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Items: 1 to 50 of 121

1.

Functional analysis of the HD-Zip transcription factor genes Oshox12 and Oshox14 in rice.

Shao J, Haider I, Xiong L, Zhu X, Hussain RMF, Övernäs E, Meijer AH, Zhang G, Wang M, Bouwmeester HJ, Ouwerkerk PBF.

PLoS One. 2018 Jul 20;13(7):e0199248. doi: 10.1371/journal.pone.0199248. eCollection 2018.

2.

The Difference between White and Red Ginseng: Variations in Ginsenosides and Immunomodulation.

He M, Huang X, Liu S, Guo C, Xie Y, Meijer AH, Wang M.

Planta Med. 2018 Aug;84(12-13):845-854. doi: 10.1055/a-0641-6240. Epub 2018 Jun 20. Review.

PMID:
29925101
3.

Ultrastructural Imaging of Salmonella-Host Interactions Using Super-resolution Correlative Light-Electron Microscopy of Bioorthogonal Pathogens.

van Elsland DM, Pujals S, Bakkum T, Bos E, Oikonomeas-Koppasis N, Berlin I, Neefjes J, Meijer AH, Koster AJ, Albertazzi L, van Kasteren SI.

Chembiochem. 2018 Jun 5. doi: 10.1002/cbic.201800230. [Epub ahead of print]

4.

Microbiota promote secretory cell determination in the intestinal epithelium by modulating host Notch signaling.

Troll JV, Hamilton MK, Abel ML, Ganz J, Bates JM, Stephens WZ, Melancon E, van der Vaart M, Meijer AH, Distel M, Eisen JS, Guillemin K.

Development. 2018 Feb 23;145(4). pii: dev155317. doi: 10.1242/dev.155317.

5.

Correction: Macrophages, but not neutrophils, are critical for proliferation of Burkholderia cenocepacia and ensuing host-damaging inflammation.

Mesureur J, Feliciano JR, Wagner N, Gomes MC, Zhang L, Blanco-Gonzalez M, van der Vaart M, O'Callaghan D, Meijer AH, Vergunst AC.

PLoS Pathog. 2017 Dec 20;13(12):e1006795. doi: 10.1371/journal.ppat.1006795. eCollection 2017 Dec.

6.

COMICS: Cartoon Visualization of Omics Data in Spatial Context Using Anatomical Ontologies.

Travin D, Popov I, Guler AT, Medvedev D, van der Plas-Duivesteijn S, Varela M, Kolder ICRM, Meijer AH, Spaink HP, Palmblad M.

J Proteome Res. 2018 Jan 5;17(1):739-744. doi: 10.1021/acs.jproteome.7b00615. Epub 2017 Nov 13.

7.

Macrophages as drivers of an opportunistic infection.

Vergunst AC, Carranza NL, Zhang L, Gomes MC, Tasrini Y, Meijer AH, O'Callaghan D.

Microb Cell. 2017 Sep 13;4(10):362-364. doi: 10.15698/mic2017.10.595.

8.

Adverse outcome pathways: opportunities, limitations and open questions.

Leist M, Ghallab A, Graepel R, Marchan R, Hassan R, Bennekou SH, Limonciel A, Vinken M, Schildknecht S, Waldmann T, Danen E, van Ravenzwaay B, Kamp H, Gardner I, Godoy P, Bois FY, Braeuning A, Reif R, Oesch F, Drasdo D, Höhme S, Schwarz M, Hartung T, Braunbeck T, Beltman J, Vrieling H, Sanz F, Forsby A, Gadaleta D, Fisher C, Kelm J, Fluri D, Ecker G, Zdrazil B, Terron A, Jennings P, van der Burg B, Dooley S, Meijer AH, Willighagen E, Martens M, Evelo C, Mombelli E, Taboureau O, Mantovani A, Hardy B, Koch B, Escher S, van Thriel C, Cadenas C, Kroese D, van de Water B, Hengstler JG.

Arch Toxicol. 2017 Nov;91(11):3477-3505. doi: 10.1007/s00204-017-2045-3. Epub 2017 Oct 19. Review.

