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Items: 21

1.

The complex domain architecture of SAMD9 family proteins, predicted STAND-like NTPases, suggests new links to inflammation and apoptosis.

Mekhedov SL, Makarova KS, Koonin EV.

Biol Direct. 2017 May 25;12(1):13. doi: 10.1186/s13062-017-0185-2.

2.

Myosin-driven transport network in plants.

Kurth EG, Peremyslov VV, Turner HL, Makarova KS, Iranzo J, Mekhedov SL, Koonin EV, Dolja VV.

Proc Natl Acad Sci U S A. 2017 Feb 21;114(8):E1385-E1394. doi: 10.1073/pnas.1620577114. Epub 2017 Jan 17.

3.

Genomic determinants of sporulation in Bacilli and Clostridia: towards the minimal set of sporulation-specific genes.

Galperin MY, Mekhedov SL, Puigbo P, Smirnov S, Wolf YI, Rigden DJ.

Environ Microbiol. 2012 Nov;14(11):2870-90. doi: 10.1111/j.1462-2920.2012.02841.x. Epub 2012 Aug 13.

4.

The deep archaeal roots of eukaryotes.

Yutin N, Makarova KS, Mekhedov SL, Wolf YI, Koonin EV.

Mol Biol Evol. 2008 Aug;25(8):1619-30. doi: 10.1093/molbev/msn108. Epub 2008 May 6.

5.

The cyanobacterial genome core and the origin of photosynthesis.

Mulkidjanian AY, Koonin EV, Makarova KS, Mekhedov SL, Sorokin A, Wolf YI, Dufresne A, Partensky F, Burd H, Kaznadzey D, Haselkorn R, Galperin MY.

Proc Natl Acad Sci U S A. 2006 Aug 29;103(35):13126-31. Epub 2006 Aug 21.

6.

Ancestral paralogs and pseudoparalogs and their role in the emergence of the eukaryotic cell.

Makarova KS, Wolf YI, Mekhedov SL, Mirkin BG, Koonin EV.

Nucleic Acids Res. 2005 Aug 16;33(14):4626-38. Print 2005.

7.

Evolution of eukaryotic gene repertoire and gene structure: discovering the unexpected dynamics of genome evolution.

Rogozin IB, Babenko VN, Fedorova ND, Jackson JD, Jacobs AR, Krylov DM, Makarova KS, Mazumder R, Mekhedov SL, Mirkin BG, Nikolskaya AN, Rao BS, Smirnov S, Sorokin AV, Sverdlov AV, Vasudevan S, Wolf YI, Yin JJ, Natale DA, Koonin EV.

Cold Spring Harb Symp Quant Biol. 2003;68:293-301. No abstract available.

PMID:
15338629
8.

Prevalence of intron gain over intron loss in the evolution of paralogous gene families.

Babenko VN, Rogozin IB, Mekhedov SL, Koonin EV.

Nucleic Acids Res. 2004 Jul 14;32(12):3724-33. Print 2004.

9.

A comprehensive evolutionary classification of proteins encoded in complete eukaryotic genomes.

Koonin EV, Fedorova ND, Jackson JD, Jacobs AR, Krylov DM, Makarova KS, Mazumder R, Mekhedov SL, Nikolskaya AN, Rao BS, Rogozin IB, Smirnov S, Sorokin AV, Sverdlov AV, Vasudevan S, Wolf YI, Yin JJ, Natale DA.

Genome Biol. 2004;5(2):R7. Epub 2004 Jan 15.

10.

The COG database: an updated version includes eukaryotes.

Tatusov RL, Fedorova ND, Jackson JD, Jacobs AR, Kiryutin B, Koonin EV, Krylov DM, Mazumder R, Mekhedov SL, Nikolskaya AN, Rao BS, Smirnov S, Sverdlov AV, Vasudevan S, Wolf YI, Yin JJ, Natale DA.

BMC Bioinformatics. 2003 Sep 11;4:41. Epub 2003 Sep 11.

11.

Selection for short introns in highly expressed genes.

Castillo-Davis CI, Mekhedov SL, Hartl DL, Koonin EV, Kondrashov FA.

Nat Genet. 2002 Aug;31(4):415-8. Epub 2002 Jul 22.

PMID:
12134150
13.

[Structural organization of C-hordein genes from barley].

Saianova OV, Mekhedov SL, Burkitbaev EM, Shchikova NI, Anan'ev EV.

Genetika. 1994 Jun;30(6):749-55. Russian.

PMID:
7958788
14.

[Nucleotide sequence of the barley C-hordein gene].

Sainova OV, Mekhedov SL, Zhelnin LG, Khokhlova TA, Anan'ev EV.

Genetika. 1993 Jul;29(7):1070-9. Russian.

PMID:
8396543
15.

[Bacillus subtilis gene rec223: molecular cloning and proposed function of its protein product].

Gavrilova EV, Mekhedov SL, Prozorov AA, Khasanov FK.

Genetika. 1992 May;28(5):29-39. Russian.

PMID:
1639259
16.

[Nucleotide sequence of the B1-hordein gene of barley Hordeum vulgare L].

Chernyshev AI, Davletova ShK, Bashkirov VI, Shakhmanov NB, Mekhedov SL, Anan'ev EV.

Genetika. 1989 Aug;25(8):1349-55. Russian.

PMID:
2583483
17.
18.

DNA rearrangements generating artificial promoters.

Gragerov AI, Smirnov OYu, Mekhedov SL, Nikiforov VG, Chuvpilo SA, Korobko VG.

FEBS Lett. 1984 Jun 25;172(1):64-6.

19.

[Cloning of the promoter of the RNA polymerase operon located before the structural gene of the beta-subunit].

Bass IA, Kurenova EV, Mekhedov SL.

Mol Biol (Mosk). 1982 May-Jun;16(3):575-80. Russian.

PMID:
6285178
20.

[Effect of rifampicin on the synthesis of bacterial RNA polymerase mRNA by means of hybrid plasmids].

Bass IA, Danilevskaia ON, Mekhedov SL, Gorlenko ZhM, Fedoseeva VB.

Mol Biol (Mosk). 1979 Sep-Oct;13(5):1052-63. Russian.

PMID:
388190
21.

The effect of rifampicin upon the transcription of RNA polymerase beta-gene in Escherichia coli.

Bass IA, Danilevskaya ON, Mekhedov SL, Fedoseeva VB, Gorlenko ZM.

Mol Gen Genet. 1979 May 23;173(1):101-7.

PMID:
381837

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