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Items: 15

1.

NGS barcode sequencing in taxonomy and diagnostics, an application in "Candida" pathogenic yeasts with a metagenomic perspective.

Colabella C, Corte L, Roscini L, Bassetti M, Tascini C, Mellor JC, Meyer W, Robert V, Vu D, Cardinali G.

IMA Fungus. 2018 Jun;9(1):91-105. doi: 10.5598/imafungus.2018.09.01.07. Epub 2018 May 22.

2.

Application of Data Mining to "Big Data" Acquired in Audiology: Principles and Potential.

Mellor JC, Stone MA, Keane J.

Trends Hear. 2018 Jan-Dec;22:2331216518776817. doi: 10.1177/2331216518776817.

3.

Mapping DNA damage-dependent genetic interactions in yeast via party mating and barcode fusion genetics.

Díaz-Mejía JJ, Celaj A, Mellor JC, Coté A, Balint A, Ho B, Bansal P, Shaeri F, Gebbia M, Weile J, Verby M, Karkhanina A, Zhang Y, Wong C, Rich J, Prendergast D, Gupta G, Öztürk S, Durocher D, Brown GW, Roth FP.

Mol Syst Biol. 2018 May 28;14(5):e7985. doi: 10.15252/msb.20177985.

4.

A framework for exhaustively mapping functional missense variants.

Weile J, Sun S, Cote AG, Knapp J, Verby M, Mellor JC, Wu Y, Pons C, Wong C, van Lieshout N, Yang F, Tasan M, Tan G, Yang S, Fowler DM, Nussbaum R, Bloom JD, Vidal M, Hill DE, Aloy P, Roth FP.

Mol Syst Biol. 2017 Dec 21;13(12):957. doi: 10.15252/msb.20177908.

5.

Exploring genetic suppression interactions on a global scale.

van Leeuwen J, Pons C, Mellor JC, Yamaguchi TN, Friesen H, Koschwanez J, Ušaj MM, Pechlaner M, Takar M, Ušaj M, VanderSluis B, Andrusiak K, Bansal P, Baryshnikova A, Boone CE, Cao J, Cote A, Gebbia M, Horecka G, Horecka I, Kuzmin E, Legro N, Liang W, van Lieshout N, McNee M, San Luis BJ, Shaeri F, Shuteriqi E, Sun S, Yang L, Youn JY, Yuen M, Costanzo M, Gingras AC, Aloy P, Oostenbrink C, Murray A, Graham TR, Myers CL, Andrews BJ, Roth FP, Boone C.

Science. 2016 Nov 4;354(6312). pii: aag0839.

6.

Reverse Chemical Genetics: Comprehensive Fitness Profiling Reveals the Spectrum of Drug Target Interactions.

Wong LH, Sinha S, Bergeron JR, Mellor JC, Giaever G, Flaherty P, Nislow C.

PLoS Genet. 2016 Sep 2;12(9):e1006275. doi: 10.1371/journal.pgen.1006275. eCollection 2016 Sep.

7.

Pooled-matrix protein interaction screens using Barcode Fusion Genetics.

Yachie N, Petsalaki E, Mellor JC, Weile J, Jacob Y, Verby M, Ozturk SB, Li S, Cote AG, Mosca R, Knapp JJ, Ko M, Yu A, Gebbia M, Sahni N, Yi S, Tyagi T, Sheykhkarimli D, Roth JF, Wong C, Musa L, Snider J, Liu YC, Yu H, Braun P, Stagljar I, Hao T, Calderwood MA, Pelletier L, Aloy P, Hill DE, Vidal M, Roth FP.

Mol Syst Biol. 2016 Apr 22;12(4):863. doi: 10.15252/msb.20156660.

8.

Cross-species protein interactome mapping reveals species-specific wiring of stress response pathways.

Das J, Vo TV, Wei X, Mellor JC, Tong V, Degatano AG, Wang X, Wang L, Cordero NA, Kruer-Zerhusen N, Matsuyama A, Pleiss JA, Lipkin SM, Yoshida M, Roth FP, Yu H.

Sci Signal. 2013 May 21;6(276):ra38. doi: 10.1126/scisignal.2003350.

9.

Reconstitution of human RNA interference in budding yeast.

Suk K, Choi J, Suzuki Y, Ozturk SB, Mellor JC, Wong KH, MacKay JL, Gregory RI, Roth FP.

Nucleic Acids Res. 2011 Apr;39(7):e43. doi: 10.1093/nar/gkq1321. Epub 2011 Jan 19.

10.

Genome-wide functional analysis of human 5' untranslated region introns.

Cenik C, Derti A, Mellor JC, Berriz GF, Roth FP.

Genome Biol. 2010;11(3):R29. doi: 10.1186/gb-2010-11-3-r29. Epub 2010 Mar 11.

11.

Numerous conserved and divergent microRNAs expressed by herpes simplex viruses 1 and 2.

Jurak I, Kramer MF, Mellor JC, van Lint AL, Roth FP, Knipe DM, Coen DM.

J Virol. 2010 May;84(9):4659-72. doi: 10.1128/JVI.02725-09. Epub 2010 Feb 24.

12.

Deciphering protein network organization using phylogenetic profile groups.

Wu J, Mellor JC, DeLisi C.

Genome Inform. 2005;16(1):142-9.

PMID:
16362916
13.

Constructing networks with correlation maximization methods.

Mellor JC, Wu J, Delisi C.

Genome Inform. 2004;15(1):149-59.

PMID:
15712118
14.

Identifying functional links between genes using conserved chromosomal proximity.

Yanai I, Mellor JC, DeLisi C.

Trends Genet. 2002 Apr;18(4):176-9.

PMID:
11932011
15.

Predictome: a database of putative functional links between proteins.

Mellor JC, Yanai I, Clodfelter KH, Mintseris J, DeLisi C.

Nucleic Acids Res. 2002 Jan 1;30(1):306-9.

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