PMID:
29051992
9.

Bacterial size matters: Multiple mechanisms controlling septum cleavage and diplococcus formation are critical for the virulence of the opportunistic pathogen Enterococcus faecalis.

Salamaga B, Prajsnar TK, Jareño-Martinez A, Willemse J, Bewley MA, Chau F, Ben Belkacem T, Meijer AH, Dockrell DH, Renshaw SA, Mesnage S.

PLoS Pathog. 2017 Jul 24;13(7):e1006526. doi: 10.1371/journal.ppat.1006526. eCollection 2017 Jul.

10.

Studying Autophagy in Zebrafish.

Mathai BJ, Meijer AH, Simonsen A.

Cells. 2017 Jul 9;6(3). pii: E21. doi: 10.3390/cells6030021. Review.

11.

Expression and regulation of drug transporters in vertebrate neutrophils.

Foulkes MJ, Henry KM, Rougeot J, Hooper-Greenhill E, Loynes CA, Jeffrey P, Fleming A, Savage CO, Meijer AH, Jones S, Renshaw SA.

Sci Rep. 2017 Jul 10;7(1):4967. doi: 10.1038/s41598-017-04785-4.

12.

Macrophages, but not neutrophils, are critical for proliferation of Burkholderia cenocepacia and ensuing host-damaging inflammation.

Mesureur J, Feliciano JR, Wagner N, Gomes MC, Zhang L, Blanco-Gonzalez M, van der Vaart M, O'Callaghan D, Meijer AH, Vergunst AC.

PLoS Pathog. 2017 Jun 26;13(6):e1006437. doi: 10.1371/journal.ppat.1006437. eCollection 2017 Jun. Erratum in: PLoS Pathog. 2017 Dec 20;13(12 ):e1006795.

13.

Modeling Infectious Diseases in the Context of a Developing Immune System.

Masud S, Torraca V, Meijer AH.

Curr Top Dev Biol. 2017;124:277-329. doi: 10.1016/bs.ctdb.2016.10.006. Epub 2016 Dec 19. Review.

PMID:
28335862
14.

The chemokine receptor CXCR4 promotes granuloma formation by sustaining a mycobacteria-induced angiogenesis programme.

Torraca V, Tulotta C, Snaar-Jagalska BE, Meijer AH.

Sci Rep. 2017 Mar 23;7:45061. doi: 10.1038/srep45061.

15.

Functional analysis reveals no transcriptional role for the glucocorticoid receptor β-isoform in zebrafish.

Chatzopoulou A, Schoonheim PJ, Torraca V, Meijer AH, Spaink HP, Schaaf MJ.

Mol Cell Endocrinol. 2017 May 15;447:61-70. doi: 10.1016/j.mce.2017.02.036. Epub 2017 Feb 24.

PMID:
28242321
16.

The inflammatory chemokine Cxcl18b exerts neutrophil-specific chemotaxis via the promiscuous chemokine receptor Cxcr2 in zebrafish.

Torraca V, Otto NA, Tavakoli-Tameh A, Meijer AH.

Dev Comp Immunol. 2017 Feb;67:57-65. doi: 10.1016/j.dci.2016.10.014. Epub 2016 Nov 1.

17.

Transcriptomic Approaches in the Zebrafish Model for Tuberculosis-Insights Into Host- and Pathogen-specific Determinants of the Innate Immune Response.

Benard EL, Rougeot J, Racz PI, Spaink HP, Meijer AH.

Adv Genet. 2016;95:217-51. doi: 10.1016/bs.adgen.2016.04.004. Epub 2016 Jun 14. Review.

PMID:
27503359
18.

Efferocytosis and extrusion of leukocytes determine the progression of early mycobacterial pathogenesis.

Hosseini R, Lamers GE, Soltani HM, Meijer AH, Spaink HP, Schaaf MJ.

J Cell Sci. 2016 Sep 15;129(18):3385-95. doi: 10.1242/jcs.135194. Epub 2016 Jul 28.

19.

Imaging of Human Cancer Cell Proliferation, Invasion, and Micrometastasis in a Zebrafish Xenogeneic Engraftment Model.

