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Items: 26

1.

Pigeon foot feathering reveals conserved limb identity networks.

Boer EF, Van Hollebeke HF, Park S, Infante CR, Menke DB, Shapiro MD.

Dev Biol. 2019 Jun 24. pii: S0012-1606(19)30274-X. doi: 10.1016/j.ydbio.2019.06.015. [Epub ahead of print]

2.

A novel enhancer near the Pitx1 gene influences development and evolution of pelvic appendages in vertebrates.

Thompson AC, Capellini TD, Guenther CA, Chan YF, Infante CR, Menke DB, Kingsley DM.

Elife. 2018 Nov 30;7. pii: e38555. doi: 10.7554/eLife.38555.

3.

A PAGE screening approach for identifying CRISPR-Cas9-induced mutations in zebrafish.

VanLeuven AJ, Park S, Menke DB, Lauderdale JD.

Biotechniques. 2018 Jun;64(6):275-278. doi: 10.2144/btn-2018-0012.

4.

Comparative Genomics Reveals Accelerated Evolution in Conserved Pathways during the Diversification of Anole Lizards.

Tollis M, Hutchins ED, Stapley J, Rupp SM, Eckalbar WL, Maayan I, Lasku E, Infante CR, Dennis SR, Robertson JA, May CM, Crusoe MR, Bermingham E, DeNardo DF, Hsieh ST, Kulathinal RJ, McMillan WO, Menke DB, Pratt SC, Rawls JA, Sanjur O, Wilson-Rawls J, Wilson Sayres MA, Fisher RE, Kusumi K.

Genome Biol Evol. 2018 Feb 1;10(2):489-506. doi: 10.1093/gbe/evy013.

5.

PITX1 promotes chondrogenesis and myogenesis in mouse hindlimbs through conserved regulatory targets.

Wang JS, Infante CR, Park S, Menke DB.

Dev Biol. 2018 Feb 1;434(1):186-195. doi: 10.1016/j.ydbio.2017.12.013. Epub 2017 Dec 20.

6.

Isl1 mediates mesenchymal expansion in the developing external genitalia via regulation of Bmp4, Fgf10 and Wnt5a.

Ching ST, Infante CR, Du W, Sharir A, Park S, Menke DB, Klein OD.

Hum Mol Genet. 2018 Jan 1;27(1):107-119. doi: 10.1093/hmg/ddx388.

7.

Appendages and gene regulatory networks: Lessons from the limbless.

Infante CR, Rasys AM, Menke DB.

Genesis. 2018 Jan;56(1). doi: 10.1002/dvg.23078. Epub 2017 Oct 27. Review.

8.

Molecular shifts in limb identity underlie development of feathered feet in two domestic avian species.

Domyan ET, Kronenberg Z, Infante CR, Vickrey AI, Stringham SA, Bruders R, Guernsey MW, Park S, Payne J, Beckstead RB, Kardon G, Menke DB, Yandell M, Shapiro MD.

Elife. 2016 Mar 15;5:e12115. doi: 10.7554/eLife.12115.

9.

Shared Enhancer Activity in the Limbs and Phallus and Functional Divergence of a Limb-Genital cis-Regulatory Element in Snakes.

Infante CR, Mihala AG, Park S, Wang JS, Johnson KK, Lauderdale JD, Menke DB.

Dev Cell. 2015 Oct 12;35(1):107-19. doi: 10.1016/j.devcel.2015.09.003. Epub 2015 Oct 1.

10.

Mesenchymal adenomatous polyposis coli plays critical and diverse roles in regulating lung development.

Luo Y, El Agha E, Turcatel G, Chen H, Chiu J, Warburton D, Bellusci S, Qian BP, Menke DB, Shi W.

BMC Biol. 2015 Jun 20;13:42. doi: 10.1186/s12915-015-0153-1.

11.

Mesenchymal cells. Defining a mesenchymal progenitor niche at single-cell resolution.

Kumar ME, Bogard PE, Espinoza FH, Menke DB, Kingsley DM, Krasnow MA.

Science. 2014 Nov 14;346(6211):1258810. doi: 10.1126/science.1258810.

12.

Conserved regulation of hoxc11 by pitx1 in Anolis lizards.

Park S, Infante CR, Rivera-Davila LC, Menke DB.

