Jul 16;59(2):188-202. doi: 10.1016/j.molcel.2015.06.002. Epub 2015 Jul 9.

12.

Evolutionary trends and functional anatomy of the human expanded autophagy network.

Till A, Saito R, Merkurjev D, Liu JJ, Syed GH, Kolnik M, Siddiqui A, Glas M, Scheffler B, Ideker T, Subramani S.

Autophagy. 2015;11(9):1652-67. doi: 10.1080/15548627.2015.1059558.

13.

Enhancer-bound LDB1 regulates a corticotrope promoter-pausing repression program.

Zhang F, Tanasa B, Merkurjev D, Lin C, Song X, Li W, Tan Y, Liu Z, Zhang J, Ohgi KA, Krones A, Skowronska-Krawczyk D, Rosenfeld MG.

Proc Natl Acad Sci U S A. 2015 Feb 3;112(5):1380-5. doi: 10.1073/pnas.1424228112. Epub 2015 Jan 20.

14.

Enhancer activation requires trans-recruitment of a mega transcription factor complex.

Liu Z, Merkurjev D, Yang F, Li W, Oh S, Friedman MJ, Song X, Zhang F, Ma Q, Ohgi KA, Krones A, Rosenfeld MG.

Cell. 2014 Oct 9;159(2):358-73. doi: 10.1016/j.cell.2014.08.027.

15.

Tyrosine phosphorylation of histone H2A by CK2 regulates transcriptional elongation.

Basnet H, Su XB, Tan Y, Meisenhelder J, Merkurjev D, Ohgi KA, Hunter T, Pillus L, Rosenfeld MG.

Nature. 2014 Dec 11;516(7530):267-71. doi: 10.1038/nature13736. Epub 2014 Sep 24.

16.

Chem-seq permits identification of genomic targets of drugs against androgen receptor regulation selected by functional phenotypic screens.

Jin C, Yang L, Xie M, Lin C, Merkurjev D, Yang JC, Tanasa B, Oh S, Zhang J, Ohgi KA, Zhou H, Li W, Evans CP, Ding S, Rosenfeld MG.

Proc Natl Acad Sci U S A. 2014 Jun 24;111(25):9235-40. doi: 10.1073/pnas.1404303111. Epub 2014 Jun 13.

17.

lncRNA-dependent mechanisms of androgen-receptor-regulated gene activation programs.

Yang L, Lin C, Jin C, Yang JC, Tanasa B, Li W, Merkurjev D, Ohgi KA, Meng D, Zhang J, Evans CP, Rosenfeld MG.

Nature. 2013 Aug 29;500(7464):598-602. doi: 10.1038/nature12451. Epub 2013 Aug 14.

18.

Functional roles of enhancer RNAs for oestrogen-dependent transcriptional activation.

Li W, Notani D, Ma Q, Tanasa B, Nunez E, Chen AY, Merkurjev D, Zhang J, Ohgi K, Song X, Oh S, Kim HS, Glass CK, Rosenfeld MG.

Nature. 2013 Jun 27;498(7455):516-20. doi: 10.1038/nature12210. Epub 2013 Jun 2.

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