Tulotta C, He S, Chen L, Groenewoud A, van der Ent W, Meijer AH, Spaink HP, Snaar-Jagalska BE.

Methods Mol Biol. 2016;1451:155-69. doi: 10.1007/978-1-4939-3771-4_11.

PMID:
27464807
20.

Glucocorticoid-Induced Attenuation of the Inflammatory Response in Zebrafish.

Chatzopoulou A, Heijmans JP, Burgerhout E, Oskam N, Spaink HP, Meijer AH, Schaaf MJ.

Endocrinology. 2016 Jul;157(7):2772-84. doi: 10.1210/en.2015-2050. Epub 2016 May 24.

PMID:
27219276
21.

Linking Smokers' Susceptibility to Tuberculosis with Lysosomal Storage Disorders.

Meijer AH, Aerts JM.

Dev Cell. 2016 Apr 18;37(2):112-3. doi: 10.1016/j.devcel.2016.04.004. Review.

22.

Exploring the HIFs, buts and maybes of hypoxia signalling in disease: lessons from zebrafish models.

Elks PM, Renshaw SA, Meijer AH, Walmsley SR, van Eeden FJ.

Dis Model Mech. 2015 Nov;8(11):1349-60. doi: 10.1242/dmm.021865. Review.

23.

Protection and pathology in TB: learning from the zebrafish model.

Meijer AH.

Semin Immunopathol. 2016 Mar;38(2):261-73. doi: 10.1007/s00281-015-0522-4. Epub 2015 Sep 1. Review.

24.

Common and specific downstream signaling targets controlled by Tlr2 and Tlr5 innate immune signaling in zebrafish.

Yang S, Marín-Juez R, Meijer AH, Spaink HP.

BMC Genomics. 2015 Jul 25;16:547. doi: 10.1186/s12864-015-1740-9.

25.

Matrix metalloproteinase 9 modulates collagen matrices and wound repair.

LeBert DC, Squirrell JM, Rindy J, Broadbridge E, Lui Y, Zakrzewska A, Eliceiri KW, Meijer AH, Huttenlocher A.

Development. 2015 Jun 15;142(12):2136-46. doi: 10.1242/dev.121160. Epub 2015 May 26.

26.

Transcriptional and metabolic effects of glucocorticoid receptor α and β signaling in zebrafish.

Chatzopoulou A, Roy U, Meijer AH, Alia A, Spaink HP, Schaaf MJ.

Endocrinology. 2015 May;156(5):1757-69. doi: 10.1210/en.2014-1941. Epub 2015 Mar 10.

PMID:
25756310
27.

The CXCR3-CXCL11 signaling axis mediates macrophage recruitment and dissemination of mycobacterial infection.

Torraca V, Cui C, Boland R, Bebelman JP, van der Sar AM, Smit MJ, Siderius M, Spaink HP, Meijer AH.

Dis Model Mech. 2015 Mar;8(3):253-69. doi: 10.1242/dmm.017756. Epub 2015 Jan 8.

28.

Analysis of RNAseq datasets from a comparative infectious disease zebrafish model using GeneTiles bioinformatics.

Veneman WJ, de Sonneville J, van der Kolk KJ, Ordas A, Al-Ars Z, Meijer AH, Spaink HP.

Immunogenetics. 2015 Mar;67(3):135-47. doi: 10.1007/s00251-014-0820-3. Epub 2014 Dec 13.

29.

DRAM1 promotes the targeting of mycobacteria to selective autophagy.

Meijer AH, van der Vaart M.

Autophagy. 2014;10(12):2389-91. doi: 10.4161/15548627.2014.984280.

30.

Testing tuberculosis drug efficacy in a zebrafish high-throughput translational medicine screen.

Ordas A, Raterink RJ, Cunningham F, Jansen HJ, Wiweger MI, Jong-Raadsen S, Bos S, Bates RH, Barros D, Meijer AH, Vreeken RJ, Ballell-Pages L, Dirks RP, Hankemeier T, Spaink HP.