J Exp Zool B Mol Dev Evol. 2014 May;322(3):156-65. doi: 10.1002/jez.b.22554. Epub 2013 Dec 23.

PMID:
24376195
13.

Lung mesenchymal expression of Sox9 plays a critical role in tracheal development.

Turcatel G, Rubin N, Menke DB, Martin G, Shi W, Warburton D.

BMC Biol. 2013 Nov 25;11:117. doi: 10.1186/1741-7007-11-117.

14.

Spatial-temporal targeting of lung-specific mesenchyme by a Tbx4 enhancer.

Zhang W, Menke DB, Jiang M, Chen H, Warburton D, Turcatel G, Lu CH, Xu W, Luo Y, Shi W.

BMC Biol. 2013 Nov 13;11:111. doi: 10.1186/1741-7007-11-111.

15.

Engineering subtle targeted mutations into the mouse genome.

Menke DB.

Genesis. 2013 Sep;51(9):605-18. doi: 10.1002/dvg.22422. Epub 2013 Aug 30. Review.

PMID:
23913666
16.

Pitx1 broadly associates with limb enhancers and is enriched on hindlimb cis-regulatory elements.

Infante CR, Park S, Mihala AG, Kingsley DM, Menke DB.

Dev Biol. 2013 Feb 1;374(1):234-44. doi: 10.1016/j.ydbio.2012.11.017. Epub 2012 Nov 27.

17.

Developing a community-based genetic nomenclature for anole lizards.

Kusumi K, Kulathinal RJ, Abzhanov A, Boissinot S, Crawford NG, Faircloth BC, Glenn TC, Janes DE, Losos JB, Menke DB, Poe S, Sanger TJ, Schneider CJ, Stapley J, Wade J, Wilson-Rawls J.

BMC Genomics. 2011 Nov 11;12:554. doi: 10.1186/1471-2164-12-554.

18.

Human-specific loss of regulatory DNA and the evolution of human-specific traits.

McLean CY, Reno PL, Pollen AA, Bassan AI, Capellini TD, Guenther C, Indjeian VB, Lim X, Menke DB, Schaar BT, Wenger AM, Bejerano G, Kingsley DM.

Nature. 2011 Mar 10;471(7337):216-9. doi: 10.1038/nature09774.

19.

Dual hindlimb control elements in the Tbx4 gene and region-specific control of bone size in vertebrate limbs.

Menke DB, Guenther C, Kingsley DM.

Development. 2008 Aug;135(15):2543-53. doi: 10.1242/dev.017384. Epub 2008 Jun 25.

20.

In germ cells of mouse embryonic ovaries, the decision to enter meiosis precedes premeiotic DNA replication.

Baltus AE, Menke DB, Hu YC, Goodheart ML, Carpenter AE, de Rooij DG, Page DC.

Nat Genet. 2006 Dec;38(12):1430-4. Epub 2006 Nov 19.

PMID:
17115059
21.

Retinoic acid regulates sex-specific timing of meiotic initiation in mice.

Koubova J, Menke DB, Zhou Q, Capel B, Griswold MD, Page DC.

Proc Natl Acad Sci U S A. 2006 Feb 21;103(8):2474-9. Epub 2006 Feb 6.

22.

Follistatin operates downstream of Wnt4 in mammalian ovary organogenesis.

Yao HH, Matzuk MM, Jorgez CJ, Menke DB, Page DC, Swain A, Capel B.

Dev Dyn. 2004 Jun;230(2):210-5.

23.

Wt1 functions in the development of germ cells in addition to somatic cell lineages of the testis.

Natoli TA, Alberta JA, Bortvin A, Taglienti ME, Menke DB, Loring J, Jaenisch R, Page DC, Housman DE, Kreidberg JA.

Dev Biol. 2004 Apr 15;268(2):429-40.

24.
25.

Sexually dimorphic gene expression in the developing mouse gonad.

Menke DB, Page DC.

Gene Expr Patterns. 2002 Dec;2(3-4):359-67.

PMID:
12617826
26.

Expression of DAZ, an azoospermia factor candidate, in human spermatogonia.

Menke DB, Mutter GL, Page DC.

Am J Hum Genet. 1997 Jan;60(1):237-41. No abstract available.

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