Antimicrob Agents Chemother. 2015 Feb;59(2):753-62. doi: 10.1128/AAC.03588-14. Epub 2014 Nov 10.

31.

Molecular and functional characterization of the scavenger receptor CD36 in zebrafish and common carp.

Fink IR, Benard EL, Hermsen T, Meijer AH, Forlenza M, Wiegertjes GF.

Mol Immunol. 2015 Feb;63(2):381-93. doi: 10.1016/j.molimm.2014.09.010. Epub 2014 Oct 11.

PMID:
25306962
32.

Macrophage-expressed perforins mpeg1 and mpeg1.2 have an anti-bacterial function in zebrafish.

Benard EL, Racz PI, Rougeot J, Nezhinsky AE, Verbeek FJ, Spaink HP, Meijer AH.

J Innate Immun. 2015;7(2):136-52. doi: 10.1159/000366103. Epub 2014 Sep 19.

33.

RNA sequencing of FACS-sorted immune cell populations from zebrafish infection models to identify cell specific responses to intracellular pathogens.

Rougeot J, Zakrzewska A, Kanwal Z, Jansen HJ, Spaink HP, Meijer AH.

Methods Mol Biol. 2014;1197:261-74. doi: 10.1007/978-1-4939-1261-2_15.

PMID:
25172286
34.

Correlative light and electron microscopy imaging of autophagy in a zebrafish infection model.

Hosseini R, Lamers GE, Hodzic Z, Meijer AH, Schaaf MJ, Spaink HP.

Autophagy. 2014 Oct 1;10(10):1844-57. doi: 10.4161/auto.29992. Epub 2014 Aug 11.

35.

Cellular visualization of macrophage pyroptosis and interleukin-1β release in a viral hemorrhagic infection in zebrafish larvae.

Varela M, Romero A, Dios S, van der Vaart M, Figueras A, Meijer AH, Novoa B.

J Virol. 2014 Oct;88(20):12026-40. doi: 10.1128/JVI.02056-14. Epub 2014 Aug 6.

36.

Phagocytosis of mycobacteria by zebrafish macrophages is dependent on the scavenger receptor Marco, a key control factor of pro-inflammatory signalling.

Benard EL, Roobol SJ, Spaink HP, Meijer AH.

Dev Comp Immunol. 2014 Dec;47(2):223-33. doi: 10.1016/j.dci.2014.07.022. Epub 2014 Jul 30.

PMID:
25086293
37.

The NTT transcription factor promotes replum development in Arabidopsis fruits.

Marsch-Martínez N, Zúñiga-Mayo VM, Herrera-Ubaldo H, Ouwerkerk PB, Pablo-Villa J, Lozano-Sotomayor P, Greco R, Ballester P, Balanzá V, Kuijt SJ, Meijer AH, Pereira A, Ferrándiz C, de Folter S.

Plant J. 2014 Oct;80(1):69-81. doi: 10.1111/tpj.12617. Epub 2014 Aug 27.

38.

Establishment and optimization of a high throughput setup to study Staphylococcus epidermidis and Mycobacterium marinum infection as a model for drug discovery.

Veneman WJ, Marín-Juez R, de Sonneville J, Ordas A, Jong-Raadsen S, Meijer AH, Spaink HP.

J Vis Exp. 2014 Jun 26;(88):e51649. doi: 10.3791/51649.

39.

Macrophage-pathogen interactions in infectious diseases: new therapeutic insights from the zebrafish host model.

Torraca V, Masud S, Spaink HP, Meijer AH.

Dis Model Mech. 2014 Jul;7(7):785-97. doi: 10.1242/dmm.015594. Review.

40.

Mycobacteria counteract a TLR-mediated nitrosative defense mechanism in a zebrafish infection model.

Elks PM, van der Vaart M, van Hensbergen V, Schutz E, Redd MJ, Murayama E, Spaink HP, Meijer AH.

PLoS One. 2014 Jun 26;9(6):e100928. doi: 10.1371/journal.pone.0100928. eCollection 2014.

41.

Nanoparticles as drug delivery system against tuberculosis in zebrafish embryos: direct visualization and treatment.

Fenaroli F, Westmoreland D, Benjaminsen J, Kolstad T, Skjeldal FM, Meijer AH, van der Vaart M, Ulanova L, Roos N, Nyström B, Hildahl J, Griffiths G.

ACS Nano. 2014 Jul 22;8(7):7014-26. doi: 10.1021/nn5019126. Epub 2014 Jun 24.

PMID:
24945994
42.

The DNA damage-regulated autophagy modulator DRAM1 links mycobacterial recognition via TLR-MYD88 to autophagic defense [corrected].

van der Vaart M, Korbee CJ, Lamers GE, Tengeler AC, Hosseini R, Haks MC, Ottenhoff TH, Spaink HP, Meijer AH.

Cell Host Microbe. 2014 Jun 11;15(6):753-67. doi: 10.1016/j.chom.2014.05.005. Erratum in: Cell Host Microbe. 2014 Jul 9;16(1):141.

43.

Comparative studies of Toll-like receptor signalling using zebrafish.

Kanwal Z, Wiegertjes GF, Veneman WJ, Meijer AH, Spaink HP.

Dev Comp Immunol. 2014 Sep;46(1):35-52. doi: 10.1016/j.dci.2014.02.003. Epub 2014 Feb 20. Review.

PMID:
24560981
44.

Interaction between the GROWTH-REGULATING FACTOR and KNOTTED1-LIKE HOMEOBOX families of transcription factors.

Kuijt SJ, Greco R, Agalou A, Shao J, 't Hoen CC, Overnäs E, Osnato M, Curiale S, Meynard D, van Gulik R, de Faria Maraschin S, Atallah M, de Kam RJ, Lamers GE, Guiderdoni E, Rossini L, Meijer AH, Ouwerkerk PB.

Plant Physiol. 2014 Apr;164(4):1952-66. doi: 10.1104/pp.113.222836. Epub 2014 Feb 14.

45.

Hypoxia inducible factor signaling modulates susceptibility to mycobacterial infection via a nitric oxide dependent mechanism.

Elks PM, Brizee S, van der Vaart M, Walmsley SR, van Eeden FJ, Renshaw SA, Meijer AH.

PLoS Pathog. 2013;9(12):e1003789. doi: 10.1371/journal.ppat.1003789. Epub 2013 Dec 19.

46.

Real-time imaging and genetic dissection of host-microbe interactions in zebrafish.

Meijer AH, van der Vaart M, Spaink HP.

Cell Microbiol. 2014 Jan;16(1):39-49. doi: 10.1111/cmi.12236. Epub 2013 Nov 19. Review.

PMID:
24188444
47.

Parallel deep transcriptome and proteome analysis of zebrafish larvae.

Palmblad M, Henkel CV, Dirks RP, Meijer AH, Deelder AM, Spaink HP.

BMC Res Notes. 2013 Oct 24;6:428. doi: 10.1186/1756-0500-6-428.

48.

MicroRNA-146 function in the innate immune transcriptome response of zebrafish embryos to Salmonella typhimurium infection.

Ordas A, Kanwal Z, Lindenberg V, Rougeot J, Mink M, Spaink HP, Meijer AH.

BMC Genomics. 2013 Oct 10;14:696. doi: 10.1186/1471-2164-14-696.

49.

Robotic injection of zebrafish embryos for high-throughput screening in disease models.

Spaink HP, Cui C, Wiweger MI, Jansen HJ, Veneman WJ, Marín-Juez R, de Sonneville J, Ordas A, Torraca V, van der Ent W, Leenders WP, Meijer AH, Snaar-Jagalska BE, Dirks RP.

Methods. 2013 Aug 15;62(3):246-54. doi: 10.1016/j.ymeth.2013.06.002. Epub 2013 Jun 11.

50.

A zebrafish high throughput screening system used for Staphylococcus epidermidis infection marker discovery.

Veneman WJ, Stockhammer OW, de Boer L, Zaat SA, Meijer AH, Spaink HP.

BMC Genomics. 2013 Apr 15;14:255. doi: 10.1186/1471-2164-14-255.

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